Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001071-TA|BGIBMGA001071-PA|undefined
(419 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 37 0.005
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 33 0.075
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 33 0.099
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 31 0.40
SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription te... 30 0.70
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.92
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 29 1.2
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 29 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.1
SPAC6G9.01c |||conserved protein|Schizosaccharomyces pombe|chr 1... 28 2.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 2.1
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 2.1
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 28 2.8
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 27 3.7
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 3.7
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 3.7
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 27 4.9
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 4.9
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 27 4.9
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 4.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 6.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 6.5
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 27 6.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 8.6
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 26 8.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 26 8.6
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 26 8.6
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 37.1 bits (82), Expect = 0.005
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 249 NKITQNNNKVVIYFGDSIIR-KHNEQKREEKLKEENQKPEAIYVNRFVNETETIGLDNFI 307
NKI + ++V + G I+ + N + +++K+ N + I++ NE+ +
Sbjct: 103 NKIQRQ--RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAA 160
Query: 308 YKADECPTPEIHVSEAIYSEIKYEDPIDDVVTINDATYRKDVFGTISSDGFLVVEFEENF 367
+D C I S + S++ + PI V + + V + + L +E
Sbjct: 161 NSSDSCHLVSIPPSPQLLSDLVNQSPIGQGVVASQNQFEYGVDPNLDVELALALELSMAE 220
Query: 368 ERARQLVELVHGGSSEHHE 386
ERARQ E+ SSE E
Sbjct: 221 ERARQ--EVAAQKSSEETE 237
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 33.1 bits (72), Expect = 0.075
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 28 NKHNMSDNFILKKAEAWEPMKFIRGAARLSVRHWQ--SREPLNS--TKTRMATHKSTSCE 83
N+ +++ LK+ E+ + + G LSV + + + NS T ++ T+ +
Sbjct: 179 NESTLTEGIALKEIESPDKDRKADGIVNLSVTQEEDDNHQSFNSSLTPSQPTTYNRANFF 238
Query: 84 QLYPHPSEEQA-GPFGMRRAPSTDRVKQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSV 142
+ S+ + P +PS R+K D K L + + +K+ + D + K RS
Sbjct: 239 SINDASSDSSSDAPLRTLSSPSRLRMKDNDRKYLVEHSPAALIKESETIDGIDDKSLRSS 298
Query: 143 LNFRKNETPNPSNVHE 158
E+PN +V++
Sbjct: 299 TREVSVESPNEDSVND 314
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 32.7 bits (71), Expect = 0.099
Identities = 23/119 (19%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 109 KQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSA 168
+ +D+ ++ S++K N + + ++ +E PN S +L +PQ +
Sbjct: 100 EDSDYSTFLPVIETSKVKDANHFPPNYPEPKNDSVSSNIDEFPNDSISSASFLSVPQ--S 157
Query: 169 STEHVYSEPRPWNS-QPQYDDCCRPPVYQSVEKKREENKVTNSEKKNMLTNRLPCYEEL 226
+ ++ S+P P N ++ P + V ++ ++ SEK+ ++ RLP ++++
Sbjct: 158 TPPYLVSQPTPLNKFLAGAENVDIPHSLRPVPRREHSSQFQVSEKRTLV--RLPSFDDV 214
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 30.7 bits (66), Expect = 0.40
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 224 EELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEEN 283
EELA K SQE+ L + EA N + V + + +E K KE +
Sbjct: 197 EELANKSSQEEGVDKQLRVVEATEKEHEEDGNEENVTVTKPVEVATDQVESKEVKKKEVS 256
Query: 284 QKPEAIYVNRFVNETETIGLDNFIYKADECPTPEIHVSEAIYSEIKYED 332
+ E V E + +++ + K DE E+H EA +E E+
Sbjct: 257 ETTEPTAPP--VTVAEVLEIEDKVPKVDE--VEEVHSPEAKVTENDVEN 301
>SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription
termination factor Reb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 504
Score = 29.9 bits (64), Expect = 0.70
Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Query: 19 RAADARKPPNKHNMSDNFILKKAEAWEPMKFIRGAARLSVRHWQ--SREPLNSTKTRMAT 76
+ +A + + +D+ ++ +E F++G+AR + HW R N +T
