Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001060-TA|BGIBMGA001060-PA|IPR000996|Clathrin light
chain
(210 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 62 3e-10
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 37 0.012
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 37 0.012
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 34 0.065
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 34 0.065
AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical... 34 0.065
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 33 0.20
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 33 0.20
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 33 0.20
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 33 0.20
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 32 0.26
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 1.1
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 30 1.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 1.1
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81491-14|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 28 4.3
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 4.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 4.3
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 4.3
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 28 5.7
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 5.7
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 28 5.7
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 5.7
AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical ... 28 5.7
Z69634-4|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 27 7.5
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 27 7.5
AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 7.5
AL117195-14|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 27 9.9
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 9.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 9.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 9.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 9.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 9.9
AC025715-3|AAU87815.1| 534|Caenorhabditis elegans Hypothetical ... 27 9.9
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 62.1 bits (144), Expect = 3e-10
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 14 DPAADFLAREQNQLAGLE-----------DELETSAPPPAISTSTNGF----DDFVEV-- 56
DP ADFLAREQN A + D E AP PA+ D+ V
Sbjct: 3 DPVADFLAREQNLFADFDGAPPAAAAANPDAPEADAPAPALDDDFGDLQIAGDEPPPVVH 62
Query: 57 PSASAFDANGLLDD---APL-------------------GST-PTTVFKQ-EREEPEKIK 92
P+ S D +GL+DD AP GS P+ + R E EKI+
Sbjct: 63 PTDSGVDLDGLVDDNAAAPAIVVPAVEPMVNGNHSASSGGSKGPSPILSTVPRIEAEKIR 122
Query: 93 IWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAANRESAKNAERA 152
+W+ +Q + AKKELE+WYK E+ + + N ++ K+ +
Sbjct: 123 LWKAQQEQLLSKKDEAEEKKKIELRANAKKELEEWYKQREKTLQLSHDENLKNEKSNQEL 182
Query: 153 QARGSESSVEEGNEWARVSELCD-FGPRRGRDVARLRSIVLQLKQAG 198
A+ + +W V++L D + G+D++RL++++ LK AG
Sbjct: 183 FAKQQDGDA----QWETVNKLVDQQKSKSGKDLSRLKTLLAGLKHAG 225
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 23 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 72
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 23 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 72
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 34.3 bits (75), Expect = 0.065
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNE 166
L+ AKK D K EE +K+K + ES K E + + E +V+ +E
Sbjct: 13083 LEAAKKSAADKLKLEEESAAKSKKVSEESVKFGEEKKTKAGEKTVQVESE 13132
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 34.3 bits (75), Expect = 0.065
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNE 166
L+ AKK D K EE +K+K + ES K E + + E +V+ +E
Sbjct: 13083 LEAAKKSAADKLKLEEESAAKSKKVSEESVKFGEEKKTKAGEKTVQVESE 13132
>AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 34.3 bits (75), Expect = 0.065
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAKNA-ERAQARGSESSVEEGNEWARVSELCD 175
L+ A + ++W K HEE I ++K K A +RA+A E+ +++ S +
Sbjct: 1313 LKKALADCDEWKKKHEESIVESKTEILMERKRAMDRAEACEKETELKQSRMATIESARME 1372
Query: 176 FGPRRGR---DVARLRSIVLQLKQ 196
G R ++ R R I++QL++
Sbjct: 1373 LGGELARTQSELDRCRQIIIQLEE 1396
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 24 QNQLAGLEDELETSAPPPAISTSTNGFDDFVEVP-SASAFDANGLLDDAPLGSTPTTVFK 82
Q++LA L+ S P S S +V++P +AS+ N D+ PL S+P+ F
Sbjct: 1246 QSKLANLQKSAVESLQNPMSSNSRQNRSIYVDIPRAASSIGLNENSDEVPLRSSPSVRFA 1305
Query: 83 QEREEPEK 90
+ ++
Sbjct: 1306 DSSQNMQR 1313
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 24 QNQLAGLEDELETSAPPPAISTSTNGFDDFVEVP-SASAFDANGLLDDAPLGSTPTTVFK 82
Q++LA L+ S P S S +V++P +AS+ N D+ PL S+P+ F
Sbjct: 1246 QSKLANLQKSAVESLQNPMSSNSRQNRSIYVDIPRAASSIGLNENSDEVPLRSSPSVRFA 1305
Query: 83 QEREEPEK 90
+ ++
Sbjct: 1306 DSSQNMQR 1313
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 24 QNQLAGLEDELETSAPPPAISTSTNGFDDFVEVP-SASAFDANGLLDDAPLGSTPTTVFK 82
