Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001068-TA|BGIBMGA001068-PA|IPR002529|Fumarylacetoacetate
(FAA) hydrolase
(285 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate hyd... 246 9e-65
BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate hyd... 246 9e-65
AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein. 246 9e-65
BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate hyd... 245 1e-64
AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein. 245 1e-64
AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein. 244 2e-64
BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein. 114 3e-25
AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate hyd... 114 3e-25
AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate hyd... 114 3e-25
AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens ... 114 3e-25
AE006639-9|AAK61295.1| 221|Homo sapiens similar to homoprotocat... 114 3e-25
CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein. 112 1e-24
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein. 32 2.6
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein. 32 2.6
AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral integra... 30 8.1
AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral integra... 30 8.1
AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein. 30 8.1
>BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 246 bits (601), Expect = 9e-65
Identities = 122/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW+ + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQMRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q NTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 246 bits (601), Expect = 9e-65
Identities = 122/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW+ + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQMRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q NTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 246 bits (601), Expect = 9e-65
Identities = 122/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW+ + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQMRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q NTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2B protein.
Length = 314
Score = 245 bits (600), Expect = 1e-64
Identities = 123/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPWSEVTFLAPVTWPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWLTRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q SNTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 245 bits (600), Expect = 1e-64
Identities = 123/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPWSEVTFLAPVTWPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWLTRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q SNTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein.
Length = 314
Score = 244 bits (598), Expect = 2e-64
Identities = 122/288 (42%), Positives = 169/288 (58%), Gaps = 7/288 (2%)
Query: 1 MKLLQFSYKNSDGIRAGFLDGDN--VVDINKEDPKLPSTLIELLKTNXXXXXXXXXXXXX 58
M+L+QF + G G G+ V+++N DP LP T+ + L+
Sbjct: 27 MRLVQFRAPHLVGPHLGLETGNGGGVINLNAFDPTLPKTMTQFLEQGEATLSVARRALAA 86
Query: 59 XX----LSGITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDT 114
S +T APV DKV+CVG+NY DHC+EQ + P+ P IF+KF S++VGP D
Sbjct: 87 QLPVLPRSEVTFLAPVTRPDKVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDE 146
Query: 115 IKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL 174
+ L S+ V E+EL VVIGKK + ++ A +V G+T+A D+ A DW+ + Q
Sbjct: 147 VVLPPQ-SQEVDWEVELAVVIGKKGKHIKATDAMAHVGGFTVAHDVSARDWQMRRNGKQW 205
Query: 175 LLGKAMDTFCPIGPWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSN 234
LLGK DTFCP+GP +VT D + +P NL + C +NG Q NTNQ + K D+IA +S
Sbjct: 206 LLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQ 265
Query: 235 VMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRV 282
+T PGD+ILTGTP GVGV+R PP FL+ GD + EIE +G +V
Sbjct: 266 FVTFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELGVIINKV 313
>BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein.
Length = 226
Score = 114 bits (275), Expect = 3e-25
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 137
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ +S ++TL GDIILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
Query: 254 VYRNPPE 260
+ E
Sbjct: 198 PVKENDE 204
>AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 226
Score = 114 bits (275), Expect = 3e-25
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 137
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ +S ++TL GDIILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
Query: 254 VYRNPPE 260
+ E
Sbjct: 198 PVKENDE 204
>AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 248
Score = 114 bits (275), Expect = 3e-25
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 137
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ +S ++TL GDIILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
Query: 254 VYRNPPE 260
+ E
Sbjct: 198 PVKENDE 204
>AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ36880 fis, clone BGGI12000616, weakly similar to
Isomerase-like protein. ).
Length = 224
Score = 114 bits (275), Expect = 3e-25
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 137
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ +S ++TL GDIILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 197
Query: 254 VYRNPPE 260
+ E
Sbjct: 198 PVKENDE 204
>AE006639-9|AAK61295.1| 221|Homo sapiens similar to
homoprotocatechuate catabolism bifunctional
isomerase/decarboxylase protein.
Length = 221
Score = 114 bits (275), Expect = 3e-25
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 17 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 75
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 76 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 134
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ +S ++TL GDIILTGTP GVG
Sbjct: 135 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVG 194
Query: 254 VYRNPPE 260
+ E
Sbjct: 195 PVKENDE 201
>CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein.
Length = 224
Score = 112 bits (270), Expect = 1e-24
Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 76 VLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVI 135
++CVG NY DH E + P +F K PST P + L ++ + E+EL VV+
Sbjct: 20 IVCVGRNYADHVREMRSAVLSEPVLFLK-PSTAYAPEGSPILMPAYTRNLHHELELGVVM 78
Query: 136 GKKASKVDSSHAFDYVLGYTIAQDIGATDW--EKNKKISQLLLGKAMDTFCPIGPWIVTS 193
GK+ V + A DYV GY + D+ A D E KK L K+ CP+ + V
Sbjct: 79 GKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAF-VPK 137
Query: 194 DEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVG 253
++I +P L + +NG +Q+ T+ I IP II+ + ++TL GDIILTGTP GVG
Sbjct: 138 EKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVPKIITLEEGDIILTGTPKGVG 197
Query: 254 VYRNPPE 260
+ E
Sbjct: 198 PVKENDE 204
>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
Length = 1032
Score = 31.9 bits (69), Expect = 2.6
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 88 EEQKLTPPELPFIFN--KFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSS 145
E+ PE P K PSTV PN + + + S V L + GK +D S
Sbjct: 593 EDVSEVAPEKPITTENPKLPSTV-SPN--VFNETEFSLNVTTSAYLESLHGKNVKHIDDS 649
Query: 146 HAFDYVLGYTIAQDIGATDWEKN--KKISQ 173
D + +T +D G D E+N K IS+
Sbjct: 650 SPEDLIAAFTETRDKGIVDSERNAFKAISE 679
>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
Length = 1013
Score = 31.9 bits (69), Expect = 2.6
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 88 EEQKLTPPELPFIFN--KFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSS 145
E+ PE P K PSTV PN + + + S V L + GK +D S
Sbjct: 574 EDVSEVAPEKPITTENPKLPSTV-SPN--VFNETEFSLNVTTSAYLESLHGKNVKHIDDS 630
Query: 146 HAFDYVLGYTIAQDIGATDWEKN--KKISQ 173
D + +T +D G D E+N K IS+
Sbjct: 631 SPEDLIAAFTETRDKGIVDSERNAFKAISE 660
>AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 212 QKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVY 255
Q KS++NQ+I ++ D IA L++ + L G +G P G++
Sbjct: 683 QLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFDGIH 726
>AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 212 QKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVY 255
Q KS++NQ+I ++ D IA L++ + L G +G P G++
Sbjct: 683 QLNKSDSNQYIGELKDQIAELNHELRCLKGQRGFSGQPPFDGIH 726
>AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein.
Length = 810
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 212 QKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVY 255
Q KS++NQ+I ++ D IA L++ + L G +G P G++
Sbjct: 683 QLNKSDSNQYIGELKDQIAELNHELRCLKGQKGFSGQPPFDGIH 726
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,829,167
Number of Sequences: 224733
Number of extensions: 1699689
Number of successful extensions: 5866
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5825
Number of HSP's gapped (non-prelim): 19
length of query: 285
length of database: 73,234,838
effective HSP length: 89
effective length of query: 196
effective length of database: 53,233,601
effective search space: 10433785796
effective search space used: 10433785796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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