Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001056-TA|BGIBMGA001056-PA|IPR002641|Patatin
         (341 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051668-1|AAK93092.1|  507|Drosophila melanogaster LD21785p pro...   528   e-150
AE014296-2430|AAF49704.1|  507|Drosophila melanogaster CG5295-PA...   528   e-150
AY069470-1|AAL39615.1|  480|Drosophila melanogaster LD21294p pro...   337   1e-92
AE014298-2095|AAF48418.1|  480|Drosophila melanogaster CG5560-PA...   337   1e-92
AY094804-1|AAM11157.1|  607|Drosophila melanogaster LD25464p pro...    30   4.0  
AE014297-981|AAF54410.1|  607|Drosophila melanogaster CG8301-PA ...    30   4.0  
AE013599-36|EAA46000.1|  748|Drosophila melanogaster CG17528-PD,...    30   4.0  
AE013599-35|EAA45997.1|  748|Drosophila melanogaster CG17528-PC,...    30   4.0  
AY095088-1|AAM11416.1|  748|Drosophila melanogaster RE56868p pro...    30   5.3  

>AY051668-1|AAK93092.1|  507|Drosophila melanogaster LD21785p
           protein.
          Length = 507

 Score =  528 bits (1303), Expect = e-150
 Identities = 236/341 (69%), Positives = 287/341 (84%), Gaps = 4/341 (1%)

Query: 1   MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLGKISGASFGALSACCLLCDLPIGEITSDV 60
           MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLL KI GAS G+L+ACCLLCDLP+G +TSD 
Sbjct: 1   MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLEKIGGASAGSLAACCLLCDLPLGSMTSDF 60

Query: 61  LRVVREARSGSLGPFSPSFNIQNVLLEGMEKYLPEDAHKIVSGKLHISLTRVYDGKNVIV 120
            RVV EAR  SLGPFSPSFNIQ  LLEG++K+LP+DAHK V+G+LHISLTRVYDGKNVI+
Sbjct: 61  FRVVNEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVII 120

Query: 121 SEFPTREDLLQAVMASCFVPVFSGLLPPRFHGIRYMDGGFSDNLPVLDENTITVSPFCGE 180
           SEF +RE++LQA++ +CF+P FSG+LPPRF G+RYMDG FSDNLP+LDENTITVSPFCGE
Sbjct: 121 SEFESREEVLQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILDENTITVSPFCGE 180

Query: 181 SDICPRDLSSQLFHVNLANTSIELSKQNMNRFARILFPPKPEVLSNMCKQGFDDALRFLH 240
           SDICPRD SSQLFH+N ANTSIE+S+QN+NRF RILFPP+PE LS  C+QGFDDAL+FLH
Sbjct: 181 SDICPRDQSSQLFHLNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLH 240

Query: 241 RNNLISCTRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNA 300
           RNNLI+C RC+AVQSTF + + +     ++DP+C ECK HR+DAL  ++P TV+ + Q+ 
Sbjct: 241 RNNLINCRRCVAVQSTFVVSETVAQ-PQEFDPECRECKKHRKDALSSNMPQTVLDVIQDY 299

Query: 301 IDSANNGIVNWVMKQRAVRYLNLLTLPYRVPIDIMYATFTK 341
           I+ AN G+ NW+ K R ++   LL+LP  VP+D + AT +K
Sbjct: 300 IEQANKGLANWIFKHRGIK---LLSLPATVPMDFLLATISK 337


>AE014296-2430|AAF49704.1|  507|Drosophila melanogaster CG5295-PA
           protein.
          Length = 507

 Score =  528 bits (1303), Expect = e-150
 Identities = 236/341 (69%), Positives = 287/341 (84%), Gaps = 4/341 (1%)

Query: 1   MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLGKISGASFGALSACCLLCDLPIGEITSDV 60
           MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLL KI GAS G+L+ACCLLCDLP+G +TSD 
Sbjct: 1   MNLSFAGCGFLGIYHVGVAVCFKKYAPHLLLEKIGGASAGSLAACCLLCDLPLGSMTSDF 60

Query: 61  LRVVREARSGSLGPFSPSFNIQNVLLEGMEKYLPEDAHKIVSGKLHISLTRVYDGKNVIV 120
            RVV EAR  SLGPFSPSFNIQ  LLEG++K+LP+DAHK V+G+LHISLTRVYDGKNVI+
Sbjct: 61  FRVVNEARRYSLGPFSPSFNIQTCLLEGLQKHLPDDAHKRVNGRLHISLTRVYDGKNVII 120

