Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001067-TA|BGIBMGA001067-PA|undefined
(272 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_47364| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 2.3
SB_20927| Best HMM Match : Acyl_transf_1 (HMM E-Value=3.8e-07) 30 2.3
SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40) 29 3.1
SB_50262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27) 28 7.1
SB_25600| Best HMM Match : RVT_1 (HMM E-Value=0.0074) 28 7.1
SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18) 28 7.1
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 7.1
SB_4509| Best HMM Match : Brix (HMM E-Value=4.4) 28 9.4
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 27 KNVQMFKSLC-SIDELMKIVRLEHRDLKLFIAIILLLSSTVIMNVYFLIY 75
K + +F C + D + + L H DLK+ + L+LSSTV++++Y IY
Sbjct: 515 KVLVLFAHACQNNDRVKRPYLLTHSDLKMAAKMYLMLSSTVLLSIYRKIY 564
>SB_47364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 156 KAYKIVEKTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVR 215
KA KI+ F L WG F+ N++ I+ M V +Y+ + LQ + N +
Sbjct: 221 KAAKIIAVVIGEFLLCWGPFLVTNVVLNYCISCRMAFPVQGAYILKLLQYSSSCFNPYLY 280
Query: 216 NCENDIVRCHLKNI 229
C N +R +K++
Sbjct: 281 TCLNAELRSSIKHM 294
>SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 90 ANIGIMNEDLEAITFVSVLYMLYDRVKYINQTALDP---VNIAKLIKE-----SDGQNDE 141
A G +NE++E + V + LY+ + QT +DP VN +K S ++D+
Sbjct: 63 AQTGRLNEEMEKLLVVDEVLQLYNLKEIKLQTKIDPEDFVNCWNQMKSDPDTPSADEHDQ 122
Query: 142 ETVSRILKAFKEISKAYKIVEKTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLER 201
E +++ +E A + ++ +V + + +N KF+ ++ + S E
Sbjct: 123 EVEQELMRRIREAEDAAQREKEKRKVIEAALAQMIQENT--SKFVDKLKEKELTESEREE 180
Query: 202 ELQ 204
LQ
Sbjct: 181 LLQ 183
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 108 LYMLYDRVKYINQTALDPVNIAKLIKESDGQNDEETVSRILKAFKEISKAYKIVEKTF 165
L+ +++ +N+ + + A L+ G D+ET+SR LK KE+ + +EK F
Sbjct: 4413 LHRIHELEITVNRLEEEATDRASLLDSIQG--DKETISRALKQNKELKTQLEEIEKRF 4468
>SB_20927| Best HMM Match : Acyl_transf_1 (HMM E-Value=3.8e-07)
Length = 426
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 54 LFIAIILLLSSTVIMNVYFLIYMVIILPISEK-WVPF-ANI---GIMNEDLEAITFVSVL 108
+ I IIL++ T+++ + +I ++II+ IS K W F N+ GI ++ + ++F +
Sbjct: 14 IIIVIILIIIITIVIIIITIIIVIIIIIISSKSWFVFILNVFEEGIFDQ-IFIVSFDMNV 72
Query: 109 YMLYDRVKYINQTALDPVNIAKLIKESDGQNDEETVSRILKAFKEISKAYKIVEKTFRVF 168
+ +DR I + A ++ ++ + V R+ F++ SK ++ T +F
Sbjct: 73 FSHFDRYIAITKHARTQSTLSYCARKIHAKKLRIVVKRL---FQQTSKQFRHDHSTAFLF 129
>SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40)
Length = 414
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/82 (21%), Positives = 37/82 (45%)
Query: 163 KTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVRNCENDIV 222
KT + + +GT+ +N+ K++ + + EL+K +R +
Sbjct: 244 KTINNYRIFYGTYKIENVKSYKYLGLHFCPYGNFNLAKEELKKVALKAMFKLRKEMGEHF 303
Query: 223 RCHLKNIYRIIDTEIEPMTVFG 244
R +K R+ DT I+P+ ++G
Sbjct: 304 RQDIKLTLRLFDTLIQPILLYG 325
