GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001058-TA|BGIBMGA001058-PA|undefined
         (97 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        23   1.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    22   4.5  

>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 1  MTEIYDVTDADTDAVQSPTERDLNKQLEFDN 31
          +T IY+ +D       S T+R+L+  ++ DN
Sbjct: 64 LTLIYEASDTSFGNAVSNTKRELSSVIQNDN 94


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 66  EWNGRRSNSESDA 78
           EW  +R+NS  DA
Sbjct: 125 EWGSKRTNSRGDA 137


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.306    0.124    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,805
Number of Sequences: 2123
Number of extensions: 2655
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 97
length of database: 516,269
effective HSP length: 55
effective length of query: 42
effective length of database: 399,504
effective search space: 16779168
effective search space used: 16779168
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.5 bits)
S2: 42 (21.0 bits)