Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001065-TA|BGIBMGA001065-PA|undefined
(141 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1; ... 42 0.006
UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza s... 33 2.9
UniRef50_Q7PRP6 Cluster: ENSANGP00000001501; n=1; Anopheles gamb... 33 2.9
UniRef50_Q4PI10 Cluster: Predicted protein; n=1; Ustilago maydis... 33 2.9
UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;... 32 5.1
UniRef50_Q9N4A7 Cluster: Nuclear pore complex protein protein 20... 32 5.1
UniRef50_O83868 Cluster: ATP-dependent nuclease, subunit A, puta... 31 6.8
UniRef50_Q193J8 Cluster: Phosphatidylserine/phosphatidylglycerop... 31 6.8
UniRef50_O13801 Cluster: RNA-binding protein; n=1; Schizosacchar... 31 6.8
UniRef50_Q0JH29 Cluster: Os01g0887400 protein; n=5; Oryza sativa... 31 8.9
>UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02611.1 - Gibberella zeae PH-1
Length = 903
Score = 41.5 bits (93), Expect = 0.006
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 41 SWSYGTHLHCLITPLQFIAAHD-RIINVWGHISPAWQLCITWTTHDTHATFKLSLDSPQT 99
S+ Y T+ H + P +++ D R IN H P L I+WT+ T +T LS + T
Sbjct: 73 SYMYRTNQHLTVQPPTSVSSCDARTINYITHTLPQSCLTISWTSSTTTSTPSLSNSTSDT 132
Query: 100 SSSTGDNHAAFSSV 113
SS ++A SSV
Sbjct: 133 SSDPAQSNAPSSSV 146
>UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1;
Silicibacter sp. TM1040|Rep: Putative uncharacterized
protein - Silicibacter sp. (strain TM1040)
Length = 257
Score = 33.9 bits (74), Expect = 1.3
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 9 RILADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTHLHCLITPLQFIAAHDRIINVW 68
R+ AD + L V PQ ++ + +H YG + C++ + H + W
Sbjct: 100 RLQADINEMLGVAPQSIKLSEIVNQMRQSHEEDGGYGEVVTCIVEEI-----HVDDSDFW 154
Query: 69 GHISPAWQLCITWTTHDTHA 88
G P W++ + TTH +H+
Sbjct: 155 G---PRWKVYLDDTTHYSHS 171
>UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0017B10.11 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1814
Score = 32.7 bits (71), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 11 LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 42
LAD T P+ S+ AS+GPSQP H A W
Sbjct: 1269 LADFVAEWTPAPEPVSVPEASSGPSQPPHTAHW 1301
>UniRef50_Q7PRP6 Cluster: ENSANGP00000001501; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000001501 - Anopheles gambiae
str. PEST
Length = 1663
Score = 32.7 bits (71), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 79 ITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVS 114
+T D++AT L+L +PQ S+S G NH SS +
Sbjct: 438 VTNRADDSNATTGLALQAPQASASHGSNHGGASSTA 473
>UniRef50_Q4PI10 Cluster: Predicted protein; n=1; Ustilago
maydis|Rep: Predicted protein - Ustilago maydis (Smut
fungus)
Length = 382
Score = 32.7 bits (71), Expect = 2.9
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 26 SIAASTGPSQPTHRASWSYGTHLHCLITPLQFIAAHDRIINVWGHISPAWQLCITWTTHD 85
S A S+G T R W++G+H H P++F+ I N GH W+ I +
Sbjct: 225 STALSSGSCAGTRRQPWAHGSHSHG--GPMRFM-----IDNYAGHDEVCWRFTIPYDA-- 275
Query: 86 THATFKLSLD 95
T KL++D
Sbjct: 276 TRLAMKLTMD 285
>UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 297
Score = 31.9 bits (69), Expect = 5.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 21 VPQQASIAASTGPSQPTHRA--SWSYGTHLHCLITPLQFIAAHDRIINVWGHISPAWQLC 78
