Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001062-TA|BGIBMGA001062-PA|IPR004910|Yippee-like protein
(121 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical pr... 105 6e-24
AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical ... 99 7e-22
AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical ... 99 7e-22
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 55 2e-08
L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily as... 27 3.6
L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily ass... 27 3.6
AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical ... 26 6.4
Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical pr... 26 8.4
>Z35600-4|CAB54236.1| 137|Caenorhabditis elegans Hypothetical
protein F37A8.5 protein.
Length = 137
Score = 105 bits (253), Expect = 6e-24
Identities = 48/104 (46%), Positives = 68/104 (65%)
Query: 11 GTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRVMLTGRHMVRD 70
G R +SC C NL +ELIS F G+ G+A+LF+ VVN+ ++RV+LTG H V D
Sbjct: 30 GDRCYSCIHCRANLAAHAELISKSFQGSQGKAYLFNAVVNVGCGPAEERVLLTGLHAVAD 89
Query: 71 VSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEE 114
+ C+ C T LGW YE A E +Q+YKEG+ I+E A + + +G +E
Sbjct: 90 IYCEICKTTLGWKYEHAFESSQKYKEGKFIIELAHMVKDNGWDE 133
>AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical
protein B0546.4b protein.
Length = 134
Score = 99.1 bits (236), Expect = 7e-22
Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 MGKIFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDR 59
MG+ F G L+ C C+ LT EL S FTG+TG A LF + N++Y + R
Sbjct: 1 MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHR 60
Query: 60 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA 104
M TG H VRDV C C KLGW+YE A E+Q YKE +VI+E A
Sbjct: 61 KMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIENA 105
>AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical
protein B0546.4a protein.
Length = 161
Score = 99.1 bits (236), Expect = 7e-22
Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 MGKIFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDR 59
MG+ F G L+ C C+ LT EL S FTG+TG A LF + N++Y + R
Sbjct: 1 MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHR 60
Query: 60 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA 104
M TG H VRDV C C KLGW+YE A E+Q YKE +VI+E A
Sbjct: 61 KMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIENA 105
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 54.8 bits (126), Expect = 2e-08
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 72 SCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEI-QVN 118
S K+C +LGW+YE A +N++YKEG VILER +TE + +I Q+N
Sbjct: 3 SVKSCRAQLGWMYELAPNDNEKYKEGSVILERMNITEREAFSKISQMN 50
>L16621-10|AAA28227.1| 507|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform a protein.
Length = 507
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 46 HKVVNLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATE 89
+K+VNL Y+ D+ D + + G LGW ++ TE
Sbjct: 324 YKIVNLYYNYTGDKSTHCANAAKCDSAYGSLGDPLGWPFQTCTE 367
>L16621-9|AAL11487.1| 568|Caenorhabditis elegans Temporarily
assigned gene nameprotein 282, isoform b protein.
Length = 568
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 46 HKVVNLIYSEVQDRVMLTGRHMVRDVSCKNCGTKLGWVYEFATE 89
+K+VNL Y+ D+ D + + G LGW ++ TE
Sbjct: 385 YKIVNLYYNYTGDKSTHCANAAKCDSAYGSLGDPLGWPFQTCTE 428
>AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical
protein B0273.3 protein.
Length = 425
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 11 GTRLFSCASCDVNLTNRSE--LISTRFTGATGRAFLFHKVVNLIYSEVQDRVMLTGRHMV 68
G A ++N+ + + +IST R +H++ +V DR+ LTG H +
Sbjct: 158 GEAALPTAKVELNMDHPEKDLIISTSVYLGYTRTLQYHEIRLGRLMKVTDRLELTGDHTL 217
Query: 69 RDV-SCKNCGTKLGWVYEFATEENQRYKE 96
RD+ + +C + +F +E+ +K+
Sbjct: 218 RDLKNAFSCPIDFSFSDDF-SEKKPSFKD 245
>Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical
protein M18.6 protein.
Length = 414
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 71 VSCKNCGTKLGWVYEFATEENQRY 94
+ C C LGW Y T E +R+
Sbjct: 341 IQCSRCHEHLGWEYISMTREPRRF 364
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.138 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,732,478
Number of Sequences: 27539
Number of extensions: 96426
Number of successful extensions: 229
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 222
Number of HSP's gapped (non-prelim): 8
length of query: 121
length of database: 12,573,161
effective HSP length: 73
effective length of query: 48
effective length of database: 10,562,814
effective search space: 507015072
effective search space used: 507015072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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