Q++LA L+ S P S S +V++P +AS+ N D+ PL S+P+ F
Sbjct: 1006 QSKLANLQKSAVESLQNPMSSNSRQNRSIYVDIPRAASSIGLNENSDEVPLRSSPSVRFA 1065
Query: 83 QEREEPEK 90
+ ++
Sbjct: 1066 DSSQNMQR 1073
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 24 QNQLAGLEDELETSAPPPAISTSTNGFDDFVEVP-SASAFDANGLLDDAPLGSTPTTVFK 82
Q++LA L+ S P S S +V++P +AS+ N D+ PL S+P+ F
Sbjct: 1246 QSKLANLQKSAVESLQNPMSSNSRQNRSIYVDIPRAASSIGLNENSDEVPLRSSPSVRFA 1305
Query: 83 QEREEPEK 90
+ ++
Sbjct: 1306 DSSQNMQR 1313
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 118 QIAKKELEDWYKSHEEQISKTKA--ANRESAKNAERAQARGSESSVEEGNE 166
++ KKE ++W K EE K KA +E K E + + +++ EE E
Sbjct: 534 EVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKTEGEEEKNEDAAGEEKTE 584
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 118 QIAKKELEDWYKSHEEQISKTKA--ANRESAKNAERAQARGSESSVEEGNE 166
++ KKE ++W K EE K KA +E K E + + +++ EE E
Sbjct: 550 EVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKTEGEEEKNEDAAGEEKTE 600
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 52
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 121 KKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWA-----RVSELCD 175
KK E+ K+ + ++ T A N + + + SE S + GN WA R+S
Sbjct: 590 KKSTENLPKTSKNRVPSTHATQLREELNRAKIELKKSEKSGKNGNFWAEDNKQRISSFLG 649
Query: 176 FGPRRGRDVARLRSIVLQLKQ 196
+ D+A LQ +Q
Sbjct: 650 ARSKTEEDIAMRTKQKLQQQQ 670
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 52
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 22 REQNQLAGLEDELE-TSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTT 79
R + G DE + APPP S+ G+D+ PSA A D AP G PT+
Sbjct: 80 RARRPARGAYDEGDYKEAPPPTSYPSSGGYDE----PSAPAHDT---APQAPAGPAPTS 131
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 129 KSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWA 168
++ +EQ ++AA ++ + A++ Q RGS ++ E+G + A
Sbjct: 347 QADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQA 386
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 129 KSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNE 166
++ +EQ ++AA ++ + A++ Q RGS S+ ++G +
Sbjct: 250 QADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQ 287
>Z81491-14|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 129 KSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWA 168
++ +EQ ++AA ++ + A++ Q RGS ++ E+G + A
Sbjct: 347 QADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQA 386
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 129 KSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNE 166
++ +EQ ++AA ++ + A++ Q RGS S+ ++G +
Sbjct: 250 QADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQ 287
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 23 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 71
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 606 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 23 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 71
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 1669 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 1712
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 136 SKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPRRGRDVARLR 188
S KA+ S NAE + + SESS E + D G G +V R
Sbjct: 441 SSHKASESSSESNAESTEKQTSESSGNESDSEESEDSEVDVGEENGSEVKESR 493
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 122 KELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSEL--CDFGPR 179
+ +++ + H++++ + ++ RE+ + AER R S ++E ++ RV+ L D +
Sbjct: 109 RSIKETTREHDQKMKEMRSETREAQEKAER-NHREKMSKIKEDHDKERVAALQKIDAAKK 167
Query: 180 RGRDVARL 187
G ++ L
Sbjct: 168 EGAEMIAL 175
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 122 KELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSEL--CDFGPR 179
+ +++ + H++++ + ++ RE+ + AER R S ++E ++ RV+ L D +
Sbjct: 109 RSIKETTREHDQKMKEMRSETREAQEKAER-NHREKMSKIKEDHDKERVAALQKIDAAKK 167
Query: 180 RGRDVARL 187
G ++ L
Sbjct: 168 EGAEMIAL 175
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 122 KELEDWYKSHEEQISKTKAANR---ESAKNAERAQAR--GSESSVEEGNEWARVSELCD 175
+EL+ K HEE++ + K A R E+ + A + + ++ EGN R SE+ D
Sbjct: 781 EELDCVKKEHEERLMEEKHATRLALEAVRRAHEEELKNVAEKNKTGEGNHIGRQSEIFD 839
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 31 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQ-EREEP 88
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 89 EKIK 92
E ++
Sbjct: 1825 EPME 1828
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 122 KELEDWYKSHEEQISKTKAANR---ESAKNAERAQAR--GSESSVEEGNEWARVSELCD 175
+EL+ K HEE++ + K A R E+ + A + + ++ EGN R SE+ D
Sbjct: 781 EELDCVKKEHEERLMEEKHATRLALEAVRRAHEEELKNVAEKNKTGEGNHIGRQSEIFD 839
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 31 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQ-EREEP 88
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 89 EKIK 92
E ++
Sbjct: 1825 EPME 1828
>AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical
protein Y4C6A.1 protein.
