BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001070-TA|BGIBMGA001070-PA|IPR005225|Small GTP-binding protein domain, IPR006689|ARF/SAR superfamily, IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1, IPR003579|Ras small GTPase, Rab type (164 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 208 1e-54 SB_56255| Best HMM Match : Arf (HMM E-Value=0) 208 2e-54 SB_11310| Best HMM Match : Arf (HMM E-Value=0) 187 5e-48 SB_53421| Best HMM Match : Arf (HMM E-Value=0) 184 4e-47 SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 163 5e-41 SB_37042| Best HMM Match : Arf (HMM E-Value=0) 144 3e-35 SB_57342| Best HMM Match : Arf (HMM E-Value=0) 129 1e-30 SB_18358| Best HMM Match : Arf (HMM E-Value=0) 124 3e-29 SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 6e-27 SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 111 3e-25 SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 105 1e-23 SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21 SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 81 3e-16 SB_214| Best HMM Match : Arf (HMM E-Value=0) 75 2e-14 SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 72 2e-13 SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 4e-11 SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 57 8e-09 SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08 SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08 SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 49 2e-06 SB_4971| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06 SB_27557| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06 SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05 SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05 SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05 SB_10811| Best HMM Match : Ras (HMM E-Value=0) 44 5e-05 SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05 SB_50855| Best HMM Match : Ras (HMM E-Value=0) 44 8e-05 SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04 SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 43 1e-04 SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04 SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04 SB_13045| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04 SB_44625| Best HMM Match : Ras (HMM E-Value=0) 41 4e-04 SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 40 8e-04 SB_28695| Best HMM Match : Ras (HMM E-Value=0) 40 0.001 SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003 SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007 SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007 SB_54971| Best HMM Match : Ras (HMM E-Value=0) 36 0.022 SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 36 0.022 SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 35 0.029 SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.038 SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.067 SB_47462| Best HMM Match : Ras (HMM E-Value=0) 33 0.12 SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.20 SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 32 0.20 SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 31 0.36 SB_7589| Best HMM Match : Ras (HMM E-Value=0) 31 0.47 SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 0.47 SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 31 0.62 SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1 SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 30 1.1 SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 30 1.1 SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 1.4 SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 1.9 SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 1.9 SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 2.5 SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 29 2.5 SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_36331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3 SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3 SB_28290| Best HMM Match : DUF156 (HMM E-Value=3.3) 28 3.3 SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4 SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 27 5.8 SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 27 7.6 SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 27 7.6 SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 27 7.6 SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6 >SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 179 Score = 208 bits (509), Expect = 1e-54 Identities = 95/160 (59%), Positives = 125/160 (78%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60 MRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPL 77 Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120 WR Y+ NT +IYVVDS DR+R+ SK+EL ML+E+EL +A+++V+ANKQD+ L+V+ Sbjct: 78 WRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNALSVS 137 Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160 