Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001070-TA|BGIBMGA001070-PA|IPR005225|Small GTP-binding
protein domain, IPR006689|ARF/SAR superfamily,
IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1,
IPR003579|Ras small GTPase, Rab type
(164 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 197 8e-52
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 186 1e-48
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 134 5e-33
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 100 9e-23
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 52 4e-08
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 46 4e-06
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 45 5e-06
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 45 5e-06
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 38 7e-04
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 38 7e-04
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 38 7e-04
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 36 0.002
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 35 0.005
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 35 0.005
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 35 0.007
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.11
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 31 0.11
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 30 0.20
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 30 0.20
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 29 0.35
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 27 1.4
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 3.2
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 25 5.6
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 25 7.4
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 7.4
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 25 7.4
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 7.4
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 24 9.8
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 24 9.8
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 24 9.8
SPBP8B7.04 |mug45||sequence orphan|Schizosaccharomyces pombe|chr... 24 9.8
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 197 bits (480), Expect = 8e-52
Identities = 92/161 (57%), Positives = 119/161 (73%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60
MRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNVE V Y+N+ F VWD+GGQ IRP
Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPL 77
Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120
WR Y+ NT II+VVDS DR+RI + +EL ML E+EL +A+L+V ANKQD+ + A
Sbjct: 78 WRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAA 137
Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQ 161
E+ LGL +LR R + I T A G+GL + ++WLS L+
Sbjct: 138 EITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNLK 178
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 186 bits (453), Expect = 1e-48
Identities = 85/157 (54%), Positives = 116/157 (73%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60
MRIL+LGLD AGKTTILYKL++ + V TIPT+GFNVE VTYKN+KF VWD+GGQ IRP
Sbjct: 22 MRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPL 81
Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120
WR Y+ T +I+VVDSAD +RI ++ EL ++ + E+ + +L+VLANKQD+ G L+ A
Sbjct: 82 WRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPA 141
Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLS 157
++ L LD L+DR + + T A+ G+GL + + WLS
Sbjct: 142 QITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLS 178
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 134 bits (325), Expect = 5e-33
Identities = 65/164 (39%), Positives = 104/164 (63%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60
+R+L+LGLD AGKTTIL L +V PT GF + + + L+F +WD+GGQ ++R +
Sbjct: 17 VRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNF 76
Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120
W+ Y+ +T+AII+VVDS D R+ ++ L +L EE+L ++VLANK D++G L+
Sbjct: 77 WKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSE 136
Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164
E+ + L + + ++IF SA+ G + A+ WL+N L+ K
Sbjct: 137 EISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLKEIK 180
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 100 bits (240), Expect = 9e-23
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW 61
++L LGLD AGKTT+L+ L+ + PT+ E++ N++F +DLGG R W
Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLW 81
Query: 62 RCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAE 121
R Y+ + I+Y+VD D +R+ SK EL +L EELA ++L NK D G ++ E
Sbjct: 82 RDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDE 141
Query: 122 VHQALGLDALRD----------RTFQIFKTSAVRGEGLDQAMDWLS 157
+ ALGL R ++F S V +G + WL+
Sbjct: 142 LKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYGEGFKWLA 187
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 52.0 bits (119), Expect = 4e-08
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQVTY----KNLKFQVWDLGGQTS 56
++L++G G GK+ +L + + I TIG + + T+ K +K Q+WD GQ