Sbjct: 119 KGVNAMRNSTSNQTNDSILISPSEITNMDPFLKGSARWTAEHWDYLERRMQNFCQTYSLD 178
Query: 77 HK--STSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDH-KPLFKILGNSRLKKVNSTDA 133
H + S + H ++ PS R H + L+ I G + + NS+
Sbjct: 179 HTQVADSLHEKRLHGPLSSLVKLLVQEMPSFTRRTILRHLRALYNIPGYEKYSRKNSSGR 238
Query: 134 AESKVRRSVL 143
+ V+ + +
Sbjct: 239 GDFGVQETAI 248
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.5 bits (63), Expect = 0.92
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 196 QSVEKKREENKV-TNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLA--NKIT 252
+ KKREE ++ EKK R E+ QK ++K KK +A ++
Sbjct: 635 EEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLR 694
Query: 253 QNNNKVVI---YFGDSIIRKHNEQKREEKLKEENQKPE 287
+ K ++ + + ++ E++R E L++E+++ E
Sbjct: 695 EEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKE 732
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 29.1 bits (62), Expect = 1.2
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 11/159 (6%)
Query: 132 DAAESKVRRSVLNFRKNETP---NPSNVHEKYLPLPQMSASTE----HVYSEPRPWNSQP 184
DA E V + N +P NPS + K L LP MS T+ ++ P ++
Sbjct: 107 DANEHSVNSAHSKSSSNASPESLNPSQMMSKRLSLPPMSQFTDSDFVNILRTPFAQSTPL 166
Query: 185 QYDDCCRPPVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTE 244
+ R V K +K S + L ++ +++ K + KK
Sbjct: 167 NRNTSSRNTEMPLVRK----DKPDFSNGHHDLIKQITELQDMLDKARDQARKKSRTVDIL 222
Query: 245 AGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEEN 283
G N++T N + +S + +++ + + LK +N
Sbjct: 223 EGKVNELTHQLNMADSKYNESKVANNSQNNQIKTLKAQN 261
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 103 PSTDRVKQTDH---KPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPSN 155
PSTD+ K+ D+ K K N +K ++T A++SK L +NE P N
Sbjct: 87 PSTDKKKKKDNDDFKQNLKSSSNKTEEKYSATQASKSKNDEFELGGEENEDEMPLN 142
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 135 ESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPWNSQPQYDD 188
E VR +V K + P+ SNVH P+ M+A H RP S P+ D
Sbjct: 1354 EPPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMPSHNAVNARP--SAPERRD 1405
>SPAC6G9.01c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 95
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 146 RKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPWNSQPQYDDCCRPPVYQSVEKKREEN 205
+ N SN + P+ A T+ S P+P N+Q DD P S K+ EE
Sbjct: 11 KANPANEKSNDSKSEAKAPKKGAKTKSTPSRPKPTNNQ---DDLFLDPKGASGRKRTEEG 67
Query: 206 KVTNSEKK 213
+ E++
Sbjct: 68 FLVYDEEE 75
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 244 EAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEENQKPEAIYVNRFVNETETI 301
E G + QN + ++ F S + N+Q+RE++ K EN+K + N T TI
Sbjct: 302 EEGEEKEDAQNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 244 EAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEENQKPEAIYVNRFVNETETI 301
E G + QN + ++ F S + N+Q+RE++ K EN+K + N T TI
Sbjct: 302 EEGEEKEDAQNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 211 EKKNMLTNRLPCYEELAQKISQEKNKKP--------NLPLTEAGLANKITQNNNKV 258
EK ++ N YEE QKI +E+ +K N P AGLA++++ NK+
Sbjct: 422 EKARLIANPFS-YEEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQENKL 476
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 123 SRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYL-PLPQMSASTEH 172
S+++ + E+ S+ N+ + E P N HEK+ PL Q S+ +H
Sbjct: 130 SQVEGRSELSQVENDSLESIGNYDRVEFKRPKNPHEKHFRPLRQRSSVDDH 180
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 224 EELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKE-- 281
E+ K + +K P T++ L + ++N ++ + + R H E KE
Sbjct: 730 EKNGTKTACLSHKDECFPNTDSDLTVLVRYDDNALLAAYSKVVERAHKADTWLENYKEAL 789
Query: 282 --ENQKPEAIYVNRFVNETETI 301
+N +P + +NE ETI
Sbjct: 790 GSDNSRPSLKVLKTLLNEAETI 811
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 3.7
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 195 YQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQK----ISQEKNKKPNLPLTEAGLANK 250
Y+ KKR N + K+ L + E + QK + +EK ++ + K
Sbjct: 59 YEGNRKKRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEK 118
Query: 251 ITQNNNKVVIYFGDSIIRKHNEQKREE----KLKEENQKPEAIYVNRFVNETETIGLDNF 306
I K + IR +Q+R+E KL+E+ + E + + L+NF
Sbjct: 119 IAAKKMKELEKLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQLKLNNF 178
Query: 307 IYKADE 312
K E
Sbjct: 179 FTKGVE 184
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 57 SVRHWQSREPLNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRV 108