>SB_50262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 830
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 50 RDLKL-FIAIILLLSSTVIMNVYFLIYMVIILPISEKWVPFANIGIMNEDLEA-ITFVSV 107
RD L FI II+++ I + FL++++I+L IS + ++ + + D++
Sbjct: 613 RDKSLVFIVIIIIVFFVFINIIVFLVFIIIVLTISRRLDDYSWEAVRHIDMKCKCDLTET 672
Query: 108 LYMLYDRVK 116
+ LY+ K
Sbjct: 673 IVELYENGK 681
>SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27)
Length = 611
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/82 (21%), Positives = 37/82 (45%)
Query: 163 KTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVRNCENDIV 222
KT + + +GT+ +N+ K++ + + EL+K +R +
Sbjct: 52 KTMNNYRIFYGTYKIENVKSYKYLGLHFCPYGNFNMAKGELKKVALKAMFNLRKEMGEHF 111
Query: 223 RCHLKNIYRIIDTEIEPMTVFG 244
R +K R+ DT I+P+ ++G
Sbjct: 112 RQDIKLTLRLFDTLIQPILLYG 133
>SB_25600| Best HMM Match : RVT_1 (HMM E-Value=0.0074)
Length = 337
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/82 (21%), Positives = 37/82 (45%)
Query: 163 KTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVRNCENDIV 222
KT + + +GT+ +N+ K++ + + EL+K +R +
Sbjct: 170 KTMNNYRIFYGTYKIENVKSYKYLGLNFGPYGNFNLAKEELKKVALKAMFKLRKEMGEHF 229
Query: 223 RCHLKNIYRIIDTEIEPMTVFG 244
R +K R+ DT I+P+ ++G
Sbjct: 230 RQDIKLTLRLFDTLIQPILLYG 251
>SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18)
Length = 418
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 163 KTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVRNCENDIV 222
KT + + +GT+ +N+ K++ + + EL+K ++ +
Sbjct: 270 KTMNNYRIFYGTYKIENVKSYKYLGLYFCPYGNSNLAKEELKKVALNAMFKLKKEMGEHF 329
Query: 223 RCHLKNIYRIIDTEIEPMTVFG 244
R +K R+ DT I+P+ ++G
Sbjct: 330 RQDIKLTLRLFDTLIQPILLYG 351
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 114 RVKYINQTALDPVNIAKLIKESDGQNDEETVSRILKAFKEISKAYKIVEKTFRVF 168
RVKYIN + L P + K +ES + TV I++ SK ++TFRVF
Sbjct: 815 RVKYINTSGLSPAYVTK--RESCINDKNVTVFIIIQYDTSNSK----TDETFRVF 863
>SB_4509| Best HMM Match : Brix (HMM E-Value=4.4)
Length = 288
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 163 KTFRVFNLSWGTFMSKNLIGVKFIARIMLISVCVSYLERELQKTKGLCNLAVRNCENDIV 222
KT + + +GT+ +N+ K++ + + +L+K +R +
Sbjct: 85 KTMNNYRIFYGTYKIENVKSYKYLGLHFCPYGNFNLAKEKLKKVALKAMFKLRKEMGEHF 144
Query: 223 RCHLKNIYRIIDTEIEPMTVFG 244
R +K R+ DT I+P+ ++G
Sbjct: 145 RQDIKLTLRLFDTLIQPILLYG 166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.329 0.142 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,651,273
Number of Sequences: 59808
Number of extensions: 282015
Number of successful extensions: 1087
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 12
length of query: 272
length of database: 16,821,457
effective HSP length: 81
effective length of query: 191
effective length of database: 11,977,009
effective search space: 2287608719
effective search space used: 2287608719
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 59 (27.9 bits)
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