Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001071-TA|BGIBMGA001071-PA|undefined
         (419 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    29   0.047
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   2.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   2.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   3.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   5.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   5.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   7.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   7.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   9.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 29.5 bits (63), Expect = 0.047
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 224 EELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVI 260
           EE+  K+ +  NK P LP+T   L   I Q + +VVI
Sbjct: 115 EEVWSKLIETGNKPPTLPVTSIHLRGAIGQRSCQVVI 151


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 116 LFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPS 154
           LF  L    +++ +  D A  +  +   NF KN  PNPS
Sbjct: 442 LFTNLLTPDIEEGSDEDIAVKRFVKLWTNFAKNGNPNPS 480


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 90  SEEQAGPFGMRR--APSTDRVKQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRK 147
           SEE A  +G+++  AP  D    TD +P+  I+ +     V       ++    V   RK
Sbjct: 263 SEEVANIWGLKKVYAPVVDGEFLTD-EPI-AIIKSGDYNHVPMIFGYTTREGMIVEMMRK 320

Query: 148 NETPNPSNVHEKYL 161
           NETP   N  E+++
Sbjct: 321 NETPGMPNDFEEFV 334


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 244 EAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEENQK 285
           +A LAN +  +  +V I+F +   R+  E+K+ +K +E  QK
Sbjct: 186 KAELANSLGLSERQVKIWFQN---RRAKERKQVKKREEVTQK 224


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 78  KSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTD 112
           ++ S  ++Y HP     G   M +  S  RVK T+
Sbjct: 94  EAQSPHRIYMHPESPSKGSHWMNQDISFSRVKLTN 128


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 90  SEEQAGPFGMRR--APSTDRVKQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRK 147
           SEE A  +G+++  AP  D    TD +P+  I        V       ++    V   RK
Sbjct: 263 SEEVANIWGLKKVYAPVVDGEFLTD-EPIATIKSGD-YNHVPMIFGYTTREGMIVEMMRK 320

Query: 148 NETPNPSNVHEKYL 161
           NETP   N  E+++
Sbjct: 321 NETPGMPNDFEEFV 334


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 116 LFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPS 154
           LF  L    +++ +  D A  +  +   NF KN  PNP+
Sbjct: 442 LFTNLLTPDIEEGSDEDIAVKRFVKLWTNFAKNGDPNPT 480


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 116 LFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPS 154
           LF  L    +++ +  D A  +  +   NF KN  PNP+
Sbjct: 442 LFTNLLTPDIEEGSDEDIAVKRFVKLWTNFAKNGDPNPT 480


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 116 LFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNP 153
           LF  L    +++ +  D A  +  +   NF KN  PNP
Sbjct: 441 LFTNLLTPDIEEGSDEDIAVKRFVKLWTNFAKNGDPNP 478


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.130    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,246
Number of Sequences: 317
Number of extensions: 4739
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 419
length of database: 114,650
effective HSP length: 59
effective length of query: 360
effective length of database: 95,947
effective search space: 34540920
effective search space used: 34540920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)