Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001058-TA|BGIBMGA001058-PA|undefined
(97 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 0.68
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 2.1
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 24 3.6
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 24 4.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 4.8
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 23 6.4
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 23 6.4
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 23 6.4
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 23 8.4
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 23 8.4
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 23 8.4
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.6 bits (56), Expect = 0.68
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 5 YDVTDADTDAVQSPTERDLNKQLEFDNDWSDELITSNXXXXXXXXXXXXXXXRNIFSDPE 64
Y +D+D +S TE+D +K+ + +D ++S ++ SD +
Sbjct: 190 YGAVISDSDDDESNTEQDHSKESNLNTADNDLALSSTIEGKKTSTSKEALESESLLSDSD 249
Query: 65 SEWNGRRSNSE-SDAEQPEADRRPHG 89
SNS SD +R G
Sbjct: 250 QSMTNISSNSTVSDLNLKTLKKRLRG 275
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 25.0 bits (52), Expect = 2.1
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 6 DVTD-ADTDAVQSPTERDLNKQLEFDNDWSDE 36
DV+D D + +S +++ N E+D+D SDE
Sbjct: 167 DVSDNTDEERTESKGQQESNSAEEYDDDDSDE 198
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 24.2 bits (50), Expect = 3.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 6 DVTDADTDAVQSPTERDLNKQLEFDNDWSDE 36
D DAD D ++P E +N++ + D D DE
Sbjct: 24 DDDDADMDQDKNPEENVMNEKEDEDVDAVDE 54
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 23.8 bits (49), Expect = 4.8
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 64 ESEWNGRRSNSESDAEQPEADRRP 87
+S N +S+SE+ +E+P + ++P
Sbjct: 87 DSHVNANKSSSETSSEKPRSVKKP 110
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1 MTEIYDVTDADTDAVQSPTERDLNKQLEFDNDW 33
M +YD T D + ++ L+ + D+DW
Sbjct: 85 MKALYDYTQQSVDEISFQADQTLDCYGDTDSDW 117
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 23.4 bits (48), Expect = 6.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 18 PTERDLNKQLEFDNDWSDELITSN 41
P + D + Q+ N W+DE I ++
Sbjct: 715 PRDADYHNQINLQNLWNDENINAS 738
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 23.4 bits (48), Expect = 6.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 58 NIFSDPESEWNGRRSNSESDAEQPEADRRPHGSAY 92
NIF+D ++ NG S++ + +P A S +
Sbjct: 624 NIFNDKKTSENGLASSTVASESKPSAPESKPSSGF 658
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 23.4 bits (48), Expect = 6.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 4 IYDVTDADTDAVQSPTERDLNKQLEFDNDWSD 35
I D+TD +T + +++ FD DW D
Sbjct: 126 IPDITDKETIYSLGKMSYNAYQKIPFDGDWLD 157
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 23.0 bits (47), Expect = 8.4
Identities = 6/32 (18%), Positives = 25/32 (78%)
Query: 6 DVTDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
++ +++ D +S ++ LN++++++ND+++++
Sbjct: 607 ELLNSEIDKHRSESQAALNRRVKWENDFNNKI 638
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 64 ESEWNGRRSNSESDAEQPEADRR 86
E E N +R SESD E EA +
Sbjct: 632 EDEDNLKRKRSESDVEDNEAKEK 654
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 1 MTEIYDVTDADTDAVQSPTERDLNKQLEFDN 31
MT + T D QS + D+N++ DN
Sbjct: 975 MTNAFGTTTKPKDVSQSDIKVDINRESNSDN 1005
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.306 0.124 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,343
Number of Sequences: 5004
Number of extensions: 12784
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 11
length of query: 97
length of database: 2,362,478
effective HSP length: 62
effective length of query: 35
effective length of database: 2,052,230
effective search space: 71828050
effective search space used: 71828050
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 47 (23.0 bits)
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