GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001067-TA|BGIBMGA001067-PA|undefined
         (272 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    29   5.2  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    29   5.2  
X68130-1|CAA48237.1|  943|Drosophila melanogaster protein ( D.me...    29   6.8  
AY118278-1|AAM48307.1|  305|Drosophila melanogaster AT11641p pro...    29   9.0  
AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-P...    29   9.0  
AE014134-244|AAF51381.1|  305|Drosophila melanogaster CG5561-PA ...    29   9.0  

>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query: 127  NIAKLIKESDGQNDEETVSRILK 149
            NI+K++ +SD QND   VS ILK
Sbjct: 4166 NISKILSKSDEQNDAMAVSTILK 4188


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query: 127  NIAKLIKESDGQNDEETVSRILK 149
            NI+K++ +SD QND   VS ILK
Sbjct: 4166 NISKILSKSDEQNDAMAVSTILK 4188


>X68130-1|CAA48237.1|  943|Drosophila melanogaster protein (
           D.melanogaster DNA sequenceof Het-A transposable element
           9D4. ).
          Length = 943

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 6/134 (4%)

Query: 15  FIVFSNTFLHYEKNVQMFKSLCSIDELMKIVRL-EHRDLKLFIAIILLLSSTVIMNVYFL 73
           FI++   F   + N+ M  +L S DE++ I    E R    ++ I  + + +    +  +
Sbjct: 12  FILYKYRFNIIKTNMSMSDNLFSDDEVLSISSSPEQRSSPFYLNISPMSNGSDNSQINTI 71

Query: 74  IYMVIILPISEKWVPFANIGIMNEDLEAITFVSVLYMLYDRVKYINQTALDPVNIAKLIK 133
           I+    LP ++     ANI + N    AI  VS L          N    DP+++     
Sbjct: 72  IFNQKKLPSNQ-----ANISLKNSSGAAIKIVSSLSHKKKENSNTNNAQKDPLSLTNTTA 126

Query: 134 ESDGQNDEETVSRI 147
            + G     T  ++
Sbjct: 127 STCGAKSSITEGKL 140


>AY118278-1|AAM48307.1|  305|Drosophila melanogaster AT11641p
           protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 193 SVCVSYLERELQKTKGLCNLAVRNCENDIVRCHLKNIYRIIDTEIEPMTV 242
           S C+SY   +L+          R    ++VRC+ K I  I+  +  PMT+
Sbjct: 24  SPCISYCIFDLESAVFDTRHVYRKALKELVRCYDKRIPDILHVQSGPMTI 73


>AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-PA
           protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 227 KNIYRIIDTEIEPMTVFGLFYINNVPL-DLISLTATYTVVLLQF 269
           K + + I  E++  T +G F I+N  L  + S   TY V+L+QF
Sbjct: 403 KFLTKSIKQEVQ-FTAYGFFAIDNSTLFKIFSAVTTYLVILIQF 445


>AE014134-244|AAF51381.1|  305|Drosophila melanogaster CG5561-PA
           protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 193 SVCVSYLERELQKTKGLCNLAVRNCENDIVRCHLKNIYRIIDTEIEPMTV 242
           S C+SY   +L+          R    ++VRC+ K I  I+  +  PMT+
Sbjct: 24  SPCISYCIFDLESAVFDTRHVYRKALKELVRCYDKRIPDILHVQSGPMTI 73


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.329    0.142    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,127,800
Number of Sequences: 52641
Number of extensions: 417399
Number of successful extensions: 1529
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1525
Number of HSP's gapped (non-prelim): 6
length of query: 272
length of database: 24,830,863
effective HSP length: 84
effective length of query: 188
effective length of database: 20,409,019
effective search space: 3836895572
effective search space used: 3836895572
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 61 (28.7 bits)