GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001063-TA|BGIBMGA001063-PA|IPR003511|DNA-binding HORMA,
IPR011011|Zinc finger, FYVE/PHD-type
         (494 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    30   0.12 
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    26   2.7  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   8.1  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 0.12
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 148 VSLRLYYNDETPEGYQAPGFLSTLESEDHLAPSYGDAVKLGSVETPYH 195
           +S+   Y D+ P     PG      S+   A   G A+ +G  ETP H
Sbjct: 10  ISVLKTYQDKAPRSLHGPGLSLVHPSKAGAATGPGGAIVVGRAETPDH 57


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 430 DSTLKQYRDAILFNDNMEELPLSGNHNPIQDMT 462
           D  L +    I FNDN++ + L    +PI++ T
Sbjct: 132 DIALLELESEITFNDNLQPVSLPEQDDPIEEGT 164


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 62  KKYLHQLALCFYEGECKVENLIEYHIFE---YSYNPDGVTMXXXXXXXXXXXXXXXYSFD 118
           KK L ++ L     EC   NL+E  IF+   Y+ NP+ +                   F+
Sbjct: 105 KKVLDRMLLDLICKECLPFNLVESEIFKKFVYTLNPNYIMPTRKSLSNALLPSVYNQEFE 164

Query: 119 NVRER 123
             +E+
Sbjct: 165 KAKEK 169


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,023
Number of Sequences: 2123
Number of extensions: 17958
Number of successful extensions: 60
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 58
Number of HSP's gapped (non-prelim): 4
length of query: 494
length of database: 516,269
effective HSP length: 67
effective length of query: 427
effective length of database: 374,028
effective search space: 159709956
effective search space used: 159709956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)