GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001068-TA|BGIBMGA001068-PA|IPR002529|Fumarylacetoacetate
(FAA) hydrolase
         (285 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.7  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    24   5.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   5.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.5  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 250 GGVGVYRNPPEFLQPGDVITSEIENIGTFETR 281
           GG+GV R PP+ +   D++     + G +E R
Sbjct: 96  GGIGVLRLPPDKVWKPDIVLFNNAD-GNYEVR 126


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 172 SQLLLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQK 215
           S  +L    DTF P G  +   D +   +  N+ C  NG   Q+
Sbjct: 67  SHAILVYLCDTFAPPGHTLALPDALTRAKVFNMLCFNNGCLFQR 110


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 28/149 (18%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 91  KLTPPEL-PFIFNKFPSTVV--GPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDS-SH 146
           K +PPE+ P +     + +V   P+D +K+  ++ ++    + L     +K+  +   SH
Sbjct: 611 KFSPPEIEPAVLFATNNALVCETPDDAMKVAYEIDRSRYDALALDGTFYQKSGIISGGSH 670

Query: 147 AFDYVLGYTIAQDIGATDWEKNKKISQLLLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKC 206
                      + +     +K K   +L   + M      G       +I   +N  +K 
Sbjct: 671 DLARKAKRWDEKHMAQLKLQKEKITEELK--EVMKKTRRQGELTTVESQIRGLEN-RLKY 727

Query: 207 SINGVQKQKSNTNQFIHKIPDIIARLSNV 235
           S+N ++  K N N++  ++ D    L  +
Sbjct: 728 SMNDLETSKKNINEYDRQLEDFTRELDQI 756


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 5   QFSYKNSDGIRAGFLDGDNVVDINKEDPKLPSTL 38
           Q S+ N+  ++A  LDG+ + DI     KLP+ L
Sbjct: 517 QASFDNNTKLQAIRLDGNYLTDIAGLFTKLPNLL 550


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.138    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,278
Number of Sequences: 2123
Number of extensions: 12140
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 4
length of query: 285
length of database: 516,269
effective HSP length: 63
effective length of query: 222
effective length of database: 382,520
effective search space: 84919440
effective search space used: 84919440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)