Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001062-TA|BGIBMGA001062-PA|IPR004910|Yippee-like protein
(121 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44) 67 3e-12
SB_23989| Best HMM Match : Yippee (HMM E-Value=2.8e-09) 61 2e-10
SB_15980| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.45
SB_4457| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.45
SB_3861| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.45
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 27 4.2
SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3) 27 4.2
SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_46908| Best HMM Match : MORN (HMM E-Value=2.52234e-44) 26 7.3
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 26 7.3
>SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44)
Length = 972
Score = 67.3 bits (157), Expect = 3e-12
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 39 TGRAFLFHKVVNLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGR 98
T R F VN+ ++RV+LTG H V D+ C+ C T LGW YE A E +Q+YKEG+
Sbjct: 898 TLRFVYFISSVNVGCGPAEERVLLTGLHAVSDIFCECCKTTLGWKYEHAFEISQKYKEGK 957
Query: 99 VILERALVTESDGIE 113
I+E A + + +G E
Sbjct: 958 YIIEMAHMIKDNGWE 972
>SB_23989| Best HMM Match : Yippee (HMM E-Value=2.8e-09)
Length = 93
Score = 61.3 bits (142), Expect = 2e-10
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 49 VNLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALV 106
VNL ++R +LTG H+V D+ C C T +GW Y A EE ++YK G+ ILERA +
Sbjct: 2 VNLTTGIAEERTLLTGVHVVADLYCNKCATYVGWKYIDAYEEKEKYKVGKFILERAKI 59
>SB_15980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 50 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLG 81
N + +E DR+ T + R + C +CG KLG
Sbjct: 94 NELTAEHNDRIQATAENTSRSMFCSHCGRKLG 125
>SB_4457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1328
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 50 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLG 81
N + +E DR+ T + R + C +CG KLG
Sbjct: 712 NELTAEHNDRIQATAENTSRSMFCSHCGRKLG 743
>SB_3861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 50 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLG 81
N + +E DR+ T + R + C +CG KLG
Sbjct: 25 NELTAEHNDRIQATAENTSRSMFCSHCGRKLG 56
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 50 NLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLG 81
N + +E DR+ T + R + C CG KLG
Sbjct: 1075 NELTAEHNDRIQATAENTSRSMFCSYCGRKLG 1106
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 89 EENQRYKEGRVILERALVTESDGIEEIQV 117
EE+ R +E ++ E A+V ES+ +EE ++
Sbjct: 631 EESLRLEESAIVEESAIVEESEIVEESEI 659
>SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3)
Length = 984
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 89 EENQRYKEGRVILERALVTESDGIEEIQV 117
EE+ R +E ++ E A+V ES+ +EE ++
Sbjct: 631 EESLRLEESAIVEESAIVEESEIVEESEI 659
>SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1419
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 59 RVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQV 117
+V +T R +V K C T+LG ++ E + K+G V E L T I E V
Sbjct: 340 KVRITKR--TSEVKTKPCSTRLGILWLVTVRERKVVKQGGV-TEEVLTTSEHVISETGV 395
>SB_46908| Best HMM Match : MORN (HMM E-Value=2.52234e-44)
Length = 241
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 79 KLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQ 116
K G VYE + E++++ EG++I V E D +++++
Sbjct: 72 KDGSVYEGSFHEHKKHGEGKMIYINGDVYEGDWVKDLR 109
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 26.2 bits (55), Expect = 7.3
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 6 LDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRVMLTGR 65
L+H R SC CD T + FT +A + +E +V
Sbjct: 1145 LEHAKTERDISCPKCDRTFTEERHMRCHLFT-HQAQAVKCDVCQKMCRNENALKVHKGRE 1203
Query: 66 HMVRDVSCKNCGTK 79
H V + C++CG K
Sbjct: 1204 HSVLEFICEHCGKK 1217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.138 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,718,445
Number of Sequences: 59808
Number of extensions: 135763
Number of successful extensions: 253
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 20
length of query: 121
length of database: 16,821,457
effective HSP length: 74
effective length of query: 47
effective length of database: 12,395,665
effective search space: 582596255
effective search space used: 582596255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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