BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001063-TA|BGIBMGA001063-PA|IPR003511|DNA-binding HORMA, IPR011011|Zinc finger, FYVE/PHD-type (494 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY095052-1|AAM11380.1| 365|Drosophila melanogaster LD40833p pro... 33 0.90 AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin as... 33 0.90 AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-P... 33 0.90 BT024446-1|ABC86508.1| 1482|Drosophila melanogaster HL01030p pro... 33 1.2 AE013599-3723|AAF47094.2| 1482|Drosophila melanogaster CG5591-PA... 33 1.2 AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA... 32 1.6 BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p pro... 31 2.7 AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-P... 31 2.7 AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-P... 31 2.7 AF096284-1|AAD17844.1| 535|Drosophila melanogaster prolyl 4-hyd... 30 6.3 >AY095052-1|AAM11380.1| 365|Drosophila melanogaster LD40833p protein. Length = 365 Score = 33.1 bits (72), Expect = 0.90 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460 V +P EK + +N+ST G+ + +DS KQ ++ +E P + N D Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291 Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484 I K+ T+K +P VKT Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315 >AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin assembly factor-1 p180subunit protein. Length = 1183 Score = 33.1 bits (72), Expect = 0.90 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460 V +P EK + +N+ST G+ + +DS KQ ++ +E P + N D Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291 Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484 I K+ T+K +P VKT Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315 >AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-PB protein. Length = 1183 Score = 33.1 bits (72), Expect = 0.90 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460 V +P EK + +N+ST G+ + +DS KQ ++ +E P + N D Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291 Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484 I K+ T+K +P VKT Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315 >BT024446-1|ABC86508.1| 1482|Drosophila melanogaster HL01030p protein. Length = 1482 Score = 32.7 bits (71), Expect = 1.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 234 CNKQDADDAGLLTCGYCKKSQHAACFGVREEAAPR 268 C +QD++D + C C+K+ HA+C A P+ Sbjct: 256 CRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPK 290 >AE013599-3723|AAF47094.2| 1482|Drosophila melanogaster CG5591-PA protein. Length = 1482 Score = 32.7 bits (71), Expect = 1.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 234 CNKQDADDAGLLTCGYCKKSQHAACFGVREEAAPR 268 C +QD++D + C C+K+ HA+C A P+ Sbjct: 256 CRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPK 290 >AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA protein. Length = 3146 Score = 32.3 bits (70), Expect = 1.6 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 218 EQHSTGTDAEAQ----VRCPCNKQDADDAGLLTCGYCKKSQHAACFGVREEAAP 267 E+ T +AEA+ RC C DD ++ C C QH C G+ + P Sbjct: 839 EETETAPEAEAEDDSVTRCICELTH-DDGYMICCDKCSAWQHVDCMGIDRQNIP 891 >BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p protein. Length = 880 Score = 31.5 bits (68), Expect = 2.7 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%) Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380 GE+ + + P N +K++ + E P T Q + S TN SN Sbjct: 293 GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 351 Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440 + T Q Q + +G S K+ ++ T G + STT S+ +++ Sbjct: 352 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 405 Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482 D++ ++ LS P ++ +++ + K+ D K PGV Sbjct: 406 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 445 >AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-PD, isoform D protein. Length = 635 Score = 31.5 bits (68), Expect = 2.7 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%) Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380 GE+ + + P N +K++ + E P T Q + S TN SN Sbjct: 48 GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 106 Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440 + T Q Q + +G S K+ ++ T G + STT S+ +++ Sbjct: 107 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 160 Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482 D++ ++ LS P ++ +++ + K+ D K PGV Sbjct: 161 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 200 >AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-PC, isoform C protein. Length = 882 Score = 31.5 bits (68), Expect = 2.7 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%) Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380 GE+ + + P N +K++ + E P T Q + S TN SN Sbjct: 295 GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 353 Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440 + T Q Q + +G S K+ ++ T G + STT S+ +++ Sbjct: 354 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 407 Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482 D++ ++ LS P ++ +++ + K+ D K PGV Sbjct: 408 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 447 >AF096284-1|AAD17844.1| 535|Drosophila melanogaster prolyl 4-hydroxylase alpha subunit protein. Length = 535 Score = 30.3 bits (65), Expect = 6.3 Identities = 21/90 (23%), Positives = 38/90 (42%) Query: 314 RASQLRAGELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFF 373 R L A + D + +P+NA +L+K LHS + + R D + N+ Sbjct: 64 RVEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMANLKENLS 123 Query: 374 KTNESNIVERLLAETLSQGSQSDPVGDVLS 403 ++ + V +A T Q + V ++ S Sbjct: 124 FPSQDDFVGSAIALTRLQQTYQLDVAELAS 153 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.316 0.131 0.376 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,040,048 Number of Sequences: 52641 Number of extensions: 879125 Number of successful extensions: 2703 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 2687 Number of HSP's gapped (non-prelim): 23 length of query: 494 length of database: 24,830,863 effective HSP length: 88 effective length of query: 406 effective length of database: 20,198,455 effective search space: 8200572730 effective search space used: 8200572730 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 64 (29.9 bits)
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