Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001071-TA|BGIBMGA001071-PA|undefined
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1468 + 33811471-33811657,33811888-33811980,33812899-338130... 32 0.75
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 32 0.75
06_03_0612 + 22735613-22735643,22735747-22735849,22737154-227375... 31 2.3
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 30 3.0
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434... 30 4.0
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 30 4.0
11_01_0368 + 2800597-2801037,2802282-2802314,2802789-2802876,280... 29 7.0
11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793 29 9.2
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 29 9.2
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 9.2
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 29 9.2
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 29 9.2
>04_04_1468 +
33811471-33811657,33811888-33811980,33812899-33813027,
33813089-33813166,33813377-33813435,33813522-33813644,
33814225-33814282,33814383-33814468,33814564-33814635
Length = 294
Score = 32.3 bits (70), Expect = 0.75
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 215 MLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVIYFGD---SIIRKH- 270
++ +LP E+ + N PNL + E A + N+ +VIY S+I H
Sbjct: 207 VIEGKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMMLVIYLSSLIRSVIALHN 266
Query: 271 ---NEQKREEKLKEENQKPEAI 289
N+ +E K E+ KP AI
Sbjct: 267 LINNKMLNKEHEKAEDSKPTAI 288
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 32.3 bits (70), Expect = 0.75
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 203 EENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKK---PNLPLTEAGLANKITQNNNKVV 259
EE K +NSEKKN + EL + ++ E +K L TE AN + + K+
Sbjct: 171 EEKKKSNSEKKNAEEEKGKVL-ELQRLLNMETHKSEEYKRLSDTERKAANGLRASCEKLR 229
Query: 260 IYFGDSIIRKHNEQKREEKL--KEENQKPEAIYVNRFVNETETIG--LDNFIYKADECPT 315
++ R + K+ E+ + E +K +A + N +++ N I + T
Sbjct: 230 SEASEARERLVAQVKKTEEANKRAEEEKQKAAREKKCANSEKSLAEKNKNLIETERKKLT 289
Query: 316 PEIHVSEAIYSEIKYEDPIDDVVTINDATYRKDVFGTISSDGFLVVEFEENFERARQL 373
E +E ++++++ + +++ + + RK+ + L + EE ER+ L
Sbjct: 290 EEKSRAECLFAKLEEQKKLNEDLRVRIEVERKNAVDQKNHIDHLSQKLEEEKERSENL 347
>06_03_0612 +
22735613-22735643,22735747-22735849,22737154-22737511,
22737592-22738033,22738146-22738189,22738293-22738340
Length = 341
Score = 30.7 bits (66), Expect = 2.3
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 121 GNSRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPW 180
GN + + +NS DAA+SK N +K P+ + V Y P A T++ + +
Sbjct: 233 GNLKPRSLNS-DAAQSKEAAKKDNIQKK--PD-AKVRGSYNRNPAKEAITKNTGKKAKK- 287
Query: 181 NSQPQYDDCCRP----PVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKI 230
+ Q +DC PV E +VTN +K+NM + +P +AQ+I
Sbjct: 288 QVKGQKEDCNGGSEALPVGTEQEPVDVVKEVTNEDKENMGDSEMPMDLGIAQEI 341
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 193 PVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEA----GLA 248
P+ +S +EN V+ +K +R+PC + + + + NLPL+E+
Sbjct: 631 PLVRSKVDGSDENTVSAKVRKPRKRSRIPCEDNVLPGDTSNSSPSMNLPLSESIDAEAAV 690
Query: 249 NKITQNNNK 257
N T N+ K
Sbjct: 691 NTTTANSKK 699
>05_03_0382 +
13342764-13342958,13343178-13343278,13343373-13343459,
13343559-13343709,13343826-13344116,13346058-13346197,
13346276-13346467,13346559-13346631,13346708-13346852,
13347017-13347124,13347213-13347306,13348245-13348324,
13348665-13348738,13349236-13349253
Length = 582
Score = 29.9 bits (64), Expect = 4.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 48 KFIRGAARLSVRHWQSREPLNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDR 107
K + + +LSV ++ E L++ K R T +PS E+A + P +
Sbjct: 364 KNLSPSCKLSVLNFLCDESLSTEKLRSCILSETK------NPSREKAHSAKEKEEPKEET 417