E+ + LGL ++RDR + I A +G GL + +DWLSN L Sbjct: 138 EITEKLGLQSIRDRQWYIQAACATQGTGLYEGLDWLSNEL 177 >SB_56255| Best HMM Match : Arf (HMM E-Value=0) Length = 181 Score = 208 bits (507), Expect = 2e-54 Identities = 94/164 (57%), Positives = 126/164 (76%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60 MRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77 Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120 WR Y+ NT +I+VVDS DR+R+G +++EL ML E+EL +A+L+V ANKQD+ + A Sbjct: 78 WRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAA 137 Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164 E+ LGL +LR+R + I T A G+GL + +DWLSN L++++ Sbjct: 138 EITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKSKQ 181 >SB_11310| Best HMM Match : Arf (HMM E-Value=0) Length = 255 Score = 187 bits (455), Expect = 5e-48 Identities = 87/164 (53%), Positives = 118/164 (71%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60 +R+L++GLD AGKTTILY L++ E V TIPTIGFNVE V YKN+KF VWD+GGQ IR Sbjct: 91 LRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLL 150 Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVA 120 WR Y+ T +I+VVDS DRDRI +K+EL +L+EEEL A L+VLANKQD+ ++ Sbjct: 151 WRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPDSMSTT 210 Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164 E+ + L L LR R + I T A++G+G+ + ++WL+ +Q RK Sbjct: 211 ELSEKLSLHTLRSRNWYIQATCALKGQGVYEGLEWLAQQIQLRK 254 >SB_53421| Best HMM Match : Arf (HMM E-Value=0) Length = 625 Score = 184 bits (447), Expect = 4e-47 Identities = 83/160 (51%), Positives = 116/160 (72%) Query: 5 ILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCY 64 ++GLD AGKTTILY+L++ EVV+T+PT+GFNVE VTYKN+ F VWD+GGQ IR WR Y Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60 Query: 65 YGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQ 124 Y II+VVDSADR+R +++EL +L EEEL IL+V+ANKQDMA +T +E+ + Sbjct: 61 YQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIRE 120 Query: 125 ALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164 L L+ +R R + + AV+GEGL + +DW++ ++ K Sbjct: 121 KLKLNEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRNNK 160 >SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) Length = 257 Score = 163 bits (397), Expect = 5e-41 Identities = 74/103 (71%), Positives = 87/103 (84%) Query: 53 GQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 112 GQTSIRPYWRCYY NTDA+IYVVDS D+DRIGISK EL+ ML E+EL AIL+V ANKQD Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214 Query: 113 MAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDW 155 M G ++ +EV ALGL AL+ RT+ IFKTSAV+GEGLD+AM+W Sbjct: 215 MEGAMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257 >SB_37042| Best HMM Match : Arf (HMM E-Value=0) Length = 188 Score = 144 bits (349), Expect = 3e-35 Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 1/155 (0%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRP 59 +RI++LGLD AGKTTILYKL++ E V+TIPTIGFNVE + KN+ +WD+GGQ IRP Sbjct: 20 VRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRP 79 Query: 60 YWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTV 119 WR Y+ T+ +++VVDS+D R+ +K+EL +L +E + +VV+ANKQD+ L Sbjct: 80 LWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNALKA 139 Query: 120 AEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMD 154 E+ + LGL + + + + A G+GL +AMD Sbjct: 140 GEMAKHLGLLQHKRNPWHVQEACATNGDGLYEAMD 174 >SB_57342| Best HMM Match : Arf (HMM E-Value=0) Length = 457 Score = 129 bits (311), Expect = 1e-30 Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Query: 13 KTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 71 KTTILYKL++ E V T+PT+ FNVE ++ KN+ F VWD+GGQ IR WR Y+ + I Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181 Query: 72 IYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGLDAL 131 I+VVDSAD++RI ++EL +L+ EL +VV+ANKQD+ G + ++ + L L Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKH 241 Query: 132 RDRTFQIFKTSAVRGEGLDQAMDWLS 157 ++I T A G+GL +AM+ L+ Sbjct: 242 TKNPWRIQGTCATAGDGLYEAMEALA 267 >SB_18358| Best HMM Match : Arf (HMM E-Value=0) Length = 214 Score = 124 bits (300), Expect = 3e-29 Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 2/160 (1%) Query: 3 ILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYW 61 +++LGLD +GKT+ILY+ + E V T+PT FNVE + +K ++F+VWD+GG+ RP W Sbjct: 24 VVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLW 83 Query: 62 RCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAE 121 + Y TDA+IYVVDS ++ ++DEL ++L +L A +++ ANKQD + E Sbjct: 84 KAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPNAIPPRE 143 Query: 122 VHQALGLDALRDR-TFQIFKTSAVRGEGLDQAMDWLSNAL 160 + L L L R + + SA+ GEGL + LS + Sbjct: 144 ITHMLSLHDLNARHLWFVQPCSALLGEGLLDGLRALSEMI 183 >SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1325 Score = 117 bits (281), Expect = 6e-27 Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 19/165 (11%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYK-NLKFQVWDLGGQTSIRP 59 MRIL+LGLD +GKTTIL L +V+ PT GFN++ V K + VWD+GGQ IRP Sbjct: 18 MRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRP 77 Query: 60 YWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTV 119 YW+ Y+ NTD + EL +L EE+L L+V ANKQD+ T Sbjct: 78 YWKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVFANKQDLMNAATP 120 Query: 120 AEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164 AE+ LGL+ +R R +QI SA+ GEG+ Q D S L A K Sbjct: 121 AEISSNLGLNTIRSRGWQIQGCSALTGEGV-QHSDEYSAILAAVK 164 >SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) Length = 650 Score = 111 bits (267), Expect = 3e-25 Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPY 60 R L DG+ ++ Q + + P GFNVE V YKN+ F VWD+GGQ IRP Sbjct: 467 RFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNISFTVWDVGGQDKIRPL 526 Query: 61 WRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQ 111 WR Y+ NT +I+VVDS DR+R G +K+EL ML E+EL +A+L+V ANKQ Sbjct: 527 WRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAVLLVFANKQ 577 >SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) Length = 260 Score = 105 bits (253), Expect = 1e-23 Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRP 59 M + ++GL +GKTT + + G+ IPT+GFN+ +V+ N+ +VWD+GGQ R Sbjct: 21 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTIKVWDIGGQPRFRS 80 Query: 60 YWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTV 119 W Y + I+Y+VD+AD D++ SK+EL ++L + +LA ++VL NK+D+ L Sbjct: 81 MWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLPNSLDE 140 Query: 120 AEVHQALGLDALRDRTFQIFKTS 142 E+ + L L +++DR + S Sbjct: 141 KELVERLNLTSVQDREICCYSIS 163 >SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 487 Score = 98.7 bits (235), Expect = 2e-21 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 2 RILILGLDGAGKTTILYKLQVGEVV---TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIR 58 RIL+LGLDG+GK+ L L G+ +T T GFNV +T L +W++GG R Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEKYR 227 Query: 59 PYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLT 118 YW + +T ++YVVDS+D DR S+D L +L L ++++A+KQD+ G Sbjct: 228 AYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGARQ 287 Query: 119 VAEVHQALGLD 129 ++E+ LG++ Sbjct: 288 LSEIVSVLGIN 298 >SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) Length = 334 Score = 81.4 bits (192), Expect = 3e-16 Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 4/122 (3%) Query: 42 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 101 KN+ F VWD+GGQ ++R ++ + + +IYVVDS D R+ ++ +L+ +L+E+ + + Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRL--NEAQLLGILQEKVMVD 71 Query: 102 AILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQ 161 +VV+ANKQD+ L ++ + LGL L+ + + A G+GL +A WL N+ Sbjct: 72 VPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKWLPNSRV 131 Query: 162 AR 163 +R Sbjct: 132 SR 133 >SB_214| Best HMM Match : Arf (HMM E-Value=0) Length = 148 Score = 75.4 bits (177), Expect = 2e-14 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 12/141 (8%) Query: 29 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 88 +PT+ E+++ ++F +DLGG R W+ Y+ + I++++D AD +R+ SK Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64 Query: 89 ELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGL------------DALRDRTF 136 EL +L +E+L++ +++L NK D+ G + + Q GL L R Sbjct: 65 ELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGSVAAKDLATRPM 124 Query: 137 QIFKTSAVRGEGLDQAMDWLS 157 ++F S ++ EG + WLS Sbjct: 125 ELFMCSVLKREGYGEGFRWLS 145 >SB_7588| Best HMM Match : DcpS (HMM E-Value=0) Length = 446 Score = 72.1 bits (169), Expect = 2e-13 Identities = 29/64 (45%), Positives = 45/64 (70%) Query: 50 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLAN 109 D+GGQ IRP WR Y+ + +I+VVD ADRDRI ++ EL ++ + E+ + I+++ AN Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202 Query: 110 KQDM 113 KQD+ Sbjct: 203 KQDL 206 >SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 255 Score = 64.5 bits (150), Expect = 4e-11 Identities = 28/53 (52%), Positives = 38/53 (71%) Query: 45 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREE 97 K +WD+GGQ S+R YWR Y+ +TD +I+VVDSAD+ R+ K EL +L EE Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55 >SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) Length = 259 Score = 56.8 bits (131), Expect = 8e-09 Identities = 23/50 (46%), Positives = 33/50 (66%) Query: 19 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 68 K+++ V + GFNVE V +++LKF +WD+GG +RP WR YY NT Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257 >SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 132 Score = 55.2 bits (127), Expect = 3e-08 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 19/118 (16%) Query: 3 ILILGLDGAGKTTIL--YKLQVGEVVTTIP------TIGFNVEQVTYKNLKFQVWDLGGQ 54 ILILGLD AGKTT+L K + + IP T+G N+ ++T ++K WDLGGQ Sbjct: 24 ILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITISHVKLMFWDLGGQ 