GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001072-TA|BGIBMGA001072-PA|IPR002110|Ankyrin,
IPR013069|BTB/POZ, IPR009072|Histone-fold, IPR000210|BTB
         (1133 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          33   0.042
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    27   2.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   4.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   8.5  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 33.1 bits (72), Expect = 0.042
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 568 RALLSGRPEIVGGIRTLLPPAGL--DATDASGMTVLMKAALAGDDQIVTMLLEAGA 621
           RA++   P++V   R LL   GL  D T+  G+T L  A  A + +I  +LLEAGA
Sbjct: 823 RAVVENVPDMV---RLLLLQGGLRLDCTNDDGLTALQAAVYARNLKITRILLEAGA 875


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 586 PPAGLDATDASGMTVLMKAALAGDDQIVTMLLEAGADPNVET--GGSSAAHCAMPLSPRS 643
           P A   +T A+       AA A    + T  L AGA   V T       A  A P +   
Sbjct: 218 PAANAASTAAAPAAATAHAATASP--VATAALAAGAPATVSTPMDKDDPAAAAAPATAEV 275

Query: 644 PGTHQSNPAYT 654
           PG   +NPA T
Sbjct: 276 PGAVVANPAAT 286


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 582 RTLLPPAGLDAT--DASGMTVLMKAALAGDDQIVTMLLEAGADPNVETGGSSAAHCAMPL 639
           RT+L    +D    ++ G+T L  A L+ +  +  MLL+ GA  N  +  ++ ++  + L
Sbjct: 444 RTILESTDVDVNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGAIENAHSVHAANSNMGLHL 503

Query: 640 S 640
           +
Sbjct: 504 N 504


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 628  GGSSAAHCAMPLSPRSPGTHQSNPAYTPPTAGWTALVYACSG--AGGGGALE 677
            G  S A  +     RSP    SN     PTA   A +   +G   GGGG ++
Sbjct: 1148 GAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPTTGNSKGGGGVVQ 1199


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 957,813
Number of Sequences: 2123
Number of extensions: 32743
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 6
length of query: 1133
length of database: 516,269
effective HSP length: 71
effective length of query: 1062
effective length of database: 365,536
effective search space: 388199232
effective search space used: 388199232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)