GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001058-TA|BGIBMGA001058-PA|undefined
         (97 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30717| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.56)           27   3.1  
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.1  
SB_41291| Best HMM Match : Piwi (HMM E-Value=0)                        26   5.4  
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_41563| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_3954| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   7.2  
SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   7.2  
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.5  

>SB_30717| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.56)
          Length = 499

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 62  DPESEWNGRRSNSESDAEQPEADRRPH 88
           D E+E +G  S++ESD    E  RR H
Sbjct: 278 DKETEDSGEASDAESDISMEETRRRMH 304


>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1994

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 62   DPESEWNGRRSNSESDAEQPEADRRPH 88
            D E+E +G  S++ESD    E  RR H
Sbjct: 1674 DKETEDSGEASDAESDISMEETRRRMH 1700


>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
          Length = 598

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 7  VTDADTDAVQSPTERDLNKQLEFDNDWSDELITSN 41
          +TD  T A+   T +  N++    N W DEL T++
Sbjct: 9  LTDEQTAAMIRKTAKPANERQRDINQWVDELATAS 43


>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 662

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 4   IYDVTDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
           +Y   +   D +Q   + DLNK  E+ N W  EL
Sbjct: 404 LYLTIETSDDVIQ--LQNDLNKLYEWSNKWQMEL 435


>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 903

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 64  ESEWNGRRSNSESDAEQPEADRR 86
           +  W GRR+  +++ E+ E +RR
Sbjct: 520 DDSWRGRRARRKAEEERKERERR 542


>SB_41563| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 4  IYDVTDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
          +Y   +   D +Q   + DLNK  E+ N W  EL
Sbjct: 18 LYLTIETSDDVIQ--LQNDLNKLYEWSNKWQMEL 49


>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 689

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 4   IYDVTDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
           +Y   +   D +Q   + DLNK  E+ N W  EL
Sbjct: 472 LYLTIETSDDVIQ--LQNDLNKLYEWSNKWQMEL 503


>SB_3954| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 184

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 60  FSDPESEWNGRRSNSESDAEQPEADRR 86
           F+ P S + GR + S+++A Q  AD R
Sbjct: 155 FTGPNSFYLGRSTKSDAEAIQENADER 181


>SB_2460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 555

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 68  NGRRSNSESDAEQPEADRRPH 88
           N +RSNSE   ++P  D R H
Sbjct: 413 NRKRSNSEGKDDKPNGDGRQH 433


>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1720

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 58   NIFSDPESEWNGRRSNSESDAEQPEADRRPHGSAY 92
            +   + ESEW  +RS+S   +E+ E +     + Y
Sbjct: 1641 DFLEEGESEWPKKRSDSIQQSEEAEIETNKMSAVY 1675


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.306    0.124    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,044,642
Number of Sequences: 59808
Number of extensions: 94289
Number of successful extensions: 134
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 127
Number of HSP's gapped (non-prelim): 10
length of query: 97
length of database: 16,821,457
effective HSP length: 71
effective length of query: 26
effective length of database: 12,575,089
effective search space: 326952314
effective search space used: 326952314
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 52 (25.0 bits)