Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001059-TA|BGIBMGA001059-PA|undefined
(394 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17682| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 2e-24
SB_18134| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_23844| Best HMM Match : RRM_2 (HMM E-Value=4.8) 40 0.003
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10) 39 0.008
SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.008
SB_15647| Best HMM Match : LRR_1 (HMM E-Value=2.5e-20) 38 0.019
SB_12936| Best HMM Match : LRR_1 (HMM E-Value=0.00017) 38 0.019
SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11) 38 0.019
SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044) 37 0.025
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 37 0.033
SB_47455| Best HMM Match : NACHT (HMM E-Value=4.3e-05) 37 0.033
SB_24157| Best HMM Match : Tropomodulin (HMM E-Value=0.49) 37 0.033
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.057
SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09) 36 0.057
SB_23841| Best HMM Match : LRR_1 (HMM E-Value=1e-09) 34 0.23
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 33 0.30
SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07) 33 0.30
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_21072| Best HMM Match : DUF417 (HMM E-Value=1.3) 33 0.40
SB_42306| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=1.4) 32 0.70
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 32 0.70
SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09) 32 0.70
SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14) 32 0.92
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 32 0.92
SB_4198| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 31 2.1
SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18) 30 2.8
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 30 2.8
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_40326| Best HMM Match : PhoU (HMM E-Value=2.9) 30 3.7
SB_53082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17) 29 4.9
SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065) 29 6.5
SB_50400| Best HMM Match : Tropomodulin (HMM E-Value=0.17) 29 8.6
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08) 29 8.6
SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37) 29 8.6
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 8.6
>SB_17682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 110 bits (265), Expect = 2e-24
Identities = 52/112 (46%), Positives = 74/112 (66%)
Query: 3 GASYIAELVKYQKIHRYSENWIHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEV 62
GA IA+++++Q R+S W +LRYR PD+D M GLRRI+LC N + D G++ L E
Sbjct: 110 GAEEIAKIIRFQATRRHSVAWQDSLRYRRPDMDRMTGLRRISLCKNPLVSDRGMSYLAEA 169
Query: 63 LADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEISIESLS 114
L DDLW+KALD+Q CG++ A +++ NTT+ VLDLR N I + L+
Sbjct: 170 LKDDLWVKALDLQQCGVSTEGAMEFQPVLKFNTTITVLDLRLNPLIDRDVLT 221
>SB_18134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 74.1 bits (174), Expect = 2e-13
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 7 IAELVKYQKIHRYSENWIHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADD 66
+A L K+Q R+S W +LRYR PD+D M GLRRI+LC N + D G++ L E L DD
Sbjct: 28 LACLAKFQATRRHSVAWQDSLRYRRPDMDRMTGLRRISLCKNPLVSDRGMSYLAEALKDD 87
Query: 67 LWIK 70
LW+K
Sbjct: 88 LWVK 91
>SB_23844| Best HMM Match : RRM_2 (HMM E-Value=4.8)
Length = 190
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
G LGDAG+ + E L + ++ L ++ +T A M+R NTT+ +L L H +
Sbjct: 76 GGKYLGDAGVASIAEALKVNTTVRKLGIKGNNMTPEAGRALGEMLRHNTTITLLSLFHGN 135
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 43 ITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