Query: 121 SEFPTREDLLQAVMASCFVPVFSGLLPPRFHGIRYMDGGFSDNLPVLDENTITVSPFCGE 180
           SEF +RE++LQA++ +CF+P FSG+LPPRF G+RYMDG FSDNLP+LDENTITVSPFCGE
Sbjct: 121 SEFESREEVLQALLCACFIPGFSGILPPRFRGVRYMDGAFSDNLPILDENTITVSPFCGE 180

Query: 181 SDICPRDLSSQLFHVNLANTSIELSKQNMNRFARILFPPKPEVLSNMCKQGFDDALRFLH 240
           SDICPRD SSQLFH+N ANTSIE+S+QN+NRF RILFPP+PE LS  C+QGFDDAL+FLH
Sbjct: 181 SDICPRDQSSQLFHLNWANTSIEISRQNINRFVRILFPPRPEFLSKFCQQGFDDALQFLH 240

Query: 241 RNNLISCTRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNA 300
           RNNLI+C RC+AVQSTF + + +     ++DP+C ECK HR+DAL  ++P TV+ + Q+ 
Sbjct: 241 RNNLINCRRCVAVQSTFVVSETVAQ-PQEFDPECRECKKHRKDALSSNMPQTVLDVIQDY 299

Query: 301 IDSANNGIVNWVMKQRAVRYLNLLTLPYRVPIDIMYATFTK 341
           I+ AN G+ NW+ K R ++   LL+LP  VP+D + AT +K
Sbjct: 300 IEQANKGLANWIFKHRGIK---LLSLPATVPMDFLLATISK 337


>AY069470-1|AAL39615.1|  480|Drosophila melanogaster LD21294p
           protein.
          Length = 480

 Score =  337 bits (829), Expect = 1e-92
 Identities = 151/247 (61%), Positives = 198/247 (80%), Gaps = 2/247 (0%)

Query: 2   NLSFAGCGFLGIYHVGVAVCFKKYAPHLLLGKISGASFGALSACCLLCDLPIGEITSDVL 61
           +LSF+GCGFLGIYHVGVAVC +++AP LLL +I+GAS GAL+ACCL+CDLP+  +  D L
Sbjct: 8   SLSFSGCGFLGIYHVGVAVCLRQHAPQLLLERIAGASAGALAACCLICDLPLECMAGDFL 67

Query: 62  RVVREARSGSLGPFSPSFNIQNVLLEGMEKYLPEDAHKIVSGKLHISLTRVYDGKNVIVS 121
           RVV+E +  SLG FSP FN+   LLEGM  +LPEDAH + SG+LHISLTRV D +NV++S
Sbjct: 68  RVVQEIQRHSLGAFSPWFNLPECLLEGMRSWLPEDAHLLASGRLHISLTRVSDRRNVVMS 127

Query: 122 EFPTREDLLQAVMASCFVPVFSGLLPPRFHGIRYMDGGFSDNLPVLDENTITVSPFCGES 181
           EF +R++LLQA+M SCF+P  SGL+PP+  G+RYMDG FSDNLP+LDE+T+TVSPFCGES
Sbjct: 128 EFSSRQELLQALMCSCFIPGLSGLVPPQVRGVRYMDGAFSDNLPLLDEHTVTVSPFCGES 187

Query: 182 DICPRDLSSQLFHVNL--ANTSIELSKQNMNRFARILFPPKPEVLSNMCKQGFDDALRFL 239
           DICPRD +  L  +N+  ANT I LS++N+ R  RIL P + + ++N C+QG+DD L+FL
Sbjct: 188 DICPRDQNPHLLQLNINWANTCIRLSRRNLRRMVRILVPGRADFMANFCQQGYDDTLQFL 247

Query: 240 HRNNLIS 246
            RN+L++
Sbjct: 248 RRNSLLN 254


>AE014298-2095|AAF48418.1|  480|Drosophila melanogaster CG5560-PA
           protein.
          Length = 480

 Score =  337 bits (829), Expect = 1e-92
 Identities = 151/247 (61%), Positives = 198/247 (80%), Gaps = 2/247 (0%)

