Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001060-TA|BGIBMGA001060-PA|IPR000996|Clathrin light
chain
(210 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10079| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 31 0.70
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 30 1.6
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_43805| Best HMM Match : YscO (HMM E-Value=6) 30 1.6
SB_20701| Best HMM Match : DUF1027 (HMM E-Value=2.4) 30 1.6
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_31408| Best HMM Match : ENTH (HMM E-Value=0) 29 2.1
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 2.8
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 29 3.7
SB_10292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 29 3.7
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 3.7
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_55324| Best HMM Match : zf-CCHC (HMM E-Value=0.00014) 28 4.9
SB_57676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_30692| Best HMM Match : REV (HMM E-Value=3.8) 28 6.5
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_9797| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 6.5
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 6.5
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 28 6.5
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 27 8.6
SB_50076| Best HMM Match : Filament (HMM E-Value=0.15) 27 8.6
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 27 8.6
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_20042| Best HMM Match : RYDR_ITPR (HMM E-Value=0) 27 8.6
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 27 8.6
>SB_10079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 164 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQ 196
G EW +V CDF P + +DV+R+RSI LQLKQ
Sbjct: 18 GTEWEKVCRACDFNPKATKNTKDVSRMRSIFLQLKQ 53
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 121 KKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPRR 180
++ LE E++SK KA N+E KN+E +A + + + N+ V++L +
Sbjct: 334 RERLEGHLAEITEELSKEKAGNKE-LKNSEEQKAEEEKKAKRDAND--HVNQLQEKLGAA 390
Query: 181 GRDVARLRSIVLQLKQ 196
RD+ + V QLK+
Sbjct: 391 MRDLDKANDHVNQLKE 406
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 123 ELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEW 167
ELE+W K++ + K KAA RE R + ++EE E+
Sbjct: 127 ELEEWKKTYHQMKKKAKAAKREEELKEMRIEI--VNKAIEESKEF 169
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 73 LGSTPTTVFKQEREE 87
+G TP T+FKQEREE
Sbjct: 209 IGETPVTIFKQEREE 223
>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
Length = 243
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 123 ELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEW 167
ELE+W K++ + K KAA RE R + ++EE E+
Sbjct: 127 ELEEWKKTYHQMKKKAKAAKREEELKEMRIEI--VNKAIEESKEF 169
>SB_20701| Best HMM Match : DUF1027 (HMM E-Value=2.4)
Length = 229
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 121 KKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFG 177
KK+LE K +++ + RE AK +R+Q G ES+ ++E C+FG
Sbjct: 168 KKDLEKVLKKYDDYFISKRNVIRERAKFHQRSQIPG-ESAESFIRNLYELAEYCEFG 223
>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 118 QIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFG 177
QI + ED++ H++++ K + E + ++A +GN+++ + D G
Sbjct: 731 QIGDELAEDFFALHQDKLPTRKHVDMEGNEENKQAGREACSKHTPDGNQYSEREDKSD-G 789
Query: 178 PRRGRDVAR 186
