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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001063-TA|BGIBMGA001063-PA|IPR003511|DNA-binding HORMA,
IPR011011|Zinc finger, FYVE/PHD-type
         (494 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095052-1|AAM11380.1|  365|Drosophila melanogaster LD40833p pro...    33   0.90 
AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin as...    33   0.90 
AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-P...    33   0.90 
BT024446-1|ABC86508.1| 1482|Drosophila melanogaster HL01030p pro...    33   1.2  
AE013599-3723|AAF47094.2| 1482|Drosophila melanogaster CG5591-PA...    33   1.2  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    32   1.6  
BT009935-1|AAQ22404.1|  880|Drosophila melanogaster SD08724p pro...    31   2.7  
AE014297-4666|AAN14260.2|  635|Drosophila melanogaster CG31012-P...    31   2.7  
AE014297-4665|AAF57087.2|  882|Drosophila melanogaster CG31012-P...    31   2.7  
AF096284-1|AAD17844.1|  535|Drosophila melanogaster prolyl 4-hyd...    30   6.3  

>AY095052-1|AAM11380.1|  365|Drosophila melanogaster LD40833p
           protein.
          Length = 365

 Score = 33.1 bits (72), Expect = 0.90
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460
           V +P EK + +N+ST G+  +       +DS  KQ        ++ +E P +   N   D
Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291

Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484
              I     K+  T+K  +P VKT
Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315


>AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin
           assembly factor-1 p180subunit protein.
          Length = 1183

 Score = 33.1 bits (72), Expect = 0.90
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460
           V +P EK + +N+ST G+  +       +DS  KQ        ++ +E P +   N   D
Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291

Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484
              I     K+  T+K  +P VKT
Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315


>AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-PB
           protein.
          Length = 1183

 Score = 33.1 bits (72), Expect = 0.90
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 401 VLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAILFNDNMEELPLSGNHNPIQD 460
           V +P EK + +N+ST G+  +       +DS  KQ        ++ +E P +   N   D
Sbjct: 234 VQTPREK-SPENSSTSGKHTEEVMQKNGKDSK-KQEESMKAVKESKKEEPKTAEQNKKND 291

Query: 461 MTNIGKRTTKRKSTDKAKRPGVKT 484
              I     K+  T+K  +P VKT
Sbjct: 292 QATIDLFMGKKMETNKKDKPEVKT 315


>BT024446-1|ABC86508.1| 1482|Drosophila melanogaster HL01030p
           protein.
          Length = 1482

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 234 CNKQDADDAGLLTCGYCKKSQHAACFGVREEAAPR 268
           C +QD++D   + C  C+K+ HA+C      A P+
Sbjct: 256 CRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPK 290


>AE013599-3723|AAF47094.2| 1482|Drosophila melanogaster CG5591-PA
           protein.
          Length = 1482

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 234 CNKQDADDAGLLTCGYCKKSQHAACFGVREEAAPR 268
           C +QD++D   + C  C+K+ HA+C      A P+
Sbjct: 256 CRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPK 290


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
           protein.
          Length = 3146

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 218 EQHSTGTDAEAQ----VRCPCNKQDADDAGLLTCGYCKKSQHAACFGVREEAAP 267
           E+  T  +AEA+     RC C     DD  ++ C  C   QH  C G+  +  P
Sbjct: 839 EETETAPEAEAEDDSVTRCICELTH-DDGYMICCDKCSAWQHVDCMGIDRQNIP 891


>BT009935-1|AAQ22404.1|  880|Drosophila melanogaster SD08724p
           protein.
          Length = 880

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380
           GE+  +  + P N +K++       + E P     T  Q       +  S    TN SN 
Sbjct: 293 GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 351

Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440
                + T  Q  Q + +G   S   K+ ++ T   G    +   STT  S+    +++ 
Sbjct: 352 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 405

Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482
              D++ ++ LS    P  ++    +++ + K+ D  K PGV
Sbjct: 406 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 445


>AE014297-4666|AAN14260.2|  635|Drosophila melanogaster CG31012-PD,
           isoform D protein.
          Length = 635

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380
           GE+  +  + P N +K++       + E P     T  Q       +  S    TN SN 
Sbjct: 48  GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 106

Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440
                + T  Q  Q + +G   S   K+ ++ T   G    +   STT  S+    +++ 
Sbjct: 107 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 160

Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482
              D++ ++ LS    P  ++    +++ + K+ D  K PGV
Sbjct: 161 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 200


>AE014297-4665|AAF57087.2|  882|Drosophila melanogaster CG31012-PC,
           isoform C protein.
          Length = 882

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 321 GELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFFKTNESNI 380
           GE+  +  + P N +K++       + E P     T  Q       +  S    TN SN 
Sbjct: 295 GEIRGKVGVFPDNFVKMLAPSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSN- 353

Query: 381 VERLLAETLSQGSQSDPVGDVLSPLEKINLQNTSTLGRVVQAEAPSTTEDSTLKQYRDAI 440
                + T  Q  Q + +G   S   K+ ++ T   G    +   STT  S+    +++ 
Sbjct: 354 -SSTTSVTTQQ--QKEQIGGSSSTTSKVYIKKT---GSSSNSTTSSTTTASSSAGRKESF 407

Query: 441 LFNDNMEELPLSGNHNPIQDMTNIGKRTTKRKSTDKAKRPGV 482
              D++ ++ LS    P  ++    +++ + K+ D  K PGV
Sbjct: 408 GSRDSLNDI-LSETGLPTGNVA-AQRKSLENKNLDLTKPPGV 447


>AF096284-1|AAD17844.1|  535|Drosophila melanogaster prolyl
           4-hydroxylase alpha subunit protein.
          Length = 535

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 21/90 (23%), Positives = 38/90 (42%)

Query: 314 RASQLRAGELADRFQLSPLNALKLMKLLHSHGVIEDPGTDLATPRQIIKDELKNVMSKFF 373
           R   L A +  D +  +P+NA +L+K LHS     +      + R    D + N+     
Sbjct: 64  RVEHLNAADGIDDYLNNPVNAFRLIKRLHSDWETFEGSVTADSSRSNYLDTMANLKENLS 123

Query: 374 KTNESNIVERLLAETLSQGSQSDPVGDVLS 403
             ++ + V   +A T  Q +    V ++ S
Sbjct: 124 FPSQDDFVGSAIALTRLQQTYQLDVAELAS 153


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.131    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,040,048
Number of Sequences: 52641
Number of extensions: 879125
Number of successful extensions: 2703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2687
Number of HSP's gapped (non-prelim): 23
length of query: 494
length of database: 24,830,863
effective HSP length: 88
effective length of query: 406
effective length of database: 20,198,455
effective search space: 8200572730
effective search space used: 8200572730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)

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