+ G LGDAG+ + + L + ++ L ++ +T A M+R NTT+ +L L
Sbjct: 541 VVYIGGKYLGDAGVASIAKALKVNTTVRKLGIKGRNMTPEAGRALGEMLRHNTTITLLSL 600
Query: 103 RHNS 106
H +
Sbjct: 601 FHGN 604
>SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10)
Length = 1037
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRH 104
G LGDAG+ + E L + ++ L ++ +T A M R NTT+ L L H
Sbjct: 706 GGEYLGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFH 763
>SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 24 IHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEAT 83
I LR L T A ++ + L GN + + + L +L+D++++ L++ CG+
Sbjct: 113 IEGLRCLSTMLTTNACIKSLDLSGNP-VNKSSIACLGRMLSDNIFLYDLNLSTCGIQGKN 171
Query: 84 ATATLNMMRSNTTLVVLDLRHN 105
A A L +R +T++ L+L +N
Sbjct: 172 AVALLEALRYHTSIKTLNLSYN 193
>SB_15647| Best HMM Match : LRR_1 (HMM E-Value=2.5e-20)
Length = 293
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L ++ L GN ++GD G + + L + ++ LD++ + + A A N +++
Sbjct: 56 LMTNSTLEKLDLEGN-KIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIANALKT 114
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 115 NSTLEKLDLEGN 126
Score = 37.1 bits (82), Expect = 0.025
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L ++ L GN ++GD G+ + + L + +K LD++ + + A A + +
Sbjct: 112 LKTNSTLEKLDLEGN-KIGDEGVIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMT 170
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 171 NSTLKKLDLEGN 182
Score = 37.1 bits (82), Expect = 0.025
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L+++ L GN ++GD G + + L + +K LD++ + + A A + +
Sbjct: 140 LMTNSTLKKLDLEGN-KIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMT 198
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 199 NSTLEKLDLERN 210
Score = 36.7 bits (81), Expect = 0.033
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 36 TMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNT 95
T + L ++ L GN ++GD G + + L + +K L +Q + + A A N + +N+
Sbjct: 2 TNSTLEKLDLEGN-KIGDEGAIAIAKALMTNSTLKKLGLQGNNIGDEGAKAIANALMTNS 60
Query: 96 TLVVLDLRHN 105
TL LDL N
Sbjct: 61 TLEKLDLEGN 70
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L+++ L GN ++GD G + + L + ++ LD++ + + A A + +
Sbjct: 168 LMTNSTLKKLDLEGN-KIGDEGAIAIAKALMTNSTLEKLDLERNKIGDEGAIAIAKALMT 226
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 227 NSTLEKLDLEGN 238
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L+++ L GN +GD G + L + ++ LD++ + + A A + +
Sbjct: 28 LMTNSTLKKLGLQGNN-IGDEGAKAIANALMTNSTLEKLDLEGNKIGDEGAIAIAKALMT 86
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 87 NSTLEKLDLEGN 98
Score = 33.5 bits (73), Expect = 0.30
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L ++ L GN ++GD G + L + +K LD++ + + A A + +
Sbjct: 224 LMTNSTLEKLDLEGN-KIGDEGAIAIANALMTNSTLKKLDLEGNKIGDEGAIAIAKALMT 282
Query: 94 NTTLVVLDL 102
N+TL LDL
Sbjct: 283 NSTLKKLDL 291
Score = 33.1 bits (72), Expect = 0.40
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L ++ L N ++GD G + + L + ++ LD++ + + A A N + +
Sbjct: 196 LMTNSTLEKLDLERN-KIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIANALMT 254
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 255 NSTLKKLDLEGN 266
Score = 31.9 bits (69), Expect = 0.92
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L ++ L GN ++GD G + L + ++ LD++ + + A + +
Sbjct: 84 LMTNSTLEKLDLEGN-KIGDEGAIAIANALKTNSTLEKLDLEGNKIGDEGVIAIAKALMT 142
Query: 94 NTTLVVLDLRHN 105
N+TL LDL N
Sbjct: 143 NSTLKKLDLEGN 154
>SB_12936| Best HMM Match : LRR_1 (HMM E-Value=0.00017)
Length = 472
Score = 37.5 bits (83), Expect = 0.019
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + LR+++L N +GD G + L + ++ LD++ + + A A N +++