83 Query: 55 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 112 +R W D + + R ++ L H + L L+VLANKQD Sbjct: 84 QELRTLW-------DKVEVMSVKILMTRFLPVEEALTH----KALEGVPLLVLANKQD 130 >SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 271 Score = 54.8 bits (126), Expect = 3e-08 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 8/165 (4%) Query: 2 RILILGLDGAGKTTILYKLQVGEVV-----TTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 56 ++L++G G GKT+++ + G T +G V + +K Q WD GQ Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116 R + YY N DA+I V D +R L+++ + N + V++ NK D+ G Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN-KNILKVLVGNKTDLKGA 131 Query: 117 LTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQ 161 A L + + +TSA + ++ + L+ L+ Sbjct: 132 SRKVNTRSAANLAEFEELLY--LETSAKWDDNVEVLIAELAEQLR 174 >SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) Length = 212 Score = 48.8 bits (111), Expect = 2e-06 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVT-TIPTIGFN----VEQVTYKNLKFQVWDLGGQTS 56 ++++LG G GKT++ Y+L+ TIG + ++ K + VWD G Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLR--EEELANAILVVLANKQDMA 114 R + YY A I + + D S L+H + +E +A+ V++ANK D+ Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPG----SLQYLLHWIHDTDEFCPDALKVLVANKIDLD 128 Query: 115 GCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160 +T V L A F+ SA GEG+ +A ++ AL Sbjct: 129 EQVTTESVE----LFASSHECHLTFRISAKTGEGIGKACTQIAKAL 170 >SB_4971| Best HMM Match : Ras (HMM E-Value=0) Length = 209 Score = 48.8 bits (111), Expect = 2e-06 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 6/123 (4%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVEQVTY--KNLKFQVWDLGGQTS 56 ++L++G G GK+++L + T I TIG F + +T K +K Q+WD GQ Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116 R YY + I+ + D + + + + + + E +++ NK D+ C Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETF-LHLSQWLEEVSEYACEGVNTILVGNKCDLIDC 128 Query: 117 LTV 119 V Sbjct: 129 RQV 131 >SB_27557| Best HMM Match : Ras (HMM E-Value=0) Length = 184 Score = 47.6 bits (108), Expect = 5e-06 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 2 RILILGLDGAGKTTILYKLQVGEVV-TTIPTIG--FNVEQVTYKN---LKFQVWDLGGQT 55 RI+++G GK+++L + G+ + PT+G F+V + K +K Q+WD GQ Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74 Query: 56 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 112 R YY NT + + D +RD D + E A + +++ +K D Sbjct: 75 RFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKID 131 >SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 44.4 bits (100), Expect = 5e-05 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 6/118 (5%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVEQVTY--KNLKFQVWDLGGQTS 56 +I+++G GKT ++ + G PTIG F ++ V + +K Q+WD GQ Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMA 114 R + YY N D +I D ++ S + + + ++ ++ NK D++ Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFE-SLPQWLDDTNRYTSKDVLIAIVGNKSDLS 125 >SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 44.4 bits (100), Expect = 5e-05 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 86 SKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVR 145 +K +LV ++ EL A L++LANKQD+ G ++VAE+ + L L ++D + I + +R Sbjct: 35 NKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNLACIKDHGWHI-QRIVIR 93 Query: 146 GEGLDQAMDWLSNAL 160 D+ M +S L Sbjct: 94 RIIADKLMSDISRTL 108 >SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 765 Score = 44.4 bits (100), Expect = 5e-05 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 27 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 85 T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V + D + Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSAYDLVLA 235 Query: 86 SKDELVHMLREEELANAI 103 +E+ M+ +L ++I Sbjct: 236 EDEEMNRMMESMKLFDSI 253 >SB_10811| Best HMM Match : Ras (HMM E-Value=0) Length = 304 Score = 44.4 bits (100), Expect = 5e-05 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%) Query: 33 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVH 92 G + V K++K Q+WD GQ R R YY + V D + R+ + L Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD 192 Query: 93 MLREEELANAILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQ 151 R N +++++ NK+D+ V + + ++ +TSA+ GE +++ Sbjct: 193 -ARTLASPNIVIILVGNKKDLDADREVTFLEAS---RFAQENELMFLETSALTGENVEE 247 >SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 265 Score = 44.0 bits (99), Expect = 6e-05 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVT-TIPTIGFNV-EQVTYKN---LKFQVWDLGGQTS 56 +I+I+G GKT + Y+L G+ T TIG + E+ N +K Q+WD GQ Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107 Query: 57 IRPYWRC-YYGNTDAIIYVVD 76 R C YY N +A++++ D Sbjct: 108 FRKSMVCHYYRNVNAVVFMYD 128 >SB_50855| Best HMM Match : Ras (HMM E-Value=0) Length = 733 Score = 43.6 bits (98), Expect = 8e-05 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 6/118 (5%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVT-TIPTIG--FNVEQVTYKN--LKFQVWDLGGQTS 56 ++++LG GK++++ + G+ TIG F + V + +KF++WD GQ Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMA 114 YY A I V D ++D +K V L+ + N ++ + NK D+A Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIVIALSGNKADLA 139 >SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 919 Score = 43.2 bits (97), Expect = 1e-04 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVEQVTYKN--LKFQVWDLGGQT 55 ++ILI+G G GK+++L + I TIG F V+ +T + K +WD GQ Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68 Query: 56 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEEL 99 R YY +I V D+ R+ D+L L E E+ Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETF----DKLEEWLNEVEM 108 >SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) Length = 315 Score = 43.2 bits (97), Expect = 1e-04 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 27 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 86 T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + + Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LSLE 236 Query: 87 KDELVHMLRE 96 +DE + + E Sbjct: 237 EDESTNRMEE 246 >SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 365 Score = 42.3 bits (95), Expect = 2e-04 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTYK----NLKFQVWDLGGQTS 56 +I+ LG G GK+++ + PTIG + T ++ Q+WD GQ Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 112 R Y +++A + V D + S + V M+R+E A+++++ NK D Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFE-SVGDWVKMVRDERGEKAVIIIVGNKMD 279 >SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1117 Score = 42.3 bits (95), Expect = 2e-04 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 27 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 86 T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + + Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LTLE 284 Query: 87 KDELVHMLRE 96 +DE + + E Sbjct: 285 EDESTNRMEE 294 >SB_13045| Best HMM Match : Ras (HMM E-Value=0) Length = 629 Score = 41.5 bits (93), Expect = 3e-04 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%) Query: 2 RILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNVE----QVTYKNLKFQVWDLGGQTS 56 +I+++G G GK+++L + E + + TIG QV K +K QVWD GQ Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116 R YY + V D + + L+ +RE +++++ NK D+ Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLE-VREHADPTIVVMLVGNKCDLKHL 132 Query: 117 LTVA 120 VA Sbjct: 133 RAVA 136 >SB_44625| Best HMM Match : Ras (HMM E-Value=0) Length = 128 Score = 41.1 bits (92), Expect = 4e-04 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Query: 23 GEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 80 G +TTI + F + + + +K Q+WD GQ R YY T +I V D Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62 Query: 81 DRIGISKDELVHMLREEELANAILVVLANKQD 112 D ++ +H + ++ + I +++ NK D Sbjct: 63 DTF-VNVKRWLHEI-DQNCDDVIRILVGNKDD 92 >SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) Length = 115 Score = 40.3 bits (90), Expect = 8e-04 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVEQV--TYKNLKFQVWDLGGQTS 56 ++LI+G GKT+ L++ + + T+G F V+ V K +K Q+WD GQ Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 88 R YY I + D + + +D Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAVQD 114 >SB_28695| Best HMM Match : Ras (HMM E-Value=0) Length = 1058 Score = 39.5 bits (88), Expect = 0.001 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 6/157 (3%) Query: 2 RILILGLDGAGKTTILYKL---QVGEVVTTIPTIGFNVEQVTYKN--LKFQVWDLGGQTS 56 +++ +G G GK++ L++ Q T + F ++ + + Q+WD GQ Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957 Query: 57 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116 R + Y+ D I+ D K +V + E +VL NK D+A Sbjct: 958 FRSITKQYFRKADGILIFYDVTAESSFTNLKKWMV-SVEEGAEEGVAKMVLGNKTDLAED 1016 Query: 117 LTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAM 153 V G + +TSA G + +AM Sbjct: 1017 EESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAM 1053 >SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 778 Score = 38.3 bits (85), Expect = 0.003 Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 7/90 (7%) Query: 29 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 84 I TIG F + + K +K Q+WD GQ R YY II V D D++ Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFN 118 Query: 85 ISKDELVHMLREE-ELANAILVVLANKQDM 113 K L + R E N +LV NK D+ Sbjct: 119 NVKQWLQEIDRYACENVNKLLV--GNKCDL 146 >SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 410 Score = 37.1 bits (82), Expect = 0.007 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 10 GAGKTTILYKLQVGEVVT-TIPTIGFNVEQVTYK----NLKFQVWDLGGQTSIRPYWRCY 64 G GK++++ + G+ T + TIG K + Q+WD GQ + + Sbjct: 221 GVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPF 280 Query: 65 YGNTD--AIIYVVDSADR-DRIGISKDELVHMLREEELANAILVVLANKQDMAG 115 Y +D ++Y VD A + + K E ++ + N ++L NK D+ G Sbjct: 281 YRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG 334 >SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2229 Score = 37.1 bits (82), Expect = 0.007 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVV-TTIPTIGFNVEQVTYKN------LKFQVWDLGG 53 M+++++G + GKTT++++L + T G ++E+ K F++WD GG Sbjct: 552 MKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGG 611 Query: 54 QTSIRPYWRCYYGNTDAIIYV 74 Q +C+ I V Sbjct: 612 QEDYYATHQCFISTLSLYILV 632 >SB_54971| Best HMM Match : Ras (HMM E-Value=0) Length = 239 Score = 35.5 bits (78), Expect = 0.022 Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 12/162 (7%) Query: 4 LILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKN----LKFQVWDLGGQTSIR 58 L +G G GKTT + + GE I T+G V + + +KF VWD GQ Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95 Query: 59 PYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLT 118 YY I + D R+ H E N +V+ NK D+ Sbjct: 96 GLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLERVCENIPIVLCGNKVDIKD--- 150 Query: 119 VAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160 +A + R + Q + SA ++ WL+ L Sbjct: 151 --RKVKAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKL 190 >SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) Length = 241 Score = 35.5 bits (78), Expect = 0.022 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Query: 42 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAII--YVVDSADRDRIGISKDELVHMLREEEL 99 +++K Q+WD GQ R + YY + + +I Y + D + I E V E Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE-- 150 Query: 100 ANAILVVLANKQDM 113 NAI +++ NK+D+ Sbjct: 151 -NAIKLLVGNKKDL 163 >SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) Length = 222 Score = 35.1 bits (77), Expect = 0.029 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%) Query: 67 NTDAIIYVVD-SADRDRIGISKDELVHMLR--EEELANAILVVLANKQDMAGCLTVAEVH 123 N DA IYVVD SA+ R+ I EL M+ + + +LV+ A L+ V Sbjct: 126 NVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPLLVLSAVATQDTLPLSCVRVT 185 Query: 124 QALGLDALRDRTFQIFKTSAVRGEGLDQAMDWL 156 L ++ L +R +Q+ +GL + M WL Sbjct: 186 DMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWL 217 >SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 244 Score = 34.7 bits (76), Expect = 0.038 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIP-TIGFNVEQVTY---------KNLKFQVWD 50 +RI ++G G GKT++++ + E +++ TIG VE Y K + WD Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWD 66 Query: 51 LGGQTSIRPYWRCYYGNTDAIIYVVDSADR 80 +GG + +Y + +I V D +R Sbjct: 67 IGGSANHENSRSIFYNGINGLILVHDLTNR 96 >SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 353 Score = 33.9 bits (74), Expect = 0.067 Identities = 19/75 (25%), Positives = 36/75 (48%) Query: 30 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 89 PT G + + F++ D+GGQ S R W + N +I+++V ++ D++ + D Sbjct: 179 PTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDS 238 Query: 90 LVHMLREEELANAIL 104 M + L I+ Sbjct: 239 ENRMEESKALFRTII 253 >SB_47462| Best HMM Match : Ras (HMM E-Value=0) Length = 385 Score = 33.1 bits (72), Expect = 0.12 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 4/116 (3%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTI-GFNVEQVTYKNLK--FQVWDLGGQTSI 57 ++++LG G GK+ + + G+ V PTI F +++ N ++ D G Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQF 64 Query: 58 RPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDM 113 Y N + V +R K +LR + N +V++ NK D+ Sbjct: 65 ASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI 120 >SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) Length = 1243 Score = 32.3 bits (70), Expect = 0.20 Identities = 12/38 (31%), Positives = 26/38 (68%) Query: 1 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQ 38 M+++++G+ G GKTT+L L+ + + + T+G V++ Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDE 704 >SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) Length = 159 Score = 32.3 bits (70), Expect = 0.20 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 10/119 (8%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQ-------VTYKNLKFQVWDLGGQ 54 +I + G G GKT+I +L E ++ +++Q + K LK +WD G Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSL-HHIDQCFIPLVCICNKKLKIHLWDTLGM 68 Query: 55 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDM 113 R +Y N+ ++ V D + K+ + A +V++ANK D+ Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLVANKMDL 125 >SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) Length = 460 Score = 31.5 bits (68), Expect = 0.36 Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 1 MRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 56 +R+++LG DG GK+ + L + +GE T+ + ++ Q+ +++ + D G+ Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGEVR 76 Query: 57 IR 58 +R Sbjct: 77 VR 78 >SB_7589| Best HMM Match : Ras (HMM E-Value=0) Length = 640 Score = 31.1 bits (67), Expect = 0.47 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTY----KNLKFQVWDLGGQTS 56 +I++ G GK++ + +L + + T+G + + T K Q+WD