Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001061-TA|BGIBMGA001061-PA|IPR005123|2OG-Fe(II)
oxygenase, IPR013216|Methyltransferase type 11
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36310.1 68414.m04513 expressed protein 119 6e-27
At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase fa... 109 4e-24
At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase fa... 108 1e-23
At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase fa... 108 1e-23
At4g02485.1 68417.m00337 oxidoreductase, 2OG-Fe(II) oxygenase fa... 48 2e-05
At4g13960.1 68417.m02159 F-box family protein contains F-box dom... 33 0.54
At2g27070.1 68415.m03252 two-component responsive regulator fami... 33 0.71
At1g34355.1 68414.m04265 forkhead-associated domain-containing p... 31 2.2
At4g31570.1 68417.m04483 expressed protein 31 2.9
At1g50940.1 68414.m05727 electron transfer flavoprotein alpha su... 31 2.9
At5g06520.1 68418.m00735 SWAP (Suppressor-of-White-APricot)/surp... 30 5.0
At2g45100.1 68415.m05613 transcription factor IIB (TFIIB) family... 30 5.0
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 29 6.6
At2g24300.2 68415.m02904 calmodulin-binding protein similar to c... 29 8.7
At2g24300.1 68415.m02905 calmodulin-binding protein similar to c... 29 8.7
>At1g36310.1 68414.m04513 expressed protein
Length = 404
Score = 119 bits (286), Expect = 6e-27
Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Query: 351 IEDIHVHQVYEQIAGHFSTTRHKPWPKVVDFMQHVPAGSIVLDLGCGNGKNILNRTDILQ 410
IE +VH+VY+ IA HFS+TR WPKV F++ +P+GS++LD GCGNGK +
Sbjct: 71 IEKKYVHRVYDAIAPHFSSTRFAKWPKVAAFLESLPSGSVILDAGCGNGKYLGLNPSCFF 130
Query: 411 VAGERSSGLLEECKGLTARISGADCIRLDLLNTGLKDECADFIICVAVVHHFSTQARRLH 470
+ + S L++ C G + + D +N ++E D I +AV+HH ST+ RR
Sbjct: 131 IGCDISHPLIKICSD-----KGQEVLVADAVNLPYREEFGDAAISIAVLHHLSTENRRKK 185
Query: 471 SLQTIHRLLRTNGQALITVWAKDQTKSSYLSRTRAPLLDRHKLTVVGIHLPVHENRTQ 528
+++ + R+++ G LITVWA +Q +S L++ PL ++ VG P++ R +
Sbjct: 186 AIEELVRVVKPGGFVLITVWAAEQEDTSLLTKW-TPLSAKYVEEWVGPGSPMNSPRVR 242
Score = 46.0 bits (104), Expect = 7e-05
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 556 RYYHVFDEGELDQLCRDARLA-IVRSFYEEGNWCVVCMK 593
RYYHVF EGEL++L A IV F+++ NWC+V K
Sbjct: 360 RYYHVFSEGELERLASGVGNAMIVDRFFDKSNWCIVLQK 398
>At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 344
Score = 109 bits (263), Expect = 4e-24
Identities = 99/333 (29%), Positives = 145/333 (43%), Gaps = 48/333 (14%)
Query: 33 NVILCNVGQATGFDKQKLLKLLTEY-KVNTPLPKFVAEKGESYSYLMFDKAENASLFYEA 91
N+ + N G A G + + E+ +VN + A+ + F +A EA
Sbjct: 25 NLYVANCGPAVGLTHNAIAAVFAEFGEVNGV---YAADDSGVRVIVSFADPFSAKAALEA 81
Query: 92 CNGKAQVDENGTTLYVTF--------VENVPDTDIICKHPNPKGLHIIPDFLTEDEEKLF 143
+G+ D G +L++ + V + +I N GL ++PDF+T EE+