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLR-EEELANAILVVLANKQDMAG 115
R YY II V D D+D K L + R E N +LV NK DM
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLV--GNKSDM-- 125
Query: 116 CLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQAR 163
+ V ++ + +TSA ++QA +S ++ R
Sbjct: 126 -VDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKER 172
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 45.6 bits (103), Expect = 4e-06
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 2 RILILGLDGAGKTTILYKLQVGEV-VTTIPTIG--FNVEQVTYKN--LKFQVWDLGGQTS 56
+ +++G G GK+ +L + E + + TIG F + N +K Q+WD GQ
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116
R YY + V D + + + LRE +N +++++ NK D+
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFD-NVGRWLKELREHADSNIVIMLVGNKTDLLH- 129
Query: 117 LTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQA 152
L +A A + +F +TSA+ +++A
Sbjct: 130 LRAVSTEEAQAFAAENNLSF--IETSAMDASNVEEA 163
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 45.2 bits (102), Expect = 5e-06
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIP-TIGFN-VEQVTY---KNLKFQVWDLGGQTS 56
+++ LG GKT+++ + + T TIG + + + Y + ++ Q+WD GQ
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 72
Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116
R Y ++ I V D + + ++ ++ + +R E + I+V++ NK D+A
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSF-VNTEKWIEDVRAERGDDVIIVLVGNKTDLA-- 129
Query: 117 LTVAEVHQALGLDALRDRTFQIFKTSAVRGEGL 149
+V Q G ++ +TSA G +
Sbjct: 130 -DKRQVTQEEGEKKAKELKIMHMETSAKAGHNV 161
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 45.2 bits (102), Expect = 5e-06
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 9/169 (5%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVE----QVTYKNLKFQVWDLGGQT 55
+++L++G G GK+ +L + + I TIG + + ++ K +K Q+WD GQ
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 56 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAG 115
R YY I+ + D D+ + + + + N +++ NK D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSN-VEQHASENVYKILIGNKCD--- 125
Query: 116 CLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164
C +V G + + + SA +D+A L+ ++ +K
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQK 174
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 37.9 bits (84), Expect = 7e-04
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 9/162 (5%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIP-TIG--FNVEQVTY--KNLKFQVWDLGGQT 55
++++ILG G GKT+I+ + + TIG F ++V K + Q+WD GQ
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 56 SIRPYWRCYYGNTDAIIYVVD---SADRDRIGISKDELVHMLREEELANAILVVLANKQD 112
+ +Y D + V D S + + +DE + ++L NK D
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVD 128
Query: 113 MAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMD 154
+ + +AL R F+TSA + +A +
Sbjct: 129 VEEQKRMVSKSKALAFCQARGE-IPYFETSAKEAINVQEAFE 169
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 37.9 bits (84), Expect = 7e-04
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 1 MRILILGLDGAGKTTILYKL-------QVGEVV-----TTIPTIGFNVEQVTYKNLKFQV 48
++I++ G G GK+ +L + QV V + I ++G +Q K +K Q+
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQ---KRIKLQI 66
Query: 49 WDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE-EELA-NAILVV 106
WD GQ R R YY + V D ++D S +EL L + +A + I VV
Sbjct: 67 WDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKD----SFEELSSWLSDIRAMAPSTICVV 122
Query: 107 LA-NKQDM 113
LA +K D+
Sbjct: 123 LAGSKSDL 130
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 37.9 bits (84), Expect = 7e-04
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIP-TIG--FNVEQVTY--KNLKFQVWDLGGQT 55
++++ILG G GKT ++ + + TIG F + V K + Q+WD GQ
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 56 SIRPYWRCYYGNTD--AIIY-VVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 112
+ +Y D I+Y V +S D + + E ++ ++E A ++V N+ D
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIV-GNQID 127
Query: 113 MAGCLTVAEVHQAL 126
+H+AL
Sbjct: 128 KDASKRAVSLHRAL 141
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 36.3 bits (80), Expect = 0.002
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 43 NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANA 102
++K ++WD GQ + YY N + I V D + +K + + R+
Sbjct: 63 SVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAP-EGI 121
Query: 103 ILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160
++ + NK D+A E A A + F F+TSA E +++ ++ L
Sbjct: 122 VIALAGNKLDLAQERRAVEKADAEAYAAEANLLF--FETSAKTAENVNELFTAIAKKL 177
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 35.1 bits (77), Expect = 0.005
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 31 TIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDR 82
T+G + T +L+ +++D+GGQ + R W + N ++II+ V D D+
Sbjct: 179 TLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDK 230
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 35.1 bits (77), Expect = 0.005
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 16/166 (9%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVE----QVTYKNLKFQVWDLGGQTS 56
+++++G G GKTT + + GE I T+G V + + F VWD GQ