GQ Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503 Query: 57 IRPYWRCYYGNTDAIIYVVD 76 R + Y+ D ++ + D Sbjct: 504 FRSIAKSYFRKADGVLLLYD 523 >SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) Length = 145 Score = 31.1 bits (67), Expect = 0.47 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Query: 48 VWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD---RIGISKDELVHMLREEELANAIL 104 +WD GQ + +Y D + V D + + +DE + + N Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60 Query: 105 VVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLS-NAL 160 VVL NK D+ A+ QA + D + F+TSA ++QA ++ NAL Sbjct: 61 VVLGNKIDLENRAVSAKRAQA-WCHSKNDIPY--FETSAKEAINVEQAFQTIAKNAL 114 >SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) Length = 188 Score = 30.7 bits (66), Expect = 0.62 Identities = 15/27 (55%), Positives = 19/27 (70%) Query: 105 VVLANKQDMAGCLTVAEVHQALGLDAL 131 V LANKQD+ G + EV+Q+L L AL Sbjct: 28 VRLANKQDLEGAMNDDEVYQSLDLGAL 54 >SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6116 Score = 29.9 bits (64), Expect = 1.1 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 2 RILILGLDGAGKTTILY---KLQVGEVVTTIPTIGFNVE---QVTYKNLKFQVWDLGGQT 55 +++I+G GKT +L K Q EV +PT+ N +V K ++ +WD GQ Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 5988 Query: 56 SIRPYWRCYYGNTDAII--YVVDSAD 79 Y +TD I+ + +DS D Sbjct: 5989 DYDRLRPLSYPDTDVILMCFSIDSPD 6014 >SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) Length = 455 Score = 29.9 bits (64), Expect = 1.1 Identities = 13/37 (35%), Positives = 21/37 (56%) Query: 3 ILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQV 39 +L+ G G GKTT+ K++ +PT GF E++ Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEI 90 >SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) Length = 284 Score = 29.9 bits (64), Expect = 1.1 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 23/132 (17%) Query: 1 MRILILGLDGAGKTT----ILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 56 +R+++LG DG GK+ +L K +GE +T+ +GF + + LK + L Q+ Sbjct: 17 LRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTM----LKIREPQLISQS- 71 Query: 57 IRPYWRCYYGNTDAIIYVVDSADR-DRIGISKDELVHMLREEELANAILVVLANKQDMAG 115 C TD +Y+ + D R G KD VH LR + L Q ++G Sbjct: 72 ------C----TDGYVYLRTAKDTYGRPGTPKDCKVH-LRTAKDTIGRLDTPKYGQVLSG 120 Query: 116 C--LTVAEVHQA 125 C +EVH+A Sbjct: 121 CGVFDGSEVHEA 132 >SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) Length = 421 Score = 29.5 bits (63), Expect = 1.4 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%) Query: 39 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEE 98 V K KF +WD GQ + YY + A I V D S + L+ Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFH-SLRPWIRELQRYG 62 Query: 99 LANAILVVLANKQDMA 114 + ++ V NK D A Sbjct: 63 PQDIVIAVAGNKCDKA 78 >SB_50523| Best HMM Match : Ras (HMM E-Value=0) Length = 154 Score = 29.1 bits (62), Expect = 1.9 Identities = 12/35 (34%), Positives = 15/35 (42%) Query: 42 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 76 K +K Q+WD GQ YY I+ V D Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37 >SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) Length = 965 Score = 29.1 bits (62), Expect = 1.9 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Query: 1 MRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 56 ++++I+G DG GK+ + L K +GE T+ + +V + + ++ D G+ S Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921 Query: 57 IRPYWRCY-YGNTDAIIYVVDS 77 RC G ++Y + S Sbjct: 922 PAKLERCLEIGEVFVVLYSITS 943 >SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 216 Score = 28.7 bits (61), Expect = 2.5 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTI--PTIGFNVEQVTYK-----NLKFQVWDLGGQ 54 ++L++G GK + + K V + + PTIG + T + ++ Q+W + GQ Sbjct: 20 KVLVVGDILTGKQSFV-KRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 78 Query: 55 TSIRPYWRCYYGNTDAIIYVVD 76 R YY DA + + D Sbjct: 79 ERFSSMTRVYYKGADACVVLFD 100 >SB_8315| Best HMM Match : Ras (HMM E-Value=0) Length = 565 Score = 28.7 bits (61), Expect = 2.5 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 16/92 (17%) Query: 1 MRILILGLDGAGKTTILYKLQVGEV-VTTIPTIG--FNVEQVTY-------------KNL 44 ++ L LG G GKT++LY+ +PTIG F ++V + + + Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166 Query: 45 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 76 Q+WD GQ R ++ + + V D Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFD 198 >SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) Length = 1383 Score = 28.7 bits (61), Expect = 2.5 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 8/63 (12%) Query: 1 MRILILGLDGAGKTTIL------YKLQVGEVVTTIP-TIGFNVEQVTY-KNLKFQVWDLG 52 +++ I+G +GAGKTT++ Y ++ V+ + T G + + ++L+ +V+DLG Sbjct: 568 VKVTIVGGEGAGKTTLVKALGFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFDLG 627 Query: 53 GQT 55 G + Sbjct: 628 GDS 630 >SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 81 Score = 28.7 bits (61), Expect = 2.5 Identities = 10/22 (45%), Positives = 16/22 (72%) Query: 1 MRILILGLDGAGKTTILYKLQV 22 +R++++G DG GKT I Y L + Sbjct: 15 VRVMVMGQDGVGKTDIRYTLAI 36 >SB_36331| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 596 Score = 28.3 bits (60), Expect = 3.