Sbjct: 82 LSGRPCPDLKGRSLHIRYSVLQLPSEVNDCVPVSLIDSELNIPGLFLLPDFVTVAEEQQL 141
Query: 144 LNTFNIQHVETTLKNRQVKHYGYEFRYGSNDVDLSCPLQEKIPKICKLLWRRLQHYGYDL 203
L + +H L R+V+HYGYEF YG+ +VD L E + +L R +D
Sbjct: 142 LAAVDARHW-IGLAKRRVQHYGYEFCYGTRNVDTKKRLGELPSFVSPILERIYLFPNFDN 200
Query: 204 GVPV----QLTVNKYLPGQGIPSHVDKHSPFGETILALSLGSNVVMD--------WKHHT 251
G QLTVN+Y G G+ H+D HS F + I +LSL +M+ WK T
Sbjct: 201 GSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKAST 260
Query: 252 GK----------YVPVMVEARSMMIMQDEARYDWQHGIQPRMWDPVLDVRLIDNEKVKVI 301
+ + RSM+++ EARY W H I P ID K KVI
Sbjct: 261 TDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYI-PH--------HKIDKVKDKVI 311
Query: 302 TSDTVQREMRISLTFRWTRCGPCKCEYKMLCDS 334
+ R+S T R R PC C+Y CDS
Sbjct: 312 R----RSSRRVSFTLRKVRNHPCSCKYPQYCDS 340
>At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 108 bits (259), Expect = 1e-23
Identities = 99/335 (29%), Positives = 145/335 (43%), Gaps = 50/335 (14%)
Query: 33 NVILCNVGQATGFDKQKLLKLLTEY-KVNTPLPKFVAEKGESYSYLMFDKAENASLFYEA 91
N+ + N G A G + + E+ +VN + A+ + F +A EA
Sbjct: 110 NLYVANCGPAVGLTHNAIAAVFAEFGEVNGV---YAADDSGVRVIVSFADPFSAKAALEA 166
Query: 92 CNGKAQVDENGTTLYVTF----------VENVPDTDIICKHPNPKGLHIIPDFLTEDEEK 141
+G+ D G +L++ + V + +I N GL ++PDF+T EE+
Sbjct: 167 LSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLIDSELNIPGLFLLPDFVTVAEEQ 226
Query: 142 LFLNTFNIQHVETTLKNRQVKHYGYEFRYGSNDVDLSCPLQEKIPKICKLLWRRLQHYGY 201
L + +H L R+V+HYGYEF YG+ +VD L E + +L R +
Sbjct: 227 QLLAAVDARHW-IGLAKRRVQHYGYEFCYGTRNVDTKKRLGELPSFVSPILERIYLFPNF 285
Query: 202 DLGVPV----QLTVNKYLPGQGIPSHVDKHSPFGETILALSLGSNVVMD--------WKH 249
D G QLTVN+Y G G+ H+D HS F + I +LSL +M+ WK
Sbjct: 286 DNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKA 345
Query: 250 HTGK----------YVPVMVEARSMMIMQDEARYDWQHGIQPRMWDPVLDVRLIDNEKVK 299
T + + RSM+++ EARY W H I P ID K K
Sbjct: 346 STTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYI-PH--------HKIDKVKDK 396
Query: 300 VITSDTVQREMRISLTFRWTRCGPCKCEYKMLCDS 334
VI + R+S T R R PC C+Y CDS
Sbjct: 397 VIR----RSSRRVSFTLRKVRNHPCSCKYPQYCDS 427
>At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 108 bits (259), Expect = 1e-23
Identities = 99/335 (29%), Positives = 145/335 (43%), Gaps = 50/335 (14%)
Query: 33 NVILCNVGQATGFDKQKLLKLLTEY-KVNTPLPKFVAEKGESYSYLMFDKAENASLFYEA 91
N+ + N G A G + + E+ +VN + A+ + F +A EA
Sbjct: 110 NLYVANCGPAVGLTHNAIAAVFAEFGEVNGV---YAADDSGVRVIVSFADPFSAKAALEA 166
Query: 92 CNGKAQVDENGTTLYVTF----------VENVPDTDIICKHPNPKGLHIIPDFLTEDEEK 141
+G+ D G +L++ + V + +I N GL ++PDF+T EE+
Sbjct: 167 LSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLIDSELNIPGLFLLPDFVTVAEEQ 226
Query: 142 LFLNTFNIQHVETTLKNRQVKHYGYEFRYGSNDVDLSCPLQEKIPKICKLLWRRLQHYGY 201
L + +H L R+V+HYGYEF YG+ +VD L E + +L R +