+PQQA + + GPS P A ++ T L CL P+ + + G +P C
Sbjct: 146 LPQQAHLPVANGPSTPDSPACSQQTFHTRLTCL-QPMD-LPHQTHLPAANGPSTPDLPAC 203
Query: 79 ITWTTHDTHATFKLSLDSPQ 98
WT H T T +D PQ
Sbjct: 204 SQWTFH-TSLTCLHPMDLPQ 222
>UniRef50_Q9N4A7 Cluster: Nuclear pore complex protein protein 20,
isoform a; n=3; Caenorhabditis|Rep: Nuclear pore complex
protein protein 20, isoform a - Caenorhabditis elegans
Length = 313
Score = 31.9 bits (69), Expect = 5.1
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 23 QQASIAASTGPSQPTHRASWSYGTHLHCLITPLQFIAAHDRIINVWGHISPAWQLCITWT 82
Q +A G S P + SW++ + L + A++D+ + +W WQ W
Sbjct: 47 QSYPMAELVGHSGPVWKVSWAHPKYGGLLAS-----ASYDKKVIIWNEQQGRWQKAYEWA 101
Query: 83 THDTHAT 89
H+ T
Sbjct: 102 AHEASTT 108
>UniRef50_O83868 Cluster: ATP-dependent nuclease, subunit A, putative;
n=1; Treponema pallidum|Rep: ATP-dependent nuclease,
subunit A, putative - Treponema pallidum
Length = 1239
Score = 31.5 bits (68), Expect = 6.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 5 YHNPRILADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTHLHCLI 52
++ PR++ ++ ++ P Q S +AS P P +GTH+H L+
Sbjct: 1040 HYYPRLVQPVTSLVSPAPGQNSASASPSPLTPQSPRGVEFGTHVHELL 1087
>UniRef50_Q193J8 Cluster:
Phosphatidylserine/phosphatidylglycerophosphate/
cardiolipin synthases and related enzymes-like
precursor; n=2; Desulfitobacterium hafniense|Rep:
Phosphatidylserine/phosphatidylglycerophosphate/
cardiolipin synthases and related enzymes-like precursor
- Desulfitobacterium hafniense (strain DCB-2)
Length = 349
Score = 31.5 bits (68), Expect = 6.8
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 66 NVWGHISP--AWQLCITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVSTHCKL 119
N+ H+S AW+L T D T LSLD P+T+ T DN + ++ + KL
Sbjct: 155 NLAVHLSERSAWKLASTVFNRDWIFTTTLSLDIPKTTELTEDNISVLANTNIKQKL 210
>UniRef50_O13801 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 31.5 bits (68), Expect = 6.8
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 48 LHCLITPLQFIAAHDRIINVWGHISPAWQLCI-TW-TTHDTHATFKLSLDSPQTSSSTGD 105
++C F A +I++V G + QL + +W T H H +L +P+ STG
Sbjct: 229 INCQADARSFYAERSKIVHVAGLTNDVTQLELESWFTNHGVHPVALWTLKTPEPYKSTGT 288
Query: 106 NHAAFSS 112
F+S
Sbjct: 289 GFVLFAS 295
>UniRef50_Q0JH29 Cluster: Os01g0887400 protein; n=5; Oryza
sativa|Rep: Os01g0887400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 682
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 60 AHDRIINVWGHISPAWQLCITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVSTHC 117
+H+R+ I A ++ T H H +S D S++ H A SS+ST C
Sbjct: 497 SHERLTISQEKIKEAHDTLLSITQHGAHIDVGISCDLLDDSTTCHITHVASSSISTSC 554
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.126 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,003,480
Number of Sequences: 1657284
Number of extensions: 5607636
Number of successful extensions: 12846
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12837
Number of HSP's gapped (non-prelim): 14
length of query: 141
length of database: 575,637,011
effective HSP length: 93
effective length of query: 48
effective length of database: 421,509,599
effective search space: 20232460752
effective search space used: 20232460752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
- SilkBase 1999-2023 -