Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001062-TA|BGIBMGA001062-PA|IPR004910|Yippee-like protein
         (121 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.47 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   0.82 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   0.82 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   3.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   4.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   4.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    20   5.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   7.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   7.7  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory
          receptor candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 0.47
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 26 NRSELISTRFTGATGRAFLFHKVVNLIYSEV 56
          NRSELI+++        FL    V +I S +
Sbjct: 9  NRSELITSKIVSFVNSIFLVMSAVTIILSSL 39


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 0.82
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 11  GTRLFSCASCDVNLTNRSELIS 32
           G++ F C  CD    N+S L S
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNS 276


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 0.82
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 11 GTRLFSCASCDVNLTNRSELIS 32
          G++ F C  CD    N+S L S
Sbjct: 13 GSKPFQCNKCDYTCVNKSMLNS 34


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 39 TGRAFLFHKVVNLIYSEVQDRVMLTGRHMVRDVSCK 74
          T  A  F  ++   +SEVQ+ ++   R ++ D+S K
Sbjct: 1  TSAALCFALMLIARHSEVQESIVAEMREVLGDLSKK 36


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 74  KNCGTKLGWVYEFATEENQRYKEGRV 99
           KNC +    +Y  A++ NQ  +E +V
Sbjct: 281 KNCLSYCFNLYHLASKSNQLSREAKV 306


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 74  KNCGTKLGWVYEFATEENQRYKEGRV 99
           KNC +    +Y  A++ NQ  +E +V
Sbjct: 281 KNCLSYCFNLYHLASKSNQLSREAKV 306


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 90  ENQRYKEGRVILERALVTESD 110
           +N+R KE + + +R  VT+ D
Sbjct: 205 QNRRAKERKQVKKREEVTQKD 225


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 95  KEGRVILERALVTESDGIEEI 115
           K+G VILE    +E+D + ++
Sbjct: 623 KDGHVILETFHFSEADFVMDV 643


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 95  KEGRVILERALVTESDGIEEI 115
           K+G VILE    +E+D + ++
Sbjct: 623 KDGHVILETFHFSEADFVMDV 643


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.138    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,072
Number of Sequences: 317
Number of extensions: 890
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 121
length of database: 114,650
effective HSP length: 50
effective length of query: 71
effective length of database: 98,800
effective search space:  7014800
effective search space used:  7014800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)