GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001066-TA|BGIBMGA001066-PA|IPR000215|Proteinase
inhibitor I4, serpin
         (157 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   4.4  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   7.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 42  KIKTTIDWIKPLRQLGVNQIFNETTSNFESI 72
           KI    D ++PL     + I N T + FE +
Sbjct: 242 KITHFFDLVRPLIAFKFHSILNRTNNIFELV 272


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query: 35  RIGLPRMKIKTTIDW 49
           R  LP+++  T +DW
Sbjct: 295 RTDLPKVRYATALDW 309


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,353
Number of Sequences: 429
Number of extensions: 1543
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 157
length of database: 140,377
effective HSP length: 53
effective length of query: 104
effective length of database: 117,640
effective search space: 12234560
effective search space used: 12234560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)