Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001058-TA|BGIBMGA001058-PA|undefined
(97 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D63875-1|BAA09925.2| 1195|Homo sapiens KIAA0155 protein. 29 2.3
BC058914-1|AAH58914.1| 1173|Homo sapiens Ctr9, Paf1/RNA polymera... 29 2.3
AK129960-1|BAC85259.1| 488|Homo sapiens protein ( Homo sapiens ... 28 4.1
AY157302-1|AAO17043.1| 901|Homo sapiens neuronal PAS3 transcrip... 27 9.4
AF164438-1|AAG35180.1| 901|Homo sapiens basic-helix-loop-helix-... 27 9.4
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 27 9.4
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 27 9.4
AB055962-1|BAC53756.1| 933|Homo sapiens NPAS3 protein. 27 9.4
AB054576-1|BAC53754.1| 920|Homo sapiens NPAS3 variant protein. 27 9.4
AB054575-1|BAB21221.1| 903|Homo sapiens NPAS3 (MOP6) protein. 27 9.4
>D63875-1|BAA09925.2| 1195|Homo sapiens KIAA0155 protein.
Length = 1195
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 70 RRSNSESDAEQPEADRRPHGS 90
+RS+ +SD++QP RRP GS
Sbjct: 1101 QRSDQDSDSDQPSRKRRPSGS 1121
>BC058914-1|AAH58914.1| 1173|Homo sapiens Ctr9, Paf1/RNA polymerase II
complex component, homolog (S. cerevisiae) protein.
Length = 1173
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 70 RRSNSESDAEQPEADRRPHGS 90
+RS+ +SD++QP RRP GS
Sbjct: 1079 QRSDQDSDSDQPSRKRRPSGS 1099
>AK129960-1|BAC85259.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ26450 fis, clone KDN03005. ).
Length = 488
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 57 RNIFSDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
R F + E EW GR S ESD +Q + D +L AD
Sbjct: 134 RRRFENREGEWEGRVSELESDVKQLQ-DELERQQIHLREAD 173
>AY157302-1|AAO17043.1| 901|Homo sapiens neuronal PAS3 transcript
variant 1 protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 59 IFSDPESEWNGRRSNSESDAEQPEADRRPHGSA 91
I D E+ + + N ++E PE DR+ G+A
Sbjct: 442 ITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA 474
>AF164438-1|AAG35180.1| 901|Homo sapiens basic-helix-loop-helix-PAS
protein protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 59 IFSDPESEWNGRRSNSESDAEQPEADRRPHGSA 91
I D E+ + + N ++E PE DR+ G+A
Sbjct: 442 ITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA 474
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 6 DVTDADTDAVQSPTERDLNKQLEFDNDWSDELITSNXXXXXXXXXXXXXXXRNIFSDPES 65
D +D+D+ S ++ D + D+ SD +SN + SD +S
Sbjct: 565 DSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKS 624
Query: 66 EWNGRRS-NSESDAEQPEADRRPHGSA 91
+ + S +S+SD++ +D S+
Sbjct: 625 DSSKSESDSSDSDSKSDSSDSNSSDSS 651
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 6 DVTDADTDAVQSPTERDLNKQLEFDNDWSDELITSNXXXXXXXXXXXXXXXRNIFSDPES 65
D +D+D+ S ++ D + D+ SD +SN + SD +S
Sbjct: 103 DSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKS 162
Query: 66 EWNGRRS-NSESDAEQPEADRRPHGSA 91
+ + S +S+SD++ +D S+
Sbjct: 163 DSSKSESDSSDSDSKSDSSDSNSSDSS 189
>AB055962-1|BAC53756.1| 933|Homo sapiens NPAS3 protein.
Length = 933
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 59 IFSDPESEWNGRRSNSESDAEQPEADRRPHGSA 91
I D E+ + + N ++E PE DR+ G+A
Sbjct: 474 ITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA 506
>AB054576-1|BAC53754.1| 920|Homo sapiens NPAS3 variant protein.
Length = 920
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 59 IFSDPESEWNGRRSNSESDAEQPEADRRPHGSA 91
I D E+ + + N ++E PE DR+ G+A
Sbjct: 461 ITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA 493
>AB054575-1|BAB21221.1| 903|Homo sapiens NPAS3 (MOP6) protein.
Length = 903
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 59 IFSDPESEWNGRRSNSESDAEQPEADRRPHGSA 91
I D E+ + + N ++E PE DR+ G+A
Sbjct: 444 ITEDNENSKSDEKGNQSENSEDPEPDRKKSGNA 476
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.306 0.124 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,678,475
Number of Sequences: 224733
Number of extensions: 357112
Number of successful extensions: 487
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 479
Number of HSP's gapped (non-prelim): 10
length of query: 97
length of database: 73,234,838
effective HSP length: 74
effective length of query: 23
effective length of database: 56,604,596
effective search space: 1301905708
effective search space used: 1301905708
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 57 (27.1 bits)
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