R +D R
Sbjct: 790 QSRAQDSTR 798
>SB_31408| Best HMM Match : ENTH (HMM E-Value=0)
Length = 1080
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 14 DPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 71
DP ADF + + G D + +A ++++ F DF + S+SA +N + DD+
Sbjct: 720 DPFADFQSASPVKSEGFADFTQATA-----ASTSEVFGDFADFKSSSATQSNNISDDS 772
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAK 147
LQ K LED K +EQ+ K K A E K
Sbjct: 511 LQTTVKSLEDEIKKEKEQLKKNKVAQDEQGK 541
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEE 163
LQ K+ELED+ + ++Q+ + K E ++ + + E+ + E
Sbjct: 784 LQRQKQELEDYKREFQQQLQRQKQTELEDKQSELEKKIKSQENEMRE 830
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 136 SKTKAANRESAKNAERAQARGSES-SVEEGNEWARVSELCDFG 177
+KT E+ K ++ + SV+EG +W R S L DFG
Sbjct: 129 TKTDLRENENKKRGKKDDDSPTAIVSVKEGRKWQRTSPLSDFG 171
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 23 EQN-QLAGLEDELETSAPPPAISTSTNGFDDF 53
EQN +L L+D L S+P PA+ S N FDD+
Sbjct: 3654 EQNSRLKALKD-LMWSSPDPAVKLSLNPFDDY 3684
>SB_10292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 31 EDELETSAPPPAISTSTNGFDDFVEVP 57
E E+ET+ P +S + FDDF+ P
Sbjct: 29 ESEIETTPPKTTTQSSIDSFDDFLNPP 55
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEE 163
LQ K+ELED+ + ++Q+ + K E ++ + + E+ + E
Sbjct: 12 LQRQKQELEDYKREFQQQLQRQKQTELEDKQSELEKKIKSQENEMRE 58
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 80 VFKQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTK 139
V + +R+ EK +I EEQ M + KKE E K EE+ K +
Sbjct: 305 VEEMQRKTQEKKRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKKEEEKKRKEAEEKRVKEE 364
Query: 140 AANRESAKNAERAQARGSESSVEEGNE 166
E + + A R E + +E E
Sbjct: 365 QIRLEKERKRKEADDRQREEARKEEEE 391
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/85 (23%), Positives = 35/85 (41%)
Query: 82 KQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAA 141
KQ++++ +K + EE+ + KKE + + EE+ +T+A
Sbjct: 21 KQKKQKKKKEEEEEEEEENEEEERRRKRRRRRRRRRRRRKKEKKKKEEEEEEEEEETEAV 80
Query: 142 NRESAKNAERAQARGSESSVEEGNE 166
N E K E + + E EE E
Sbjct: 81 NEEEEKIEETEKEKDEEEENEEEEE 105
>SB_55324| Best HMM Match : zf-CCHC (HMM E-Value=0.00014)
Length = 344
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 128 YKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNE 166
Y EE+ + +N++SA+ AE +A S ++ EEG +
Sbjct: 300 YDCGEERHFARECSNQQSARTAEPEEATTSSATTEEGGK 338
>SB_57676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 116 MLQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSEL 173
ML+ D Y+ ++ + + + SAK+AE +A+ ++ +V++G A+ ++
Sbjct: 101 MLESIGSSFFDLYREYDGETKELFVKAKSSAKSAETGKAQKAKKAVQKGVRAAKTKKV 158
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKA-------ANRESAKNAERAQARGSESSVEEGNEWAR 169
L++ KKE E +S EEQ+S KA + RE + A AQ + E NE +
Sbjct: 591 LEVTKKEAEIKVQSVEEQLSSQKAEELLVMQSERELGEKAAMAQCEEYKKKNNELNEALQ 650
Query: 170 VSE 172
+E
Sbjct: 651 AAE 653
>SB_30692| Best HMM Match : REV (HMM E-Value=3.8)
Length = 485
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 15 PAADFL-AREQNQLAGLEDELETSAPPP 41
PA+D L ARE N L+ LE E+E +A P
Sbjct: 272 PASDSLIARETNDLSTLEGEVENTATRP 299
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 82 KQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAA 141
++ERE E+ K REE+ + ELE K++EE+I + K A
Sbjct: 1682 RRERELEERQK--REEEERRVAEMEQVKVAQEQHLYAQETDELEQLKKTYEERIEREKGA 1739
Query: 142 NRESAKNAERAQARGSESS 160
S + + R E++
