Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001059-TA|BGIBMGA001059-PA|undefined
(394 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113304-1|AAM29309.1| 818|Drosophila melanogaster AT27185p pro... 111 2e-24
AE014297-1878|AAF55081.2| 818|Drosophila melanogaster CG7886-PA... 111 2e-24
AE014297-2382|AAF55447.1| 443|Drosophila melanogaster CG14325-P... 33 0.68
L35601-1|AAC37208.1| 1549|Drosophila melanogaster ankyrin protein. 31 2.1
AE014135-20|AAN06551.1| 1549|Drosophila melanogaster CG1651-PD, ... 31 2.1
AE014135-19|AAG22123.1| 1549|Drosophila melanogaster CG1651-PC, ... 31 2.1
AE014135-18|AAF59369.2| 1549|Drosophila melanogaster CG1651-PB, ... 31 2.1
AE014135-17|AAN06550.1| 1549|Drosophila melanogaster CG1651-PA, ... 31 2.1
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 31 3.7
AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-P... 30 4.8
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 29 8.4
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 29 8.4
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 29 8.4
>AY113304-1|AAM29309.1| 818|Drosophila melanogaster AT27185p
protein.
Length = 818
Score = 111 bits (267), Expect = 2e-24
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 3 GASYIAELVKYQKIHRYSENWIHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEV 62
GA ++A+++K QKI R++E W +LRYR D++T+ GLR + L N ++GD G+ + EV
Sbjct: 223 GAEHVADMLKMQKITRFTEGWEKSLRYRSVDVNTIGGLRTVLLADNPEIGDVGIRWITEV 282
Query: 63 LADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEISIESLSKYSWLGNV 122
L +D WIK +D++ CGLT+ A L+ + NT + ++R+N IS + L + + +
Sbjct: 283 LKEDAWIKKIDMEGCGLTDIGANLILDCLELNTAITEFNVRNNEGIS-KFLQRS--IHDR 339
Query: 123 SGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEISHR 182
GC + + + V ++ KN K V + +T+ LEEQL E + R
Sbjct: 340 LGCLPEEKQEPEYDLSCVNGLQSLPKN-------KKVTVSQLLSHTKALEEQLSFERTLR 392
Query: 183 QQLEELN 189
++ E+LN
Sbjct: 393 KKAEKLN 399
>AE014297-1878|AAF55081.2| 818|Drosophila melanogaster CG7886-PA
protein.
Length = 818
Score = 111 bits (267), Expect = 2e-24
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 3 GASYIAELVKYQKIHRYSENWIHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTKLLEV 62
GA ++A+++K QKI R++E W +LRYR D++T+ GLR + L N ++GD G+ + EV
Sbjct: 223 GAEHVADMLKMQKITRFTEGWEKSLRYRSVDVNTIGGLRTVLLADNPEIGDVGIRWITEV 282
Query: 63 LADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNSEISIESLSKYSWLGNV 122
L +D WIK +D++ CGLT+ A L+ + NT + ++R+N IS + L + + +
Sbjct: 283 LKEDAWIKKIDMEGCGLTDIGANLILDCLELNTAITEFNVRNNEGIS-KFLQRS--IHDR 339
Query: 123 SGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEISHR 182
GC + + + V ++ KN K V + +T+ LEEQL E + R
Sbjct: 340 LGCLPEEKQEPEYDLSCVNGLQSLPKN-------KKVTVSQLLSHTKALEEQLSFERTLR 392
Query: 183 QQLEELN 189
++ E+LN
Sbjct: 393 KKAEKLN 399
>AE014297-2382|AAF55447.1| 443|Drosophila melanogaster CG14325-PA
protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.68
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 52 GDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
G A + L+V+ IK LD+ CG+TE + ++ +T+L+ +DL +NS
Sbjct: 326 GAAAIFNTLQVMP----IKELDLGTCGITETITKLFMMLICQHTSLLEIDLSNNS 376
>L35601-1|AAC37208.1| 1549|Drosophila melanogaster ankyrin protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITK 148
N +++L L+H +EI+ +S KYS L + + ++ +++NGA + +TK
Sbjct: 509 NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGA--ENNAVTK 561
>AE014135-20|AAN06551.1| 1549|Drosophila melanogaster CG1651-PD,
isoform D protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITK 148
N +++L L+H +EI+ +S KYS L + + ++ +++NGA + +TK
Sbjct: 509 NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGA--ENNAVTK 561
>AE014135-19|AAG22123.1| 1549|Drosophila melanogaster CG1651-PC,
isoform C protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITK 148
N +++L L+H +EI+ +S KYS L + + ++ +++NGA + +TK
Sbjct: 509 NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGA--ENNAVTK 561
>AE014135-18|AAF59369.2| 1549|Drosophila melanogaster CG1651-PB,
isoform B protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITK 148
N +++L L+H +EI+ +S KYS L + + ++ +++NGA + +TK
Sbjct: 509 NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGA--ENNAVTK 561
>AE014135-17|AAN06550.1| 1549|Drosophila melanogaster CG1651-PA,
isoform A protein.
Length = 1549
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 94 NTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITK 148
N +++L L+H +EI+ +S KYS L + + ++ +++NGA + +TK
Sbjct: 509 NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGA--ENNAVTK 561
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 30.7 bits (66), Expect = 3.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 130 RIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEISHRQQLEE 187
+ K VKN ++ ++ PSK VVK +K + + Q EE H QQ E+
Sbjct: 157 KTKKAVKNKTQANKAEDDQDNPSKEDKPKKVVKNKKQTNKDGKPQTNEEYDHHQQHEK 214
>AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-PA
protein.
Length = 1037
Score = 30.3 bits (65), Expect = 4.8
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 76 NCGLTEATATATLNMMRSNTTLVVLDLR---HNSEISIESLSKYSWLGNVSGCSNDGRIK 132
NCGL+ A N R N V +LR H++ +++E+ ++ + GN G SN+
Sbjct: 50 NCGLSGHLACEARNS-RDNVAAVHDELRQQCHSAIVAVEARARAEYTGNNKGDSNNNSSS 108
Query: 133 TVVKNGA 139
+ N A
Sbjct: 109 SSTSNKA 115
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 120 GNVSGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEI 179
G+ S S+ + + + +G + + A S +A + KE+ + QLQ++
Sbjct: 270 GSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAH---LNKEQQQQPLPTTQLQQQQ 326
Query: 180 SHRQQLE 186
H+QQL+
Sbjct: 327 QHQQQLQ 333
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 120 GNVSGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEI 179
G+ S S+ + + + +G + + A S +A + KE+ + QLQ++
Sbjct: 270 GSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAH---LNKEQQQQPLPTTQLQQQQ 326
Query: 180 SHRQQLE 186
H+QQL+
Sbjct: 327 QHQQQLQ 333
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 120 GNVSGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQLQEEI 179
G+ S S+ + + + +G + + A S +A + KE+ + QLQ++
Sbjct: 266 GSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAH---LNKEQQQQPLPTTQLQQQQ 322
Query: 180 SHRQQLE 186
H+QQL+
Sbjct: 323 QHQQQLQ 329
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.313 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,048,195
Number of Sequences: 52641
Number of extensions: 510020
Number of successful extensions: 1448
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1433
Number of HSP's gapped (non-prelim): 17
length of query: 394
length of database: 24,830,863
effective HSP length: 86
effective length of query: 308
effective length of database: 20,303,737
effective search space: 6253550996
effective search space used: 6253550996
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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