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 112 DMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLS 157 D+ LT E+H+A +L RT IFK + V + ++ WLS Sbjct: 235 DITPLLTQLEIHEAED-KSLTTRTRDIFKETVVTHKSAKESRRWLS 279 >SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 268 Score = 28.3 bits (60), Expect = 3.3 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 8/97 (8%) Query: 64 YYGNTDAIIYVVDSADRDR---IGISKDELVHMLREEELANAIL-VVLANKQDMAGCLTV 119 +Y +T + V D R+ + I DE+ + N+++ VV ANK D L Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRL-- 67 Query: 120 AEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWL 156 V ++ G + F F+TSA G+G+ + L Sbjct: 68 --VEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTL 102 >SB_28290| Best HMM Match : DUF156 (HMM E-Value=3.3) Length = 209 Score = 28.3 bits (60), Expect = 3.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 112 DMAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLS 157 D+ LT E+H+A +L RT IFK + V + ++ WLS Sbjct: 77 DITPLLTQLEIHEAED-KSLTTRTRDIFKETVVTHKSAKESRRWLS 121 >SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2532 Score = 27.9 bits (59), Expect = 4.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIPT 31 R+LI G GAGKTT+ KL +PT Sbjct: 374 RVLIEGESGAGKTTLCQKLAFDWAKGELPT 403 Score = 27.9 bits (59), Expect = 4.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Query: 2 RILILGLDGAGKTTILYKLQVGEVVTTIPT 31 R+LI G GAGKTT+ KL +PT Sbjct: 1776 RVLIEGESGAGKTTLCQKLAFDWAKGELPT 1805 >SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) Length = 446 Score = 27.5 bits (58), Expect = 5.8 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 102 AILVVLANKQDMAGCLTVAEVH-QALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNAL 160 ++L V + M + VA V Q G L D+ FQ+ K +GE L+ + +SN + Sbjct: 25 SMLAVFLVRHSMNTGVVVASVKTQDRGKSQLLDKYFQMIKDKISKGEDLNSIKNQVSNEI 84 >SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) Length = 704 Score = 27.1 bits (57), Expect = 7.6 Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 16/169 (9%) Query: 2 RILILGLDGAGKTTILYKLQ-----VGEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQ 54 + LI+G G GK+ ++ KL+ + V +T+ E Y K +K + D GQ Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411 Query: 55 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELA--NAILVVLANKQD 112 Y+ + V D + + + R A N L+++ NK+D Sbjct: 412 ERYFSILPAYFRGVQGVFLVFDITVEITF-LQLHRWIDLARTTSGADSNIQLILVGNKKD 470 Query: 113 MAGCLTVAEVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQ 161 M V +A A+ F +TSA + +D MD LQ Sbjct: 471 MEDNRAVT-YSRAKEFAAMNG--FPYIETSA---KDVDSLMDMFKKMLQ 513 >SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) Length = 134 Score = 27.1 bits (57), Expect = 7.6 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 64 YYGNTDAIIYVVDSADRDRIGIS---KDELVHMLREEELANAILVVLANKQDMAGCLTVA 120 Y N + I + DR ++ KD++ + R +++ +V++ NK D+ G Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIP---IVLVGNKDDLEG---KR 58 Query: 121 EVHQALGLDALRDRTFQIFKTSAVRGEGLDQAMDWLSNALQARK 164 EV G + F+TSA + +D A L ++ ++ Sbjct: 59 EVTTQEGQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKKE 102 >SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) Length = 777 Score = 27.1 bits (57), Expect = 7.6 Identities = 11/35 (31%), Positives = 21/35 (60%) Query: 104 LVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQI 138 ++ ANK D+ L+ + LGL+A++D+ + I Sbjct: 54 VLFFANKMDLRDALSSIKCTNLLGLEAIKDKPWHI 88 >SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 310 Score = 27.1 bits (57), Expect = 7.6 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 3 ILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW 61 +++LG G GK+ +L + G + PT+ + + L + Y Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYD--VSATIDEDPATLHITDTASTYE 187 Query: 62 RCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE--EELANAILVVLA-NKQDMAGCLT 118 Y + I VV S + R + +LV ++RE ++ A L+VLA NK D+ C Sbjct: 188 PVYLSQNEGFI-VVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRA 246 Query: 119 VA 120 V+ Sbjct: 247 VS 248 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.322 0.138 0.405 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 4,737,085 Number of Sequences: 59808 Number of extensions: 165828 Number of successful extensions: 507 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 436 Number of HSP's gapped (non-prelim): 77 length of query: 164 length of database: 16,821,457 effective HSP length: 77 effective length of query: 87 effective length of database: 12,216,241 effective search space: 1062812967 effective search space used: 1062812967 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 57 (27.1 bits)
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