GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001065-TA|BGIBMGA001065-PA|undefined
         (141 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   1.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   3.8  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    22   6.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   6.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 28  AASTGPSQPTHR 39
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein
          protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 2  NFGYHNPRILADKSTSLTVVPQQASIAASTGP 33
          NF Y    +L+D+ T L    +QA +   TGP
Sbjct: 40 NFFYAIQFVLSDEFTHLRPEQRQALLHEGTGP 71


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 82  TTHDTHATFKLSLDSPQTSSSTGDNHAAFSS 112
           T+ D+ ++   S  S  +SSS  D H  +SS
Sbjct: 449 TSSDSSSSDDSSSSSSSSSSSESDEHDFYSS 479


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 82  TTHDTHATFKLSLDSPQTSSSTGDNHAAFSS 112
           T+ D+ ++   S  S  +SSS  D H  +SS
Sbjct: 449 TSSDSSSSDDSSSSSSSSSSSESDEHDFYSS 479


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.126    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,075
Number of Sequences: 2123
Number of extensions: 5095
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 141
length of database: 516,269
effective HSP length: 58
effective length of query: 83
effective length of database: 393,135
effective search space: 32630205
effective search space used: 32630205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)