Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001059-TA|BGIBMGA001059-PA|undefined
(394 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z82069-5|CAB04906.1| 740|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 29 7.5
Z19155-1|CAA79559.1| 397|Caenorhabditis elegans Hypothetical pr... 29 7.5
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 10.0
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
GN LG G+ +L LA + + L +QN G+ A + N L+ +D+R N
Sbjct: 386 GNNNLGVEGIARLKPALASNSHLHRLGLQNTGINCEGAIILAECIADNIALLRVDIRDN 444
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
NTQ+ L L+ L ++ ++ L + + GL + ++ SN++L +LDLR+NS
Sbjct: 270 NTQMSGKNLLVLICALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNS 328
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 32 PDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMM 91
P L + + L R+ L NT + G L E +AD++ + +D+++ + A A + M
Sbjct: 400 PALASNSHLHRLGL-QNTGINCEGAIILAECIADNIALLRVDIRDNPIALAGLLALHSAM 458
Query: 92 RSNTTLVVLDL 102
+ NT++ +L++
Sbjct: 459 KMNTSITLLNI 469
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
GN LG G+ +L LA + + L +QN G+ A + N L+ +D+R N
Sbjct: 386 GNNNLGVEGIARLKPALASNSHLHRLGLQNTGINCEGAIILAECIADNIALLRVDIRDN 444
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
NTQ+ L L+ L ++ ++ L + + GL + ++ SN++L +LDLR+NS
Sbjct: 270 NTQMSGKNLLVLICALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNS 328
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 32 PDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMM 91
P L + + L R+ L NT + G L E +AD++ + +D+++ + A A + M
Sbjct: 400 PALASNSHLHRLGL-QNTGINCEGAIILAECIADNIALLRVDIRDNPIALAGLLALHSAM 458
Query: 92 RSNTTLVVLDLRHNS-EISIESLSKY 116
+ NT++ +L++ + ++S E + +Y
Sbjct: 459 KMNTSITLLNIDASCVKLSSEKVREY 484
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
GN LG G+ +L LA + + L +QN G+ A + N L+ +D+R N
Sbjct: 386 GNNNLGVEGIARLKPALASNSHLHRLGLQNTGINCEGAIILAECIADNIALLRVDIRDN 444
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
NTQ+ L L+ L ++ ++ L + + GL + ++ SN++L +LDLR+NS
Sbjct: 270 NTQMSGKNLLVLICALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNS 328
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 32 PDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMM 91
P L + + L R+ L NT + G L E +AD++ + +D+++ + A A + M
Sbjct: 400 PALASNSHLHRLGL-QNTGINCEGAIILAECIADNIALLRVDIRDNPIALAGLLALHSAM 458
Query: 92 RSNTTLVVLDL 102
+ NT++ +L++
Sbjct: 459 KMNTSITLLNI 469
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 47 GNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHN 105
GN LG G+ +L LA + + L +QN G+ A + N L+ +D+R N
Sbjct: 386 GNNNLGVEGIARLKPALASNSHLHRLGLQNTGINCEGAIILAECIADNIALLRVDIRDN 444
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 48 NTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMMRSNTTLVVLDLRHNS 106
NTQ+ L L+ L ++ ++ L + + GL + ++ SN++L +LDLR+NS
Sbjct: 270 NTQMSGKNLLVLICALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNS 328
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 32 PDLDTMAGLRRITLCGNTQLGDAGLTKLLEVLADDLWIKALDVQNCGLTEATATATLNMM 91
P L + + L R+ L NT + G L E +AD++ + +D+++ + A A + M
Sbjct: 400 PALASNSHLHRLGL-QNTGINCEGAIILAECIADNIALLRVDIRDNPIALAGLLALHSAM 458
Query: 92 RSNTTLVVLDLRHNS-EISIESLSKY 116
+ NT++ +L++ + ++S E + +Y
Sbjct: 459 KMNTSITLLNIDASCVKLSSEKVREY 484
>Z82069-5|CAB04906.1| 740|Caenorhabditis elegans Hypothetical
protein W04A8.6 protein.