Sbjct: 287 LKTKSVLRKLSLYSNN-IGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKT 345
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSN-DGRIKTVVKNGAVKDRGTITKNAPS 152
N+TL L+L+ N+ ++S + L S N + ++ + GA+ + N+
Sbjct: 346 NSTLENLNLQENNIGDEGTISMANALKTNSTLENLNLQVNNIGDEGAISMANALKTNSTL 405
Query: 153 KYL 155
+ L
Sbjct: 406 RSL 408
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L + L N +GD G + L + ++ L++Q + + A + N +++
Sbjct: 343 LKTNSTLENLNLQENN-IGDEGTISMANALKTNSTLENLNLQVNNIGDEGAISMANALKT 401
Query: 94 NTTLVVLDL--RHNSEI 108
N+TL LDL R N E+
Sbjct: 402 NSTLRSLDLPYRRNQEM 418
>SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11)
Length = 768
Score = 37.5 bits (83), Expect = 0.019
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 49 TQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRH 104
T+ GDAG+ + E L ++ L ++ +T A M+R NTT+ L L H
Sbjct: 370 TETGDAGVASIAEALKVKTTVRKLGIKGRNMTPEAGRALGEMLRHNTTITFLSLFH 425
>SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)
Length = 899
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + L+++ LC N +GD G + L + +K L+ CG+ A A +M+
Sbjct: 809 LMTNSTLKKLHLCENN-IGDEGAIAIANALMTNSTLKKLNFNTCGIRAVGAAALADMLYY 867
Query: 94 NTTLVV 99
NT L V
Sbjct: 868 NTELKV 873
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/57 (22%), Positives = 31/57 (54%)
Query: 50 QLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
++ G + E+L+ + W++ + + + A + N +++N+TL +LDL N+
Sbjct: 740 KISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKILDLTKNN 796
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 50 QLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
Q+GD G + L + +K LD+ + A A N + +N+TL L L N+
Sbjct: 768 QIGDEGAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENN 824
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 36.7 bits (81), Expect = 0.033
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LGDAG+ + E L + ++ L ++ +T A M+R NTT+ +L L
Sbjct: 842 LGDAGVASIAEALKVNTTVRTLGIKGRNMTPEAGRALGEMLRHNTTITLLSL 893
>SB_47455| Best HMM Match : NACHT (HMM E-Value=4.3e-05)
Length = 899
Score = 36.7 bits (81), Expect = 0.033
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L T + LR+++L N +GD G + L + ++ LD++ + + A A N +++
Sbjct: 823 LKTKSVLRKLSLYSNN-IGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKT 881
Query: 94 NTTLVVLDLRHNS 106
N+TL L+L+ N+
Sbjct: 882 NSTLENLNLQENN 894
>SB_24157| Best HMM Match : Tropomodulin (HMM E-Value=0.49)
Length = 502
Score = 36.7 bits (81), Expect = 0.033
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
L+ L + + G LGDAG+ + + L + ++AL ++ +T A M R
Sbjct: 326 LEDSTSLSDVLISGE-YLGDAGVASIAKALKVNTTVRALGIKGDNMTPEAGRALGEMFRH 384
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITKNAPSK 153
NTT+ L L + +L S L + + + V + +NA
Sbjct: 385 NTTITCLSLASGNIGDSGALCIASGLSQNTTLEKIQIEDSCIGATGVSALAKVIQNATHL 444
Query: 154 YLAKSSVVKKE-KDYTEVLE 172
L+++ + KKE K +V+E
Sbjct: 445 DLSRNIIGKKEAKAIAKVIE 464
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 35.9 bits (79), Expect = 0.057
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LGDAG+ + E L + ++AL + +T A M++ NTT+ L L
Sbjct: 717 LGDAGVASIAEALMVNTTVRALGISGKNMTPEAGRALGEMLKHNTTITCLSL 768
>SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09)
Length = 771
Score = 35.9 bits (79), Expect = 0.057
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LGDAG+ + E L + ++AL + +T A M++ NTT+ L L
Sbjct: 487 LGDAGVASIAEALIVNTTVRALGISGKNMTPEAGRALGEMLKHNTTITCLSL 538
>SB_23841| Best HMM Match : LRR_1 (HMM E-Value=1e-09)
Length = 391
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 37 MAGLRRITL-CGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNT 95
M + +TL N + + G + ++L ++ +I LD+ N L A A M+R N+