Query: 108 VKQTDHKPLFKILGNSRLKKVNSTDAAESKVRRSVLNFRKNE 149
+K TD L K G + + + ++ K + V N NE
Sbjct: 418 IKNTDEAVLLKTEGAAVAIEEDKNGISQQKDVKEVKNADTNE 459
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 29.9 bits (64), Expect = 4.0
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 150 TPNPSNV-HEKYLPLPQMSASTEHVYSEPRPWNSQPQYDDC-CRPPVY--QSVEKKREEN 205
TP+PS+ H + L L Q + V + P P P D R V E+++++
Sbjct: 134 TPSPSSPQHPRSLGLEQYVELVDSV-AHPPPLPPSPSTADAPSRVEVIAVDDAEERKDDE 192
Query: 206 KVTNSE----KKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLANK 250
+ E K +++ R+P Y+EL + S+ ++ K E LA K
Sbjct: 193 EAREEEEEEVKGSVVVRRVPLYKELYEASSRRRDAKLRTLEFEVRLAEK 241
>11_01_0368 +
2800597-2801037,2802282-2802314,2802789-2802876,
2802984-2803465,2803552-2803818,2803955-2804304,
2804396-2804945
Length = 736
Score = 29.1 bits (62), Expect = 7.0
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 38 LKKAEAWEPMKFIRGAARLSV--RHWQSREPLNSTKTRMATHKSTSCEQLYPHPSEEQAG 95
+++AE WEP++ ++ R R WQ+ + L+ K + KS S P SEE
Sbjct: 109 VQEAEEWEPIRMVKARLREMERRRQWQATDMLHKVKLSL---KSMS---FVPEASEE-VP 161
Query: 96 PFGMRRAPSTDRVKQTDHKPLFKILGNSR--LKKVNSTDAAESKVRRSVLNFRKNETPNP 153
P + + +KQ+ PLF LG R K+ + ++ K + +F +E
Sbjct: 162 PLDLGELLAY-FLKQSG--PLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAF 218
Query: 154 SNVH---EKYLPLPQMSASTEHVYSEPRPWNSQPQYD 187
SN + E L + + ST H Y E WN +Y+
Sbjct: 219 SNDNAGDELDLRIASVVQSTGHNY-EGGFWNDGHKYE 254
>11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793
Length = 783
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 313 CPTPEIHVSEAIY--SEIKYEDPIDDVVTINDATYRKDVFGTIS 354
C T E + S ++ S +ED +DD + + D DVFG+ S
Sbjct: 703 CTTCEGNASTILHPPSGYLFEDDVDDAIEVYDVNAAIDVFGSAS 746
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 11 LCRELQSCRAADARKPPNKHN 31
LC E S R +D K PNKHN
Sbjct: 408 LCFECTSSRNSDQEKSPNKHN 428
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/89 (19%), Positives = 36/89 (40%)
Query: 151 PNPSNVHEKYLPLPQMSASTEHVYSEPRPWNSQPQYDDCCRPPVYQSVEKKREENKVTNS 210
P V +K L + + +H ++ +PQ+ P S++
Sbjct: 144 PPVEEVLQKILQIRSFNKFNQHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAV 203
Query: 211 EKKNMLTNRLPCYEELAQKISQEKNKKPN 239
++ TN+ P ++ Q+ Q++ +KPN
Sbjct: 204 GQQAQTTNQQPPQQQQQQQQQQQQQQKPN 232
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 28.7 bits (61), Expect = 9.2
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Query: 130 STDAAESKVRRSVLNFRKNETPNP-SNVHEKYLPLPQMSASTEHVYSEPRPWNSQPQYDD 188
S A+ S ++S + TP P N + K P A+ + + P+ +++ + D
Sbjct: 15 SASASASTPKKSTATSKDRSTPKPRKNPNPKEEAPPPPPANNKRL--NPQGGSNRKKKAD 72
Query: 189 CCRP---PVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEA 245
P P Q E K ++K SEK + ++ +K +E +K+P +A
Sbjct: 73 AGTPSKKPKRQPPEPKPRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQQA 132
Query: 246 GLANKITQNNNK 257
NK
Sbjct: 133 SAPMSTPSKKNK 144
>01_05_0808 -
25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 208 TNSEKKNMLTNRLPCYEELAQKISQEKNKKPNLPLTEAGLAN-KITQNNNKVVIY----F 262
+N E N+ +PC +E+ +I QE ++ N + E + K+++ V Y F
Sbjct: 741 SNKENNNIEALEVPCADEMQSQILQEYHEFRNENIDEKKASQVKVSKLEESVEYYETPNF 800
Query: 263 GDSIIRKHNEQKREEKLKEENQKPEAIYVNRFVNETE 299
S H E + EK K + E N+ + TE
Sbjct: 801 QKSSSTAHGETETVEKEKMFSFSDELRPQNKNIGITE 837
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,994,001
Number of Sequences: 37544
Number of extensions: 567308
Number of successful extensions: 1198
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 15
length of query: 419
length of database: 14,793,348
effective HSP length: 84
effective length of query: 335
effective length of database: 11,639,652
effective search space: 3899283420
effective search space used: 3899283420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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