Length = 740
Score = 33.1 bits (72), Expect = 0.35
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 270 LVDTANDNNVEETIVNEATEAEMHGYSELRANI-VAKKAQSTHVKMLTNA 318
+ DT +D E + ++ + H YSEL+ANI V KK ++ +KML A
Sbjct: 363 MTDTIDDLGNENYQIRKSHDRLRHKYSELKANIEVEKKMKTDVLKMLQEA 412
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 29.9 bits (64), Expect = 3.3
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 107 EISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKD 166
EI + S GN+ G DG + +K +KD + ++ P K ++S + K
Sbjct: 171 EIENDESGTQSLDGNLDGVDGDGDEEEDLK---IKDEDEVEEDGPEKVKSQSEAMAMLK- 226
Query: 167 YTEVLEEQLQEEISHRQQLEEL 188
E + Q Q++ QQ++++
Sbjct: 227 --EAISAQSQQQTQQAQQVQQV 246
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 80 TEATATATLNMMRSNTTLVVLDLRHNSEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGA 139
+ A T ++S+TT V RH+ S ESL + + ++ N+ + T + + +
Sbjct: 465 SSARPTTYSTTVKSSTTTVSTSTRHDGSSSSESLEDMNDIFDI----NENFMDTTMTSSS 520
Query: 140 VKDRGTITKNAPSKYLAKSS 159
+ R NA +K KSS
Sbjct: 521 TRSRAHALPNAETKSSNKSS 540
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical protein
B0240.3 protein.
Length = 1093
Score = 29.5 bits (63), Expect = 4.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 127 NDGRIKTVVKNGAVKDRGTITKNAPSKYLAKSSVVKKEKDYTEVLEEQ--LQEEISHRQQ 184
ND + + K+G + T K LAK V+ + K+ E L+ Q LQE + ++
Sbjct: 976 NDELSRIMKKDGELLAAATALKPKDKMTLAKEKVIAERKNEEERLQRQQTLQEALEEHEE 1035
Query: 185 LEELN 189
E+N
Sbjct: 1036 EIEMN 1040
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.7 bits (61), Expect = 7.5
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 22 NWIHTLRYRLPDLDTMAGLRRITLCGNTQLGDAGLTK-LLEVLADDLWIKALDVQNCGLT 80
N + T+ Y +P + L+R+ L GN GLT + VL +L K +D+ N LT
Sbjct: 220 NLVSTIHY-VPA--SARNLKRLDLAGNRMEFVGGLTTGAVNVLPAEL--KHVDLSNNKLT 274
Query: 81 EATATATLNMMRSNTTLVVLDLRHNSEISIESLS 114
A ++ T L++LDL++NS ++S S
Sbjct: 275 YLHDHAFEHL----TNLILLDLKNNSLKEVKSSS 304
>Z19155-1|CAA79559.1| 397|Caenorhabditis elegans Hypothetical
protein F54G8.1 protein.
Length = 397
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 106 SEISIESLSKYSWLGNVSGCSNDGRIKTVVKNGAVK 141
S +S + +YS GN S CS+ G I T+ KN ++
Sbjct: 82 SLLSNLEIVQYSQTGNSSTCSSYGNIITIAKNSLLR 117
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 10.0
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 276 DNNVEETI-VNEATEAEMHGYSELRANIVAKKAQSTHVKMLTNAKMTKKMTK 326
DN+++E I EAT EM+ + R N +AK + +++ N K ++ +K
Sbjct: 870 DNSIQEKIDEKEATINEMNERLKSRENEIAKLHEEMYMQKTQNEKRNEEQSK 921
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,607,616
Number of Sequences: 27539
Number of extensions: 258638
Number of successful extensions: 737
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 721
Number of HSP's gapped (non-prelim): 21
length of query: 394
length of database: 12,573,161
effective HSP length: 83
effective length of query: 311
effective length of database: 10,287,424
effective search space: 3199388864
effective search space used: 3199388864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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