Length = 448
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 117 LQIAKKELEDWYKSHEEQISKTKAANRESAK 147
+++ KK++ D +KSH SK K +E+ K
Sbjct: 416 MEMPKKKIADVFKSHRSSRSKRKKKEKEAPK 446
>Z69634-4|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 128 YKSHE-EQISKTKAANRESAKNAERAQARGSESSVEEG---NEWARVSELCDFGPRRGRD 183
Y SHE S A NR+ ++ Q+ S G E + E D+GP R ++
Sbjct: 397 YTSHEGHSTSSPTAENRQCHRSRSPEQSNFRPSQTVPGLSSMEQRKAHENVDWGPHRTKN 456
Query: 184 VARLRS 189
V +RS
Sbjct: 457 VPPIRS 462
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 122 KELEDW---YKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGP 178
+ L +W YK +E+ S+TK +R++A E +++ + +E V +L +
Sbjct: 191 ENLTEWAQAYKQKQEKSSETKRRSRKTAHREEEQKSKILTVPIGSLSEDQAVKQLKELTK 250
Query: 179 RRGRDVA 185
R RD A
Sbjct: 251 ERRRDDA 257
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 14 DPAADFLAREQNQLAGLE--DELETSAPPPAISTSTNGFDDFVEVPSASAFDA 64
D DF + +++ L DELE++ PP AI + F + + PS ++ D+
Sbjct: 358 DVLLDFFSNHKHECMKLTAWDELESAKPPLAIKILRDAFSN-TDSPSTTSMDS 409
>AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 121 KKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSE 172
KKE E+ K+ EE++ K N+E K AE + + E V+ E + E
Sbjct: 899 KKE-EERLKAEEEKVKVEKERNKEKVK-AEEERLKAEEEKVKIEKEKVKAEE 948
>AL117195-14|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18 protein.
Length = 1456
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 120 AKKELEDWYKSHEEQISKTKAANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPR 179
A+KELED + E+ KA + ER AR +E V E N+W E +F R
Sbjct: 1022 ARKELEDVTRQKEKFEKDKKAVGGQLTSMTER--ARAAEVCVME-NKWTAALE--EFKKR 1076
Query: 180 R 180
R
Sbjct: 1077 R 1077
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 22 REQNQLAGLEDELETSAP--PPAISTSTNGFDDFVEVPSASAFDANGLLDD 70
++ Q+ G+E E + PP + +D + P + FD +G +DD
Sbjct: 36 QQNQQIQGIEQTGEPNGDNQPPQLVIDQLSYDQQQQQPKQNCFDTHGNMDD 86
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 392 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 450
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 606 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 664
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 742 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 800
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 783 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 841
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 794 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 852
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 11 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 69
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 795 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 853
>AC025715-3|AAU87815.1| 534|Caenorhabditis elegans Hypothetical
protein Y38F2AR.5 protein.
Length = 534
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 141 ANRESAKNAERAQARGSESSVEEGNEWARVSELCDFGPRRGRDVARLRSI 190
+NR + K A + + SV+ + ARVS C F P+ + +R++
Sbjct: 362 SNRNTQKTARQIPKKRKLDSVDIVSSSARVSVRCRFTPKERDQLIMIRAV 411
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,933,191
Number of Sequences: 27539
Number of extensions: 193077
Number of successful extensions: 736
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 71
length of query: 210
length of database: 12,573,161
effective HSP length: 78
effective length of query: 132
effective length of database: 10,425,119
effective search space: 1376115708
effective search space used: 1376115708
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
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