Sbjct: 111 MQNTKVLTLNISNNDIQEEGAIYISKMLTENFYITELDISNNNLQSQGAYAVSEMLRQNS 170
Query: 96 TLVVLDLRHNSEI 108
++ ++L N I
Sbjct: 171 EILEVNLSENKFI 183
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 32 PDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMM 91
P LD GL + L N Q+ G + L + +K+LD+ G + A + +
Sbjct: 220 PALDANVGLEYLNLRWN-QIRRKGAVAIGYGLRHNCSLKSLDLSWNGFADDGAKSVGEAL 278
Query: 92 RSNTTLVVLDLRHNSEISIESLS 114
NTTL LD+ N IS E S
Sbjct: 279 ALNTTLTELDISSN-RISGEGAS 300
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 55 GLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
G + + + ++ I+ LD+ G + A A N +R N+TL LDL HN
Sbjct: 263 GAIAICKAMGENASIRVLDLSWNGFADDGAAAMGNALRHNSTLKELDLSHN 313
>SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07)
Length = 218
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 50 QLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
+LG +G L ++L ++ + L++ N L++ A L + N L+ LDL HN
Sbjct: 81 KLGSSGCQALSDMLQYNVSLLKLNLSNNNLSDKDTVALLETFKGNEKLLWLDLSHN 136
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
G LGDAG+ + + L + ++ L + +T A M+R NTT+ L L
Sbjct: 1185 GGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALGEMLRHNTTITCLSL 1240
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 33.1 bits (72), Expect = 0.40
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 49 TQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLR 103
T LG G+T L L + ++ L + +T A M+R NTT+ L LR
Sbjct: 2056 TILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEMLRHNTTVTSLFLR 2110
>SB_21072| Best HMM Match : DUF417 (HMM E-Value=1.3)
Length = 248
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LGDAG+ + + L + ++AL + +T A M++ NTT+ L L
Sbjct: 169 LGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALGEMLKHNTTITCLSL 220
>SB_42306| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=1.4)
Length = 444
Score = 32.3 bits (70), Expect = 0.70
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
+T LG G+T L L + ++ L +++ +T + A M+R NTT+ L L
Sbjct: 189 STILGGTGVTSLANALKVNKTVRTLGIRSHNMTSEASRAIGEMLRHNTTVTSLFL 243
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 50 QLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEI 108
++G+A + L+E L +++ + A+ +++ G ++ A ++ NT+L D+R +S I
Sbjct: 135 EIGEANVGNLIESLKNNVTLSAICIESTGFGDSCAIKLAEILSDNTSLT--DVRIDSTI 191
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLR-HN 105
+T GD+ KL E+L+D+ + + + + L T+ N ++ N T+ L +R HN
Sbjct: 161 STGFGDSCAIKLAEILSDNTSLTDVRIDSTILGGTGVTSLANALKVNKTVRTLGIRSHN 219
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 32.3 bits (70), Expect = 0.70
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
N + G++ + L ++ I+ LD+ GLT+ A + + +N+TL L+L +N
Sbjct: 172 NNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYN 229
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 53 DAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEIS 109
D G L+E L + + L++ N LT+ N + NTTL L+L N ++
Sbjct: 289 DFGTEDLMEALKRNTSLIVLNLSNNRLTDRGILNIANGLNGNTTLEELNLNRNPALN 345
>SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09)
Length = 539
Score = 32.3 bits (70), Expect = 0.70
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 39 GLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLV 98
GL + L N AG+ + + L + ++ LD+ N GL + A + +R N+TLV
Sbjct: 292 GLEVLKLQWNGLRSKAGVA-IGQSLRKNTTLRVLDLSNNGLDDTVARSLGESLRVNSTLV 350
Query: 99 VLDLRHN 105
LD +N
Sbjct: 351 ELDFSNN 357
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 63 LADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
LA + ++ L +Q GL A +R NTTL VLDL +N
Sbjct: 287 LAVNKGLEVLKLQWNGLRSKAGVAIGQSLRKNTTLRVLDLSNN 329
>SB_55736| Best HMM Match : NACHT (HMM E-Value=3.2e-14)
