GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001057-TA|BGIBMGA001057-PA|undefined
         (58 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-P...    27   2.4  
AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p pro...    27   4.1  
AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-P...    27   4.1  

>AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-PA
           protein.
          Length = 827

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)

Query: 3   KSVWKLSLNLLQQLHGFVYTSHDRSEAAARIYYKLTTEAKRETNEGHLLERRTKK 57
           ++V  ++LN L +  GF  + HD  +   RI+ +L +++  +T     L    KK
Sbjct: 520 RNVEPVNLNHLARSRGFTQSQHDMLQQQLRIHTQLLSQSYLQTYSHPTLYPMAKK 574


>AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p
           protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 7   KLSLNLLQQLHGFVYTSHDRSEAAARIYYKLTTEAKRETNEGHLLERRTKK 57
           ++ + LL+ L   + T H       R+   +  EA  +TN+  LLE   K+
Sbjct: 287 QMHIKLLELLEIVIKTCHTHLRMDFRLVLNILMEALEKTNKSMLLESNLKE 337


>AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-PA
           protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 7   KLSLNLLQQLHGFVYTSHDRSEAAARIYYKLTTEAKRETNEGHLLERRTKK 57
           ++ + LL+ L   + T H       R+   +  EA  +TN+  LLE   K+
Sbjct: 287 QMHIKLLELLEIVIKTCHTHLRMDFRLVLNILMEALEKTNKSMLLESNLKE 337


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.125    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,037
Number of Sequences: 52641
Number of extensions: 61361
Number of successful extensions: 134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131
Number of HSP's gapped (non-prelim): 3
length of query: 58
length of database: 24,830,863
effective HSP length: 39
effective length of query: 19
effective length of database: 22,777,864
effective search space: 432779416
effective search space used: 432779416
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)