Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001070-TA|BGIBMGA001070-PA|IPR005225|Small GTP-binding
protein domain, IPR006689|ARF/SAR superfamily,
IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1,
IPR003579|Ras small GTPase, Rab type
         (164 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       42   7e-06
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            42   1e-05
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      36   5e-04
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    33   0.006
AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha su...    33   0.006
AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha su...    33   0.006
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    33   0.006
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    31   0.024
AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha su...    31   0.024
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       29   0.097
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   3.6  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   3.6  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   3.6  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    22   8.4  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    22   8.4  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 42.3 bits (95), Expect = 7e-06
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 27  TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 85
           T + T G      ++K++ F+++D+GGQ S R  W  C+ G T AII+ V  +  D +  
Sbjct: 176 TRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSGYDLVLA 234

Query: 86  SKDELVHMLREEELANAI 103
             +E+  M+   +L ++I
Sbjct: 235 EDEEMNRMIESMKLFDSI 252



 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/22 (31%), Positives = 18/22 (81%)

Query: 1  MRILILGLDGAGKTTILYKLQV 22
          +++L+LG   +GK+TI+ ++++
Sbjct: 33 VKLLLLGAGESGKSTIVKQMKI 54


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 41.9 bits (94), Expect = 1e-05
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 6/123 (4%)

Query: 2   RILILGLDGAGKTTILYKLQVGEVVT-TIPTIG--FNVEQVTYKN--LKFQVWDLGGQTS 56
           ++++LG    GK++++ +   G+       TIG  F  + +   +  +KF++WD  GQ  
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 57  IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 116
                  YY    A I V D  + D    +K   V  L+ +   N ++ +  NK D+A  
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAK-TWVKELQRQASPNIVIALAGNKADLANS 144

Query: 117 LTV 119
             V
Sbjct: 145 RVV 147


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 36.3 bits (80), Expect = 5e-04
 Identities = 20/76 (26%), Positives = 37/76 (48%)

Query: 29  IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 88
           +PT G        + ++F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +
Sbjct: 178 VPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESE 237

Query: 89  ELVHMLREEELANAIL 104
               M   + L   I+
Sbjct: 238 NENRMEESKALFKTII 253


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 32.7 bits (71), Expect = 0.006
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 30  PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 89
           PT G         ++ F++ D+GGQ S R  W   + N  +II++V  ++ D+I    + 
Sbjct: 36  PTTGILEYPFDLDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESEN 95

Query: 90  LVHMLREEELANAIL 104
              M   + L   I+
Sbjct: 96  ENRMEESKALFKTII 110


>AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha
           subunit AgGq5 protein.
          Length = 127

 Score = 32.7 bits (71), Expect = 0.006
 Identities = 17/63 (26%), Positives = 33/63 (52%)

Query: 42  KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 101
           + ++F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +    M   + L  
Sbjct: 5   EEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFK 64

Query: 102 AIL 104
            I+
Sbjct: 65  TII 67


>AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq4 protein.
          Length = 163

 Score = 32.7 bits (71), Expect = 0.006
 Identities = 17/63 (26%), Positives = 33/63 (52%)

Query: 42  KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 101
           + ++F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +    M   + L  
Sbjct: 5   EEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFK 64

Query: 102 AIL 104
            I+
Sbjct: 65  TII 67


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 32.7 bits (71), Expect = 0.006
 Identities = 17/63 (26%), Positives = 33/63 (52%)

Query: 42  KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 101
           + ++F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +    M   + L  
Sbjct: 5   EEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFK 64

Query: 102 AIL 104
            I+
Sbjct: 65  TII 67


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 17/59 (28%), Positives = 30/59 (50%)

Query: 46  FQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAIL 104
           F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +    M   + L   I+
Sbjct: 8   FRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTII 66


>AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq1 protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 17/59 (28%), Positives = 30/59 (50%)

Query: 46  FQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAIL 104
           F++ D+GGQ S R  W   + N  +II++V  ++ D+I    +    M   + L   I+
Sbjct: 8   FRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTII 66


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 0.097
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 44  LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 96
           + F ++D+GGQ   R  W   + +  AII+V   +  + + + +D   + LRE
Sbjct: 206 VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV-LREDPTQNRLRE 257



 Score = 23.0 bits (47), Expect = 4.8
 Identities = 8/21 (38%), Positives = 17/21 (80%)

Query: 2  RILILGLDGAGKTTILYKLQV 22
          R+L+LG   +GK+TI+ ++++
Sbjct: 46 RLLLLGAGESGKSTIVKQMRI 66


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 3   ILILGLDGAGKTTILYKL 20
           + ++G  GAGKTT+L  L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 3   ILILGLDGAGKTTILYKL 20
           + ++G  GAGKTT+L  L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 3   ILILGLDGAGKTTILYKL 20
           + ++G  GAGKTT+L  L
Sbjct: 107 LAVMGSSGAGKTTLLNAL 124


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
          subunit AgOn protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/22 (31%), Positives = 18/22 (81%)

Query: 1  MRILILGLDGAGKTTILYKLQV 22
          +++L+LG   +GK+TI+ ++++
Sbjct: 21 IKLLLLGAGESGKSTIVKQMKI 42


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
          subunit AgOa protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/22 (31%), Positives = 18/22 (81%)

Query: 1  MRILILGLDGAGKTTILYKLQV 22
          +++L+LG   +GK+TI+ ++++
Sbjct: 21 IKLLLLGAGESGKSTIVKQMKI 42


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,086
Number of Sequences: 2123
Number of extensions: 5674
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 18
length of query: 164
length of database: 516,269
effective HSP length: 59
effective length of query: 105
effective length of database: 391,012
effective search space: 41056260
effective search space used: 41056260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)