Length = 696
Score = 31.9 bits (69), Expect = 0.92
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
G+ LGDA + L L + ++ L +++ +T A M+R NTT+ L L
Sbjct: 584 GSIILGDASIKSLANALKVNTTVRTLAIRSGNMTSEAGRAIGEMLRHNTTVTSLFL 639
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 31.9 bits (69), Expect = 0.92
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
NT LG+ G + + L + +K LD+ L +A +A ++ N +L +L+L NS
Sbjct: 231 NTCLGNEGARLVAKGLVKNTCVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNS 289
>SB_4198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1001
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 39 GLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGL 79
GL +TLC + +GD G L VLA++ +K L + +CG+
Sbjct: 799 GLHELTLC--SVIGDEGAIMLASVLANNGTLKYLALPSCGI 837
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 29 YRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATL 88
Y P +D GL + L N L G + L + ++ LD+ G + A A
Sbjct: 406 YLGPAIDANDGLEYLNLSWN-HLRGPGAIAFAKGLRANCSLQVLDLSWNGFADEGAHAVG 464
Query: 89 NMMRSNTTLVVLDLRHN 105
++ N TL+ LDL +N
Sbjct: 465 ESLKDNNTLLELDLSYN 481
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
LG +G ++ L ++ I +L++++CG+ +++ N + LD+ N
Sbjct: 287 LGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKENCYITELDVAQN 341
Score = 28.7 bits (61), Expect = 8.6
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 63 LADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLR 103
+ + + KA+D+++ GL + A A + + +NTT+ L++R
Sbjct: 271 IMEHITTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIR 311
>SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)
Length = 182
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 67 LWI--KALDVQNCGLTEATATATLNMMRSNTTLVVLD-LRHNSEISIESLSKY 116
LW + L+V NC L EAT +N +R +V L LR S+ E +Y
Sbjct: 71 LWAGDQILEVNNCDLREATHDMAINALRQTPAIVRLRVLRDESQYKDEDAFEY 123
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 123 SGCSNDGRIKTVVKNGAVKDRGTIT-KNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEISH 181
+ ++D + V NG V G KNA S +L S V+ ++Y + E + + S
Sbjct: 1193 TSANSDRSVGKVFGNGGVHTHGLPKGKNALSTFLTARSHVRTNREYATIRESETESSYSR 1252
Query: 182 RQQLE 186
+ L+
Sbjct: 1253 KSVLD 1257
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 34 LDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRS 93
+D R+ TLCG + G++ T L L D+W+ NC L TLN
Sbjct: 4249 MDLPEDTRKCTLCGASGDGESEGTSRLLNLEVDVWVHL----NCALWSLEVYETLNGALM 4304
Query: 94 NTTLVV 99
N L V
Sbjct: 4305 NVMLAV 4310
>SB_40326| Best HMM Match : PhoU (HMM E-Value=2.9)
Length = 672
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 58 KLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
++ E+L+ + ++ L V G+++ A+A +M+ N+ + VLDLR N
Sbjct: 599 EIAEILSKNGVLRELVVHFKGISDKGASAFADMLSYNSVIEVLDLRSN 646
>SB_53082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 53 DAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
D G + + D+ + L++ + G+T A M++ N L LDL N
Sbjct: 88 DNGAQAIAMTMCSDITVATLNLHDNGITSPGAICLAKMLKGNCFLTCLDLSAN 140
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
G LGDAG+ + E L + I+ L + +T A M+R N T+ L H +
Sbjct: 934 GGGILGDAGVQHIAEALKFNTTIRTLAINPRRVTPDAGQALGEMLRHNNTITRLTSIHGN 993
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
G LGDAG+ + E L + I+ L + +T A M+R N T+ L H+
Sbjct: 2246 GGEILGDAGVQYIAEALKFNTTIRTLAINPGRVTPDAGQAFGEMLRHNNTITRLTSIHS 2304
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 51 LGDAGLTKLLEVLADDLW-IKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS--E 107
+G AGL + +L D+ +K L + CG+ A + + NT+L L L N+ +
Sbjct: 1047 IGLAGLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALSKNTSLEKLSLACNNIDD 1106
Query: 108 ISIESLSKY 116
+ +L+KY
Sbjct: 1107 EGMCALAKY 1115
