GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001058-TA|BGIBMGA001058-PA|undefined
         (97 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029117-1|ABJ17050.1|  218|Drosophila melanogaster IP15317p pro...    32   0.096
AF036584-1|AAB88863.1|  472|Drosophila melanogaster homothorax h...    32   0.096
AF026788-1|AAC47759.1|  458|Drosophila melanogaster homothorax p...    32   0.096
AE014297-1156|AAN13475.2|  472|Drosophila melanogaster CG17117-P...    32   0.096
AY118913-1|AAM50773.1|  399|Drosophila melanogaster LD21748p pro...    27   3.6  
AE014297-1158|AAN13477.2|  457|Drosophila melanogaster CG17117-P...    27   3.6  
AE014297-1155|AAF54533.2|  471|Drosophila melanogaster CG17117-P...    27   3.6  
AE014296-1658|AAF50269.1|  399|Drosophila melanogaster CG3891-PA...    27   3.6  
BT016109-1|AAV36994.1|  496|Drosophila melanogaster LD14545p pro...    27   4.8  
AE014134-2133|AAF53147.2|  496|Drosophila melanogaster CG5304-PA...    27   4.8  

>BT029117-1|ABJ17050.1|  218|Drosophila melanogaster IP15317p
          protein.
          Length = 218

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 61 SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
          SDP+  W  R  +S +DA   +A RR + S +L   D
Sbjct: 27 SDPDGRWCRREWSSPADARNADASRRLYSSVFLGSPD 63


>AF036584-1|AAB88863.1|  472|Drosophila melanogaster homothorax
           homeoprotein protein.
          Length = 472

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 61  SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
           SDP+  W  R  +S +DA   +A RR + S +L   D
Sbjct: 281 SDPDGRWCRREWSSPADARNADASRRLYSSVFLGSPD 317


>AF026788-1|AAC47759.1|  458|Drosophila melanogaster homothorax
           protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 61  SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
           SDP+  W  R  +S +DA   +A RR + S +L   D
Sbjct: 267 SDPDGRWCRREWSSPADARNADASRRLYSSVFLGSPD 303


>AE014297-1156|AAN13475.2|  472|Drosophila melanogaster CG17117-PA,
           isoform A protein.
          Length = 472

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 61  SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
           SDP+  W  R  +S +DA   +A RR + S +L   D
Sbjct: 281 SDPDGRWCRREWSSPADARNADASRRLYSSVFLGSPD 317


>AY118913-1|AAM50773.1|  399|Drosophila melanogaster LD21748p
           protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 58  NIFSDPESEWNGRRSNSESDAEQPEADRRP 87
           NI +D  +   G  +NSE ++ + EAD  P
Sbjct: 261 NISADVSTSTTGTNTNSEDESSKGEADEEP 290


>AE014297-1158|AAN13477.2|  457|Drosophila melanogaster CG17117-PD,
           isoform D protein.
          Length = 457

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 61  SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
           SDP   W  R  +S +DA   +A RR + S +L   D
Sbjct: 267 SDP-GRWCRREWSSPADARNADASRRLYSSVFLGSPD 302


>AE014297-1155|AAF54533.2|  471|Drosophila melanogaster CG17117-PB,
           isoform B protein.
          Length = 471

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 61  SDPESEWNGRRSNSESDAEQPEADRRPHGSAYLAYAD 97
           SDP   W  R  +S +DA   +A RR + S +L   D
Sbjct: 281 SDP-GRWCRREWSSPADARNADASRRLYSSVFLGSPD 316


>AE014296-1658|AAF50269.1|  399|Drosophila melanogaster CG3891-PA
           protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 58  NIFSDPESEWNGRRSNSESDAEQPEADRRP 87
           NI +D  +   G  +NSE ++ + EAD  P
Sbjct: 261 NISADVSTSTTGTNTNSEDESSKGEADEEP 290


>BT016109-1|AAV36994.1|  496|Drosophila melanogaster LD14545p
          protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 8  TDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
          TD D++A+  P + D    +  D +WS+EL
Sbjct: 55 TDDDSEAICEPDDIDEGTSVGGDFEWSEEL 84


>AE014134-2133|AAF53147.2|  496|Drosophila melanogaster CG5304-PA
          protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 8  TDADTDAVQSPTERDLNKQLEFDNDWSDEL 37
          TD D++A+  P + D    +  D +WS+EL
Sbjct: 55 TDDDSEAICEPDDIDEGTSVGGDFEWSEEL 84


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.306    0.124    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,524,792
Number of Sequences: 52641
Number of extensions: 137100
Number of successful extensions: 210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 202
Number of HSP's gapped (non-prelim): 10
length of query: 97
length of database: 24,830,863
effective HSP length: 73
effective length of query: 24
effective length of database: 20,988,070
effective search space: 503713680
effective search space used: 503713680
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 54 (25.8 bits)