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE--EELANAILVVLANKQDMA 114
+ YY I + D R I+ + H R+ N +V+ NK D+
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSR----ITYKNVPHWWRDLVRVCENIPIVLCGNKVDVK 126
Query: 115 GCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160
+A + R + Q + SA ++ WL+ L
Sbjct: 127 -----ERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 34.7 bits (76), Expect = 0.007
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 3 ILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW--DLGGQTSIRPY 60
+ ++G +GKT++ +L E TT+P+I N E V K+ W DL G + +
Sbjct: 40 VFLIGPSDSGKTSLFCELIYKEKKTTVPSIEPN-EAV----WKYGAWLVDLPGHPRAKRW 94
Query: 61 WRCYYG---NTDAIIYVVDSA--DRD--RIGISKDELVHMLREEELANAILVVLANKQDM 113
+ N A+++V++SA DRD +G+ + + R+ + + L++ NK D+
Sbjct: 95 ITTKFSGNYNVKAVVFVLNSATIDRDVHEVGLMLFDTILKCRKHHVPH--LLIACNKFDL 152
Query: 114 AGCLTVAEVHQAL 126
++ Q L
Sbjct: 153 FTAQPAEKIQQLL 165
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 30.7 bits (66), Expect = 0.11
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MRILILGLDGAGKTTILYKLQVG---EVVTTIPTIGFNVEQVTYKN--LKFQVWDLGGQT 55
+++ ++G GKT+++ G E T + F + ++ +N + F +WDLGGQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 56 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 88
+ AI+++ D + + + K+
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE 103
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 30.7 bits (66), Expect = 0.11
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQ---VTYKNLKFQVWDLGGQTSI 57
+I+ILG AGKT++L G PTI N V +++ +WD GQ
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 58 RPYWRCYYGNTDAII--YVVDSAD 79
Y +T I+ + VDS D
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRD 98
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.9 bits (64), Expect = 0.20
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 2 RILILGLDGAGKTT---ILYKLQVGEVVTTI-PTIGFNVEQVTYK-NLKFQVWDLGGQTS 56
++L++G G+GK++ I++ V + + TI V + NL +WD GGQ +
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQEA 63
Query: 57 IRPYWRC-----YYGNTDAIIYVVDSADRD 81
+ + N +IYV D R+
Sbjct: 64 FMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.9 bits (64), Expect = 0.20
Identities = 13/25 (52%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVV 26
R+ ILG +GAGK+T++ K+ +GEV+
Sbjct: 721 RVAILGPNGAGKSTLI-KVLIGEVI 744
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 29.1 bits (62), Expect = 0.35
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIPTI 32
RI ++G +GAGK+T++ K+ GE++ T+ I
Sbjct: 702 RIAVIGPNGAGKSTLI-KVLTGELLPTVGEI 731
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 40 TYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 76
TY + ++ + Q++ Y R YYGN IY +D
Sbjct: 812 TYVMILRLIYGIVDQSAFEDYLRFYYGNKAYKIYTID 848
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTI 32
+R++I G G GK++++ L + VT+IP +
Sbjct: 4 VRVVICGDQGVGKSSLISALIQEDNVTSIPKV 35
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 5 ILGLDGAGKTTILYKLQVGEVVTTIPTIGF 34
I+ LDG G T +L K V PT F
Sbjct: 275 IMALDGVGTTALLVKASVHRDGALFPTFPF 304
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 7.4
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 26 VTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVV 75
V IP IG N YKN+K ++ + I ++R Y N II V+
Sbjct: 256 VNRIPGIGHN-----YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVM 300
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 2 RILILGLDGAGKTTILYKLQVGE 24
R L++G +GAGK+T+L KL G+
Sbjct: 32 RTLLVGANGAGKSTLL-KLLSGK 53
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 24.6 bits (51), Expect = 7.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 3 ILILGLDGAGKTTILYKL 20
I+++GL G+GKTT KL
Sbjct: 104 IMMVGLQGSGKTTTCSKL 121
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 24.6 bits (51), Expect = 7.4
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 3 ILILGLDGAGKTTI 16
I+++G+ GAGKTTI
Sbjct: 866 IILIGMRGAGKTTI 879
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 1 MRILILGLDGAGKTTILYKLQV 22
+++L+LG +GKTTI+ ++++
Sbjct: 75 IKVLLLGAGDSGKTTIMKQMRL 96
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 3 ILILGLDGAGKTTILYKL 20
I+++G+ G+GKTT + +L
Sbjct: 11 IIVVGMAGSGKTTFMQQL 28
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 48 VWDLGGQTSIRPYWRCYYGNTDAIIY 73
+W G+ I +W +Y NT I +
Sbjct: 1100 IWKTFGEIHIEDFWLPFYANTTNITH 1125
>SPBP8B7.04 |mug45||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 63 CYYGNTDAIIYVVDSADRDRIGISKDELVH 92
C YGNT +I V + + IS+ + H
Sbjct: 246 CTYGNTSSIFQVKNEMSNIKSAISEGYIAH 275
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,196
Number of Sequences: 5004
Number of extensions: 24214
Number of successful extensions: 118
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 87
Number of HSP's gapped (non-prelim): 33
length of query: 164
length of database: 2,362,478
effective HSP length: 68
effective length of query: 96
effective length of database: 2,022,206
effective search space: 194131776
effective search space used: 194131776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)
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