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 40 LRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVV 99
L+R+ L NT+L G+ L EV+AD + LD++ A ++ N +LV
Sbjct: 316 LQRVGLL-NTRLSSEGIIALAEVVADSKTLLRLDLRENDPYVGGLMALALSLKVNNSLVR 374
Query: 100 LDL 102
+DL
Sbjct: 375 IDL 377
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEI 108
+G+A + L+E L +++ + A+ +++ G ++ A ++ NT+L D+R +S I
Sbjct: 731 IGEANVGNLIESLNNNVTLSAICIESTGFGDSCAIKLAEILSDNTSLT--DVRIDSTI 786
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLR-HN 105
+T GD+ KL E+L+D+ + + + + L T+ N ++ N T+ L +R HN
Sbjct: 756 STGFGDSCAIKLAEILSDNTSLTDVRIDSTILGGTGVTSLANALKVNKTVRTLGIRSHN 814
>SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17)
Length = 735
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 40 LRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVV 99
++ + L NT G+ + L ++ LD+ NCG+ A ++R+N L V
Sbjct: 494 IQELDLSWNT-FQSRGVIAVQWFLTHSTSLQTLDISNCGIHLDGAEVIAKVLRANRNLQV 552
Query: 100 LDLRHN 105
L L N
Sbjct: 553 LKLGRN 558
>SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065)
Length = 879
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 50 QLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEIS 109
Q+GD G + L + +K LD++ + + A A + +N+TL L L + S I
Sbjct: 753 QIGDEGAIAIANALMTNSTLKKLDLEGKNIGDEGAKAIAEALMTNSTLKELHL-YESNIG 811
Query: 110 IE 111
E
Sbjct: 812 DE 813
>SB_50400| Best HMM Match : Tropomodulin (HMM E-Value=0.17)
Length = 641
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LG G+T L L + ++ L + +T A M++ NTT+ L L
Sbjct: 365 LGGTGVTSLANALKVNKTVRTLKIDGGNMTSEAGRAIGEMLKHNTTVTSLFL 416
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 40 LRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVV 99
+ I L N + GL ++L + ++ L +++ LT+ A A ++ N TL+
Sbjct: 354 ITEIDLSMNFIRSEGGLA-FAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLIH 412
Query: 100 LDLRHN 105
LDL HN
Sbjct: 413 LDLSHN 418
>SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08)
Length = 833
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 48 NTQLGDAGLTKLL-EVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLD 101
N +GD G L +V+A + +L V NCGL++ L M + L+ ++
Sbjct: 664 NNSIGDQGAYSLAYDVIAHSQNLHSLKVSNCGLSKYGMHCLLTAMSDSVILLSME 718
>SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37)
Length = 320
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LG G+ +L L + ++ L + +T A M+R NTT+ L L
Sbjct: 37 LGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAIGEMLRHNTTVTSLFL 88
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 51 LGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDL 102
LG G+T L L + ++ L + +T A M++ NTT+ L L
Sbjct: 881 LGGTGVTSLANALKVNKTVRTLKIDGGNMTSEAGRAIGEMLKHNTTVTSLFL 932
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 28.7 bits (61), Expect = 8.6
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 127 NDGRIKTVVKNGAVKDRGT---ITKNAPSKYLAKSSVVKKEKDYTEVLEE-QLQE--EIS 180
+D + +K+ ++D GT I N K ++ + KE+DY + EE Q E EI
Sbjct: 1462 DDQKYSLTIKDLNLQDIGTYKCIASNEAGKVTQRAELEVKERDYAPIFEEKQFLEPLEIQ 1521
Query: 181 HRQQLE 186
RQ +E
Sbjct: 1522 VRQPVE 1527
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,319,675
Number of Sequences: 59808
Number of extensions: 338656
Number of successful extensions: 1163
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1067
Number of HSP's gapped (non-prelim): 106
length of query: 394
length of database: 16,821,457
effective HSP length: 84
effective length of query: 310
effective length of database: 11,797,585
effective search space: 3657251350
effective search space used: 3657251350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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