Sbjct: 227 QLLAAVDARHW-IGLAKRRVQHYGYEFCYGTRNVDTKKRLGELPSFVSPILERIYLFPNF 285
Query: 202 DLGVPV----QLTVNKYLPGQGIPSHVDKHSPFGETILALSLGSNVVMD--------WKH 249
D G QLTVN+Y G G+ H+D HS F + I +LSL +M+ WK
Sbjct: 286 DNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRYSVSTWKA 345
Query: 250 HTGK----------YVPVMVEARSMMIMQDEARYDWQHGIQPRMWDPVLDVRLIDNEKVK 299
T + + RSM+++ EARY W H I P ID K K
Sbjct: 346 STTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYI-PH--------HKIDKVKDK 396
Query: 300 VITSDTVQREMRISLTFRWTRCGPCKCEYKMLCDS 334
VI + R+S T R R PC C+Y CDS
Sbjct: 397 VIR----RSSRRVSFTLRKVRNHPCSCKYPQYCDS 427
>At4g02485.1 68417.m00337 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam domain PF03171, 2OG-Fe(II)
oxygenase superfamily
Length = 226
Score = 48.0 bits (109), Expect = 2e-05
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 208 QLTVNKYLPGQGIPSHVDKHSPFGETILALSLGSNVVMDW---KHHTGKYVPVMVEARSM 264
QL VN Y PG+GI +HVD F + I +SL S VM + + + + V V++ S+
Sbjct: 122 QLIVNLYQPGEGICAHVDL-LRFEDGIAIVSLESPCVMRFSPAEKNEYEAVDVLLNPGSL 180
Query: 265 MIMQDEARYDWQHGI 279
++M EARY W+H I
Sbjct: 181 ILMSGEARYRWKHEI 195
>At4g13960.1 68417.m02159 F-box family protein contains F-box domain
Pfam:PF00646
Length = 434
Score = 33.1 bits (72), Expect = 0.54
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 175 VDLSCPLQEKIPKICKLLWRRLQHYGYDLGVPVQLTVNKYL 215
++ S P + ++P++C+ + ++HYG VQL V YL
Sbjct: 387 IEESGPPKLRVPQVCEFIAEMMEHYGKSSSFNVQLLVGGYL 427
>At2g27070.1 68415.m03252 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 575
Score = 32.7 bits (71), Expect = 0.71
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 144 LNTFNIQHVET--TLKNRQVKHYGYEFRYGSNDVDLSCPLQEK----IPKICKLLWRRLQ 197
+N+ N+ HV T + KNR+ K G G + LS P ++K + L + +Q
Sbjct: 187 VNSTNVSHVSTNGSRKNRKRKPKGGPSDDGES---LSQPPKKKKIWWTNPLQDLFLQAIQ 243
Query: 198 HYGYDLGVPVQL--TVN-KYLPGQGIPSHVDKHSPFGETIL 235
H GYD VP ++ +N YL + + SH+ K+ F + ++
Sbjct: 244 HIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRVV 284
>At1g34355.1 68414.m04265 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1477
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 93 NGKAQVDENGTTLYVTFVENVPDTDIICKHPNPKGLHIIPDFLTEDEEKLFLNTFNIQHV 152
NG D++G + V PD DI+ HP+ H+ ++ +KLF+ + H
Sbjct: 49 NGSTVSDDDGEVEEILVVGRHPDCDILLTHPSISRFHLEIRSIS-SRQKLFVTDLSSVH- 106
Query: 153 ETTLKNRQVKHYG 165
T +++ +++ +G
Sbjct: 107 GTWVRDLRIEPHG 119
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.7 bits (66), Expect = 2.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 144 LNTFNIQHVETTLKNRQVKHYGYEFRYGSNDVDLSC 179
+N +E+ + +KHY YE ++ ++D++L C
Sbjct: 969 INVLEADTIESKVSFEALKHYSYELQHKNHDLELLC 1004
>At1g50940.1 68414.m05727 electron transfer flavoprotein alpha
subunit family protein contains Pfam profile: PF00766
electron transfer flavoprotein, alpha subunit
