GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001071-TA|BGIBMGA001071-PA|undefined
         (419 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          29   0.31 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.7  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    26   1.7  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    26   1.7  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    26   1.7  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    25   3.9  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   5.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   5.1  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    25   5.1  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    24   8.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   8.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 28.7 bits (61), Expect = 0.31
 Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 224 EELAQKISQEKNKKPNLPLTEAGLANKITQNNNKVVI-----YFGDSI---IRKHNEQKR 275
           EE+ +++ +E+N     PL  A   +   Q NNK+++     ++ D +   ++K  +   
Sbjct: 906 EEVKEELGRERNNAGYTPLQLADAKSHTGQGNNKLIVRELLRHYPDGLQKEVKKEVDAAE 965

Query: 276 EEKLKEENQKPE 287
           +++ +EE ++ E
Sbjct: 966 DDEEEEEEEQEE 977


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 27  PNKHNMSDNFILKKAEAWEPMKFIRGAARLSVRHWQSREPLNSTKT 72
           PN H +      + A  W P   +R  + L +RH+     LNS+ +
Sbjct: 146 PNDHLILLGDFNQPALGWSPAAAVRSDSSLPMRHYVPHISLNSSSS 191


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 67  LNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDHKPLFKILGNSRLK 126
           +N    R A   +     LY H S+    P         D +     +PL   LG +  +
Sbjct: 564 VNEFAQRYAEEGNNVYMYLYTHRSKGNPWP-RWTGVMHGDEINYVFGEPLNPTLGYTEDE 622

Query: 127 KVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEH 172
           K  S      K+ R   NF K   PNP+    ++   P+ +A   H
Sbjct: 623 KDFSR-----KIMRYWSNFAKTGNPNPNTASSEFPEWPKHTAHGRH 663


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 67  LNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDHKPLFKILGNSRLK 126
           +N    R A   +     LY H S+    P         D +     +PL   LG +  +
Sbjct: 564 VNEFAQRYAEEGNNVYMYLYTHRSKGNPWP-RWTGVMHGDEINYVFGEPLNPTLGYTEDE 622

Query: 127 KVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEH 172
           K  S      K+ R   NF K   PNP+    ++   P+ +A   H
Sbjct: 623 KDFSR-----KIMRYWSNFAKTGNPNPNTASSEFPEWPKHTAHGRH 663


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 67  LNSTKTRMATHKSTSCEQLYPHPSEEQAGPFGMRRAPSTDRVKQTDHKPLFKILGNSRLK 126
           +N    R A   +     LY H S+    P         D +     +PL   LG +  +
Sbjct: 450 VNEFAQRYAEEGNNVYMYLYTHRSKGNPWP-RWTGVMHGDEINYVFGEPLNPTLGYTEDE 508

Query: 127 KVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEH 172
           K  S      K+ R   NF K   PNP+    ++   P+ +A   H
Sbjct: 509 KDFSR-----KIMRYWSNFAKTGNPNPNTASSEFPEWPKHTAHGRH 549


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 17/67 (25%), Positives = 28/67 (41%)

Query: 123 SRLKKVNSTDAAESKVRRSVLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPWNS 182
           S+ K+V +  +++S   +S +N ++ E  N S V +          ST  V    RP   
Sbjct: 3   SKRKQVLNRSSSKSNFTKSAINRKRPEKSNGSTVKKTIRKRRPALRSTSGVLRAARPERR 62

Query: 183 QPQYDDC 189
               D C
Sbjct: 63  TVLLDAC 69


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 317 EIHVSEAIYSEIKYEDPIDDVVTI 340
           EIHV+E +Y  +  E  ++D VT+
Sbjct: 392 EIHVNEVLYIVVFGESLLNDAVTV 415


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 196 QSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNL 240
           +  E++ E  K+T +EK+  L    P YE + +K  +E +++ NL
Sbjct: 324 ERAEQELERLKITIAEKEKELEQVRPRYEAMRRK-EEECSRELNL 367


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 14/51 (27%), Positives = 19/51 (37%)

Query: 269 KHNEQKREEKLKEENQKPEAIYVNRFVNETETIGLDNFIYKADECPTPEIH 319
           KH  Q  EE+ +   QK   I   R     E    D +     EC   ++H
Sbjct: 182 KHEMQMAEEETQFTYQKKRGIAAERKEARLEKQEADRYASLKQECSEKQVH 232


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 5/124 (4%)

Query: 181 NSQPQYDDCCRPPVYQSVEKKREENKVTNSEKKNMLTNRLPCYEELAQKISQEKNKKPNL 240
           N Q Q     +    Q  +++ ++   T   ++   T +     +  Q+  Q    +P  
Sbjct: 284 NQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQP-- 341

Query: 241 PLTEAGLANKITQNNNKVVIYFGDSIIRKHNEQKREEKLKEENQKPEAIYVNRFVNET-E 299
           P     L  +  Q   +  +  G S  ++  +Q ++++ K +  KPE I ++   NET E
Sbjct: 342 PQMRQQLQQQQQQRQPQRYVVAGSS--QQQQQQHQQQQQKRKRPKPELIEISPGQNETFE 399

Query: 300 TIGL 303
           ++ L
Sbjct: 400 SVSL 403


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 244 EAGLANKITQNNNKVVIYFGDSIIRK-HNEQKREEKLKEENQKPEAIYVNRFVNETETIG 302
           E  L N  T ++   +I  G+  ++  H   + +EK K+  +K  AIY     N+ + I 
Sbjct: 588 ETILKNPATSSDAYSLIALGNFWLQSLHQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIW 647

Query: 303 LDNFI 307
             N I
Sbjct: 648 AANGI 652


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 167 SASTEHVYSEPRPWNSQPQYDDCCRPPVYQSVEKKREENKVTN 209
           SAST HV    + + S  Q  D  + P Y    K   +N++ N
Sbjct: 24  SASTNHVQQLMKVFRSMTQNFDYTKKPSYLQRAKYGVQNQLRN 66


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 319 HVSEAIYSEIKYEDPIDDVVTINDATYRKDVFGTISSDGFLVV 361
           ++ + +   ++   P+D +  +    Y  D FGTI     LVV
Sbjct: 140 YLDQVVKETLRMYPPVDFLFRVASNDYPIDGFGTIPQGTLLVV 182


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 142 VLNFRKNETPNPSNVHEKYLPLPQMSASTEHVYSEPRPWNSQP 184
           V N    ETP P  + E   PL Q    T+     P   ++QP
Sbjct: 262 VPNIPNTETPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQP 304


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,646
Number of Sequences: 2123
Number of extensions: 19155
Number of successful extensions: 94
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 14
length of query: 419
length of database: 516,269
effective HSP length: 66
effective length of query: 353
effective length of database: 376,151
effective search space: 132781303
effective search space used: 132781303
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)