Sbjct: 1740 LEASIARRKEEERRAEEAA 1758
>SB_9797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 140 AANRESAKNAERAQARGSESSVEEGNEWARV 170
A+ E +K E A A GSE++ E G E A V
Sbjct: 43 ASQAEGSKAGEAASATGSEANAEGGEENAEV 73
>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 1 MDDFGDSFVEPEVDPAADFLAREQNQLAGLEDEL 34
++D+GD+ + + DP+ L + ++AG +D+L
Sbjct: 25 VEDWGDAISDIKFDPSEVLLGEKDVEMAGTDDDL 58
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 123 ELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEW 167
E W + E + +AAN E A+ E A+ G+E S + W
Sbjct: 3441 ERAQWAQEKAESQNTIRAANEEIARLKEDARKAGTERSSDSQATW 3485
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 129 KSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPRRGRDVARLR 188
K HE +K ES+K A R +SS++E + ++ +E+ D G R R R +
Sbjct: 1437 KGHEVSEESSKMPPSESSKGASSRTPRIPKSSIDE-DHLSKETEVPDNGGRETRSKRRAQ 1495
Query: 189 S 189
+
Sbjct: 1496 N 1496
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDD 70
P + P DF A EQ+ E PPP + T + V +A+ + + LL+D
Sbjct: 54 PPLPPPPDFDALEQDNSHHHHHGKEELPPPPPLPDLTTPSNTTSTVLAANLSELDSLLED 113
Query: 71 APLGSTPTT 79
P+T
Sbjct: 114 LGKPQYPST 122
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 117 LQIAKK--ELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSE 172
L+IA+K EL + K E+Q+S+ +A +A N AQAR + EE + E
Sbjct: 493 LEIAEKKAELNEERKYFEDQVSEHEATMDFAADNLADAQARLDLRTKEENRKIEEAKE 550
>SB_50076| Best HMM Match : Filament (HMM E-Value=0.15)
Length = 380
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDF 176
LQ+ + LE + +EEQ + NR + A+ + SE +W R+ L
Sbjct: 10 LQLHIESLEQQKRRNEEQFRTARRENRRLQEETNAAKRQISE------RDW-RLEALDRD 62
Query: 177 GPRRGRDVARLRSIVLQLKQ 196
+ R++A+LR LQL++
Sbjct: 63 MDSKSREIAQLRKDKLQLER 82
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 122 KELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPRRG 181
K L+ + HEEQ+S K A +S + + + + ++ + +++ L D
Sbjct: 1452 KLLQSEVQGHEEQVSTLKKAEDQSKAQVKEKEEKSKKVLIQAREKIQQLTALKDKLSAEN 1511
Query: 182 RDVARLRSIVLQLKQAGSR 200
D+ ++ + K++ S+
Sbjct: 1512 EDLRKMAKAASEAKESLSQ 1530
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 82 KQEREEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAA 141
K + + +K K+ ++++ ++ +KE ++ K EE+ +
Sbjct: 44 KNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEKIEETEKEKDEEEKIEEEEKEGGEEE 103
Query: 142 NRESAKN-AERAQARGSESSVEEGNE 166
N E + E + + E VEEGNE
Sbjct: 104 NEEEEEEETEEEEEKEEEYEVEEGNE 129
>SB_20042| Best HMM Match : RYDR_ITPR (HMM E-Value=0)
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 121 KKELEDWYKSHEEQISKTKAANRESAKNAERAQAR-GSESSVE 162
KKE D E + KAA +++AK+ E+ + R SE S+E
Sbjct: 123 KKETADGDNDKEALDKQDKAAQQDAAKDTEKFRTRISSEGSME 165
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGN 165
+Q+ KK+L D + +E+ ++ K ++A AER + E S++ N
Sbjct: 160 MQVVKKKLNDSERLLQEKDAENKRKEMDAALEAERTRGTIEELSLQLKN 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,541,143
Number of Sequences: 59808
Number of extensions: 237947
Number of successful extensions: 731
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 41
length of query: 210
length of database: 16,821,457
effective HSP length: 79
effective length of query: 131
effective length of database: 12,096,625
effective search space: 1584657875
effective search space used: 1584657875
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 58 (27.5 bits)
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