S R + R + KTR +T++S E+LY + SEE+ +R D V
Sbjct: 11 SQRFAELRALRQAGKTRASTYESKENEELYDNVSEEEYRKIVRQRLDEDDFV 62
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 27.1 bits (57), Expect = 4.9
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 196 QSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANKITQNN 255
+ V++K EE + ++K + + LP ++LAQ ++K+ N P + +NN
Sbjct: 32 KKVQQKNEELEKKAADK--ISRDELP-EKQLAQSNDKDKHSVSNPPHKTLKSKRQKGKNN 88
Query: 256 NKVVIYFGDSIIRKHNEQKREEKLKEENQKPEA-IYVNRFVNETETIGLDNFIYKADECP 314
++ VI F ++ + + + + K Q P I ++ + FI +
Sbjct: 89 DRKVILFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGRQKGYAFVEFINPKTDVI 148
Query: 315 TPEIHVSEAIYSEIK 329
+ + IY E K
Sbjct: 149 SKALKFHHTIYKERK 163
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.1 bits (57), Expect = 4.9
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 207 VTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANKITQNNN-KVVIY---- 261
V +K N +NR+ E+ + QE PN ++ A+ ++++N IY
Sbjct: 12 VMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGFDE 71
Query: 262 FGDSIIRKHNEQKREEKLKEENQKPE 287
F DS+ EQ ++L+ ++++P+
Sbjct: 72 FYDSMKSAEREQMELKRLESKDRRPK 97
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 196 QSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKK 237
++ E+KR K T +K +++P YE+ +K+ Q KK
Sbjct: 481 ETPEEKRARKKKTKEDKAEKRKSKIPKYEK-KRKLKQSGRKK 521
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 210 SEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANKITQNNNKV 258
S KN L ++ EEL Q+I K++ + L N+ QN +K+
Sbjct: 1320 SRLKNELVSKENLIEELNQEIGHLKSELETVKSKSEDLENERAQNQSKI 1368
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 6.5
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 124 RLKKVNSTDAA---ESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPW 180
+L+K +T + +SK S + + TP ++ HE L SA EH+ S+ +
Sbjct: 400 KLRKKQTTKVSGTPKSKHAGSTQEWHSHTTPRSTSKHENNLNNITNSAKNEHIRSQRQHK 459
Query: 181 NSQPQYDDCCRPPVYQ---SVEKKREENKVTNSEKKNMLTNRLP 221
+ + + SV++KR +K + +N+ + R P
Sbjct: 460 THAAPSKELTKESLSNDQLSVKEKRRHHKKAPTLIQNLNSPRTP 503
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 90 SEEQAGPFGMRRAPSTDRVKQTDHKPLFKILGNSRLKKVNST 131
S+E P RRA S + + K K++GN LK T
Sbjct: 54 SDEDDIPIRKRRASSKKNMSNSSSKKRAKVMGNGGLKNGKKT 95
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 8.6
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 118 KILGNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEP 177
+ L +S+ K NST A+E+ + K P+N + + ST + SE
Sbjct: 16 RALASSQSNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQ--KKTESTGKITSEA 73
Query: 178 RPWNSQPQYDDCCRPPVYQ-SVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNK 236
+Y+ P + SVEKK E TN++ P A++ S + K
Sbjct: 74 ----DTEKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQK 129
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 190 CRPPVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKK 237
C V+ ++ K REENK+ N + ++++A ISQ N K
Sbjct: 895 CSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPNLK 942
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 26.2 bits (55), Expect = 8.6
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 54 ARLSVRHWQSREPLNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDH 113
+R+S H S+E ++ R+A HK + PS RRA + T H
Sbjct: 648 SRISNLHKSSKEKGKDSQVRVALHKENTALNNIVLPSGNLQRSEEKRRAALSG---STWH 704
Query: 114 KPLFKILG 121
P F I G
Sbjct: 705 SPAFNIFG 712
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 26.2 bits (55), Expect = 8.6
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 187 DDCCRPPVYQSVEKKREENKVTN--SEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTE 244
+D R V + + K+ + + N S + L P +EL+ K + +KP + +
Sbjct: 116 EDAQRNTVARILNSKQLSDAIRNINSILEKYLRFLNPDLQELSDKKAVSSTQKPIKTIGK 175
Query: 245 AGLANKITQNNNKV 258
L+NK T N ++V
Sbjct: 176 VDLSNKSTSNQDQV 189
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,131,475
Number of Sequences: 5004
Number of extensions: 99157
Number of successful extensions: 282
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 39
length of query: 419
length of database: 2,362,478
effective HSP length: 75
effective length of query: 344
effective length of database: 1,987,178
effective search space: 683589232
effective search space used: 683589232
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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