Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001068-TA|BGIBMGA001068-PA|IPR002529|Fumarylacetoacetate
(FAA) hydrolase
(285 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family pr... 118 3e-27
At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family pr... 111 4e-25
At3g11010.1 68416.m01329 disease resistance family protein / LRR... 30 1.5
At3g53380.1 68416.m05891 lectin protein kinase family protein co... 30 2.0
At1g69770.1 68414.m08028 chromomethylase 3 (CMT3) nearly identic... 30 2.0
At5g58420.1 68418.m07315 40S ribosomal protein S4 (RPS4D) riboso... 29 3.6
At2g48050.1 68415.m06014 expressed protein ; expression supporte... 29 3.6
At5g27060.1 68418.m03229 disease resistance family protein conta... 29 4.7
At2g17036.1 68415.m01966 F-box family protein ; similar to SKP1... 29 4.7
At1g72110.1 68414.m08335 expressed protein 29 4.7
At5g07090.1 68418.m00804 40S ribosomal protein S4 (RPS4B) 28 6.2
At2g17360.1 68415.m02005 40S ribosomal protein S4 (RPS4A) contai... 28 6.2
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 28 8.2
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 28 8.2
At3g24240.1 68416.m03042 leucine-rich repeat transmembrane prote... 28 8.2
At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containi... 28 8.2
>At4g15940.1 68417.m02420 fumarylacetoacetate hydrolase family
protein contains Pfam domain, PF01557:
fumarylacetoacetate hydrolase family protein
Length = 222
Score = 118 bits (285), Expect = 3e-27
Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 5/181 (2%)
Query: 75 KVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVV 134
K++CVG NY H +E P+ P IF K S+ + TI++ + ++ E+EL +V
Sbjct: 15 KIVCVGRNYAAHAKELGNAVPKEPVIFLKPTSSYLENGGTIEIPHPLD-SLHHEVELALV 73
Query: 135 IGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL--LLGKAMDTFCPIGPWIVT 192
IG+KA V S A DY+ GY +A D+ A + + + K S L + K DTF PI ++
Sbjct: 74 IGQKARDVPESIAMDYIGGYAVALDMTARELQASAKASGLPWTVAKGQDTFTPISS-VLP 132
Query: 193 SDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGV 252
+ +P NL + ++G +QK T I K+P +I+ +S++MTL GD+ILTGTP GV
Sbjct: 133 KAMVRDPDNLELWLKVDGETRQKGLTKDMIFKVPYLISYISSIMTLY-GDVILTGTPEGV 191
Query: 253 G 253
G
Sbjct: 192 G 192
>At3g16700.1 68416.m02133 fumarylacetoacetate hydrolase family
protein contains Pfam domain, PF01557:
fumarylacetoacetate hydrolase family protein
Length = 224
Score = 111 bits (268), Expect = 4e-25
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 75 KVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVV 134
K++ VGLNY H +E P+ P +F K S+ + TI++ + ++ E+EL VV
Sbjct: 15 KIVGVGLNYASHAKELGNALPKDPIVFLKPTSSYLENGGTIEIPHPLD-SLHHEVELAVV 73
Query: 135 IGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL--LLGKAMDTFCPIGPWIVT 192
IG+KA V A +Y+ GY +A D+ A + + + S L L K DTF PI ++
Sbjct: 74 IGQKARDVPERLAMNYIGGYALALDMTARELQVSAMASGLPCTLAKGQDTFTPISS-VLP 132
Query: 193 SDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGV 252
+ +P NL + ++ +QK T I K+P +I+ +S+VMTL GD+ILTGTP G+
Sbjct: 133 KAMVLDPNNLELWLKVDDETRQKGWTKDMIFKVPYLISYISSVMTLFKGDVILTGTPEGI 192
Query: 253 G 253
G
Sbjct: 193 G 193
>At3g11010.1 68416.m01329 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 894
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 203 NVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGT 248
NV ++ G+ + N+F +P I LSN+M D TGT
Sbjct: 244 NVLLNLTGLSVVSLSNNKFTGTLPPNITSLSNLMAFYASDNAFTGT 289
>At3g53380.1 68416.m05891 lectin protein kinase family protein
contains Pfam domains, PF00069: Protein kinase domain,
PF00138: Legume lectins alpha domain, and PF00139:
Legume lectins beta domain
Length = 715
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 230 ARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTF 278
ARLSN + L D+ + + G +Y NP F QPG + + +F
Sbjct: 40 ARLSNGIVGLTRDLSVPNSGAGKVLYSNPIRFRQPGTHFPTSFSSFFSF 88
>At1g69770.1 68414.m08028 chromomethylase 3 (CMT3) nearly identical
to chromomethylase CMT3 [Arabidopsis thaliana]
GI:14583092, GI:14647157
Length = 839
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 79 VGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKL-------KMDVSKAVVCEIEL 131