Query: 2   NLSFAGCGFLGIYHVGVAVCFKKYAPHLLLGKISGASFGALSACCLLCDLPIGEITSDVL 61
           +LSF+GCGFLGIYHVGVAVC +++AP LLL +I+GAS GAL+ACCL+CDLP+  +  D L
Sbjct: 8   SLSFSGCGFLGIYHVGVAVCLRQHAPQLLLERIAGASAGALAACCLICDLPLECMAGDFL 67

Query: 62  RVVREARSGSLGPFSPSFNIQNVLLEGMEKYLPEDAHKIVSGKLHISLTRVYDGKNVIVS 121
           RVV+E +  SLG FSP FN+   LLEGM  +LPEDAH + SG+LHISLTRV D +NV++S
Sbjct: 68  RVVQEIQRHSLGAFSPWFNLPECLLEGMRSWLPEDAHLLASGRLHISLTRVSDRRNVVMS 127

Query: 122 EFPTREDLLQAVMASCFVPVFSGLLPPRFHGIRYMDGGFSDNLPVLDENTITVSPFCGES 181
           EF +R++LLQA+M SCF+P  SGL+PP+  G+RYMDG FSDNLP+LDE+T+TVSPFCGES
Sbjct: 128 EFSSRQELLQALMCSCFIPGLSGLVPPQVRGVRYMDGAFSDNLPLLDEHTVTVSPFCGES 187

Query: 182 DICPRDLSSQLFHVNL--ANTSIELSKQNMNRFARILFPPKPEVLSNMCKQGFDDALRFL 239
           DICPRD +  L  +N+  ANT I LS++N+ R  RIL P + + ++N C+QG+DD L+FL
Sbjct: 188 DICPRDQNPHLLQLNINWANTCIRLSRRNLRRMVRILVPGRADFMANFCQQGYDDTLQFL 247

Query: 240 HRNNLIS 246
            RN+L++
Sbjct: 248 RRNSLLN 254


>AY094804-1|AAM11157.1|  607|Drosophila melanogaster LD25464p
           protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 246 SCTRCLAVQSTFQLQD-VLDDTTYDYDPD----CEECKTHRQDA 284
           +C  CL  Q  +QLQ  +L+     +DP+    C EC+   QDA
Sbjct: 188 ACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDA 231


>AE014297-981|AAF54410.1|  607|Drosophila melanogaster CG8301-PA
           protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 246 SCTRCLAVQSTFQLQD-VLDDTTYDYDPD----CEECKTHRQDA 284
           +C  CL  Q  +QLQ  +L+     +DP+    C EC+   QDA
Sbjct: 188 ACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDA 231


>AE013599-36|EAA46000.1|  748|Drosophila melanogaster CG17528-PD,
           isoform D protein.
          Length = 748

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 248 TRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNAI 301
           T    ++ T Q  +V +D  Y+ D D  E  +  QD  +DDL +   +   N++
Sbjct: 41  TEASIIEKTNQPHNVQEDNNYNRDCDSPESSSSEQDKELDDLRNLHSSSLTNSV 94


>AE013599-35|EAA45997.1|  748|Drosophila melanogaster CG17528-PC,
           isoform C protein.
          Length = 748

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 248 TRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNAI 301
           T    ++ T Q  +V +D  Y+ D D  E  +  QD  +DDL +   +   N++
Sbjct: 41  TEASIIEKTNQPHNVQEDNNYNRDCDSPESSSSEQDKELDDLRNLHSSSLTNSV 94


>AY095088-1|AAM11416.1|  748|Drosophila melanogaster RE56868p
           protein.
          Length = 748

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 248 TRCLAVQSTFQLQDVLDDTTYDYDPDCEECKTHRQDALVDDLPDTVMTIFQNAI 301
           T    ++ T Q  +V +D  Y+ D D  E  +  QD  +DDL +   +   N++
Sbjct: 41  TEASIIEKTNQPHNVQEDNNYNRDCDSPESSSWEQDKELDDLRNLHSSSLTNSV 94


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,458
Number of Sequences: 52641
Number of extensions: 751134
Number of successful extensions: 1980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1967
Number of HSP's gapped (non-prelim): 9
length of query: 341
length of database: 24,830,863
effective HSP length: 85
effective length of query: 256
effective length of database: 20,356,378
effective search space: 5211232768
effective search space used: 5211232768
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)