Length = 363
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 346 DVASNIEDIH--VHQVYEQIAGHFSTTRHKPWPKVVDFMQHVPAGSIVLDLGCGNGKNIL 403
+ AS H V +V + F + +PW K+VDF++ S +L GKNIL
Sbjct: 81 EAASQAASCHPSVSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNIL 140
Query: 404 NRTDIL 409
R L
Sbjct: 141 PRVAAL 146
>At5g06520.1 68418.m00735 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam profile: PF01805
surp module
Length = 679
Score = 29.9 bits (64), Expect = 5.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 423 CKGLTARISGADCIRLDLLNTGLKDECADFIICVAVVHHFSTQARRLHSLQT 474
C L R G D +DLL+ + E AD+ V H STQ + H+ +T
Sbjct: 567 CLQLEKREEGVDIDMIDLLDCFARLEDADYSANVPQPQHLSTQMQPPHTPET 618
>At2g45100.1 68415.m05613 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 565
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 359 VYEQIAGHFSTTRHKPWPKVVDFMQHVPAGSIVLDLGCGNGKNILNRTDIL-------QV 411
VY Q+ T + + K+VD +P S +L G N K +L T I+
Sbjct: 154 VYLQLCDMLYITENHNYEKLVDPSIFIPRFSNMLLKGAHNNKLVLTATHIIASMKRDWMQ 213
Query: 412 AGERSSGLLEECKGLTARISGADCIRLDLLN 442
G + SG+ A G C + D++N
Sbjct: 214 TGRKPSGICGAALYTAALSHGIKCSKTDIVN 244
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 29.5 bits (63), Expect = 6.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 390 IVLDLGCGNGKNILNRTDILQVAGERSSGLLEECK-GLTARISGADCIRLDLLNTGLKDE 448
I LDLGC KN+ D+ ++ LL CK G AR S C L L + +
Sbjct: 100 IYLDLGCALLKNVFTGWDVREMLHYSHEHLLRRCKPGQDARGSCLLC-ELPLSPSSI--- 155
Query: 449 CADFIICVAVVH 460
C + C + +H
Sbjct: 156 CYGCVYCYSFLH 167
>At2g24300.2 68415.m02904 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 599
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 340 PETISNDVASNIEDIHVHQVYEQIAGHFSTTRHKPWPKVVDFMQ 383
P+ +S A N + +H + + GH + + P P+ +D+ Q
Sbjct: 402 PKMVSAQTAPNHQQLHNQNNRQTVQGHQNAITYSPVPQPIDYPQ 445
>At2g24300.1 68415.m02905 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 552
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 340 PETISNDVASNIEDIHVHQVYEQIAGHFSTTRHKPWPKVVDFMQ 383
P+ +S A N + +H + + GH + + P P+ +D+ Q
Sbjct: 355 PKMVSAQTAPNHQQLHNQNNRQTVQGHQNAITYSPVPQPIDYPQ 398
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.138 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,745,203
Number of Sequences: 28952
Number of extensions: 665009
Number of successful extensions: 1434
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1403
Number of HSP's gapped (non-prelim): 20
length of query: 594
length of database: 12,070,560
effective HSP length: 85
effective length of query: 509
effective length of database: 9,609,640
effective search space: 4891306760
effective search space used: 4891306760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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