+ LN D+ E P F FP +VGP + +KL K++ K +V + L
Sbjct: 661 LNLNINDY-ERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYAL 719
Query: 132 TVVIGK 137
T V GK
Sbjct: 720 TYVDGK 725
>At5g58420.1 68418.m07315 40S ribosomal protein S4 (RPS4D) ribosomal
protein S4, Arabidopsis thaliana, PIR:T48480
Length = 262
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 103 KFPSTVVGPNDTIKLKMDVSKAV 125
++P ++ PNDTIKL ++ +K V
Sbjct: 148 RYPDPLIKPNDTIKLDLEANKIV 170
>At2g48050.1 68415.m06014 expressed protein ; expression supported
by MPSS
Length = 1500
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 122 SKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQ 173
+++ + EI + +++ + S + SS FDYV Y A+ IGA E+ KK ++
Sbjct: 700 ARSALVEIIIFMLVSLQ-SYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAAR 750
>At5g27060.1 68418.m03229 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 957
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 203 NVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGT 248
NV ++ G+ + N+F +P I LSN+M D TGT
Sbjct: 307 NVLLNLTGLSLLSLSNNKFTGTLPPNITSLSNLMDFDASDNAFTGT 352
>At2g17036.1 68415.m01966 F-box family protein ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 428
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 158 QDIGATDWEKNKKISQLLLGKAMDTFCPIGPWIVTSDEIGNPQNLN 203
+++G D+ K L + F P PWI TS E+ Q+LN
Sbjct: 351 RNLGVFDFRSGKTELVNKLPEYAKLFWPPPPWITTSHEVSGFQSLN 396
>At1g72110.1 68414.m08335 expressed protein
Length = 479
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 217 NTNQFIHKIP--DIIARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIEN 274
+ N+FIH+I D + + N M + D++ G+ Y N L+ + N
Sbjct: 231 SANKFIHRIISLDDVKMVKNAMNMTVNDVLFGMVQAGLSRYLNQRYDLETSSKSRKNLHN 290
Query: 275 IG 276
IG
Sbjct: 291 IG 292
>At5g07090.1 68418.m00804 40S ribosomal protein S4 (RPS4B)
Length = 262
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 103 KFPSTVVGPNDTIKLKMDVSKAV 125
++P ++ PNDTIKL ++ +K V
Sbjct: 148 RYPDPLIKPNDTIKLDLEENKIV 170
>At2g17360.1 68415.m02005 40S ribosomal protein S4 (RPS4A) contains
ribosomal protein S4 signature from residues 8 to 22
Length = 261
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 103 KFPSTVVGPNDTIKLKMDVSKAV 125
++P ++ PNDTIKL ++ +K V
Sbjct: 148 RYPDPLIKPNDTIKLDLEENKIV 170
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 219 NQFIHKIPDIIARLSNVMTLLPGDIILTGT 248
N F +IPD I SN+ TL D LTGT
Sbjct: 441 NHFTGEIPDDIFNCSNLETLSVADNNLTGT 470
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 169 KKISQLLLGKAMDTFCPIGPWIVTSDEIGNPQNL--NVKCSINGVQKQ-----KSNTNQF 221
+K+ +LL+ A+ +GP++ + G P+ L ++K + + K++ F
Sbjct: 23 EKLDELLISSAICNGEDLGPFVRKTFGTGKPETLLHHLKFFARSKESEIEEVCKAHYQDF 82
Query: 222 IHKIPDIIARLSNVMTL 238
IH + D+ + LS+V +L
Sbjct: 83 IHAVDDLKSLLSDVESL 99
>At3g24240.1 68416.m03042 leucine-rich repeat transmembrane protein
kinase, putative similar to CLV1 receptor kinase
GB:AAB58929 from [Arabidopsis thaliana]
Length = 1141
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 217 NTNQFIHKIPDIIARLSNVMTLLPGDIILTGT 248
N+NQ KIP I++ S + +L+ D +LTG+
Sbjct: 161 NSNQLTGKIPPDISKCSKLKSLILFDNLLTGS 192
>At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 895
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 128 EIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQLLLG 177
E+EL V KKA +++ S A Y+ I ++G +W++ ++ +L+ G
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVG--EWDEVEETRKLMKG 883
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,822,117
Number of Sequences: 28952
Number of extensions: 280236
Number of successful extensions: 698
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 673
Number of HSP's gapped (non-prelim): 24
length of query: 285
length of database: 12,070,560
effective HSP length: 80
effective length of query: 205
effective length of database: 9,754,400
effective search space: 1999652000
effective search space used: 1999652000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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