Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001062-TA|BGIBMGA001062-PA|IPR004910|Yippee-like protein
(121 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11230.1 68416.m01366 yippee family protein similar to qdgl-1... 109 4e-25
At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1... 108 9e-25
At2g40110.2 68415.m04930 yippee family protein similar to mdgl-1... 105 1e-23
At4g27740.1 68417.m03986 yippee family protein similar to qdgl-1... 103 4e-23
At3g55890.1 68416.m06211 yippee family protein similar to mdgl-1... 101 2e-22
At3g08990.1 68416.m01051 yippee family protein similar to qdgl-1... 97 3e-21
At5g53940.1 68418.m06711 yippee family protein similar to mdgl-1... 94 3e-20
At3g21930.1 68416.m02764 receptor-like protein kinase-related co... 29 0.64
At3g21920.1 68416.m02763 pollen coat receptor kinase, putative c... 29 0.64
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 29 0.85
At4g32810.1 68417.m04667 dioxygenase-related low similarity to b... 26 7.9
At1g27695.1 68414.m03385 glycine-rich protein 26 7.9
>At3g11230.1 68416.m01366 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein [Homo
sapiens] GI:5713281; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 129
Score = 109 bits (263), Expect = 4e-25
Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG++FL ++ G + +SC C NL +++S F G+A+LF KVVN+ + +DR+
Sbjct: 1 MGRLFLVNLEG-KSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRM 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 111
M+TG H V D+ C CG+ +GW YEFA E+NQ+YKEG+ +LER V DG
Sbjct: 60 MMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDG 110
>At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 130
Score = 108 bits (260), Expect = 9e-25
Identities = 46/111 (41%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG++F+ ++ G +++SC C +L ++IS F G+A+LF+KV N+ E ++R+
Sbjct: 1 MGRLFVVNLEG-KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERL 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 111
M+TG+H V D+ C +CG+ +GW YE A E+NQ+YKEG+ +LER ++ DG
Sbjct: 60 MMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDG 110
>At2g40110.2 68415.m04930 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 110
Score = 105 bits (251), Expect = 1e-23
Identities = 44/103 (42%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG++F+ ++ G +++SC C +L ++IS F G+A+LF+KV N+ E ++R+
Sbjct: 1 MGRLFVVNLEG-KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERL 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILER 103
M+TG+H V D+ C +CG+ +GW YE A E+NQ+YKEG+ +LER
Sbjct: 60 MMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLER 102
>At4g27740.1 68417.m03986 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein [Homo
sapiens] GI:5713281; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 148
Score = 103 bits (246), Expect = 4e-23
Identities = 45/100 (45%), Positives = 64/100 (64%)
Query: 11 GTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRVMLTGRHMVRD 70
G RL+SC +C ++ ++IS F G TGRAFLF +N++ +DR +LTG H V D
Sbjct: 48 GPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGLHTVAD 107
Query: 71 VSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESD 110
+SC +C LGW YE A E +Q+YKEG+ I E+A + + D
Sbjct: 108 ISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKED 147
>At3g55890.1 68416.m06211 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 121
Score = 101 bits (241), Expect = 2e-22
Identities = 45/121 (37%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG++F+ + G ++ C C +L+ +++S F GRA+LF+ VVN+ E +DR+
Sbjct: 1 MGRVFMVDLEGN-IYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRM 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQVNVD 120
M+TG H V D+ C CG+ +GW YEFA E++Q+YKEG+ +LE ++ ++ + D
Sbjct: 60 MITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDLVSDGD 119
Query: 121 D 121
D
Sbjct: 120 D 120
>At3g08990.1 68416.m01051 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein
[Drosophila melanogaster] GI:5713279; contains Pfam
profile PF03226: Yippee putative zinc-binding protein
Length = 128
Score = 97.1 bits (231), Expect = 3e-21
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG++F+ + G ++SC C + +++IS F GRA+LF VVN+ E + RV
Sbjct: 1 MGRLFVIDLEGL-VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRV 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILER 103
M+TG H V D+ C +CG+ +GW YE A +++Q+YKEG+ ILER
Sbjct: 60 MITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILER 102
>At5g53940.1 68418.m06711 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 129
Score = 93.9 bits (223), Expect = 3e-20
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 1 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 60
MG+IF + G R + C C +L +L+S F G+A+LF++ VN+ +++R+
Sbjct: 1 MGRIFTVELEG-RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERL 59
Query: 61 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA-LVTESDGIEEIQVN 118
ML+G H V D+ C CG +GW YE A E+ Q+YKEG+ +LER +V E D E+ ++
Sbjct: 60 MLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYID 118
>At3g21930.1 68416.m02764 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]
Length = 300
Score = 29.5 bits (63), Expect = 0.64
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 53 YSEVQDRVMLTGRHMV--RDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESD 110
Y + D V +T + + R C++C G YE + RYKE + ++ LV S
Sbjct: 109 YGKEPDMVSITYQCRIDSRGPKCQSCVVTAG--YELLRKRCPRYKEAIIWYDQCLVEFSS 166
Query: 111 GIEEIQVNVDD 121
Q+N DD
Sbjct: 167 LDTSGQINYDD 177
>At3g21920.1 68416.m02763 pollen coat receptor kinase, putative
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]; similar to
receptor-like protein kinase homolog RK20-1 (GI:4530126)
[Phaseolus vulgaris]
Length = 278
Score = 29.5 bits (63), Expect = 0.64
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 53 YSEVQDRVMLTGRHMV--RDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESD 110
Y + D V +T + + R C++C G YE + RYKE + ++ LV S
Sbjct: 87 YGKEPDMVSITYQCRIDSRGPKCQSCVVTAG--YELLRKRCPRYKEAIIWYDQCLVEFSS 144
Query: 111 GIEEIQVNVDD 121
Q+N DD
Sbjct: 145 LDTSGQINYDD 155
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 70 DVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEI 115
D++CK+ +LG + A +++ YKE ++++E+ L + S G E +
Sbjct: 1059 DITCKSAEHRLGMDFAQAYKDSTLYKENKMVVEQ-LSSASLGSEAL 1103
>At4g32810.1 68417.m04667 dioxygenase-related low similarity to
b,b-carotene-9',10'-dioxygenase [Mus musculus]
GI:12666529; contains Pfam profile PF03055: Retinal
pigment epithelial membrane protein
Length = 570
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 65 RHMVRDVSCKNCGTKLGWVYEFATEEN 91
R +V V C++ GWV+ FA EN
Sbjct: 286 REVVGRVRCRSGSWGPGWVHSFAVTEN 312
>At1g27695.1 68414.m03385 glycine-rich protein
Length = 91
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 76 CGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQVNV 119
CG LG + F T Y+ R+ + + +D EE+ N+
Sbjct: 43 CGVGLGLGWGFGTAFGSHYRSSRLTFQGIELETADKREEVVANM 86
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.138 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,659,247
Number of Sequences: 28952
Number of extensions: 94625
Number of successful extensions: 248
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 237
Number of HSP's gapped (non-prelim): 13
length of query: 121
length of database: 12,070,560
effective HSP length: 73
effective length of query: 48
effective length of database: 9,957,064
effective search space: 477939072
effective search space used: 477939072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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