GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001056-TA|BGIBMGA001056-PA|IPR002641|Patatin
         (341 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   1.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   4.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   4.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.1  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   9.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 27  PHLLLGKISGAS---FGALSACCLLCDLPIGEITSDVLRVVREARSGSLGPFSPSFNIQN 83
           PH ++ + S ++   F  L     LC LP+         +V    S   GPFS S  I +
Sbjct: 588 PHEVVFRASRSNNFYFALLLTMLFLCVLPVS------YAIVFLEPSWHCGPFSNSNRIYH 641

Query: 84  VLLEGMEKYLPEDAHKIV 101
           +L    E+ +PE   K +
Sbjct: 642 LLTNATEQIIPEMITKYI 659


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 249 RCLAVQSTFQLQDVLDDTTYDYDPD--CEECKTHRQDAL 285
           RC+   +T    D ++ T Y +DP    E CK  ++  L
Sbjct: 246 RCMRTGTTHHEADAIEQTFYCFDPIVLLELCKLRKETEL 284


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 249 RCLAVQSTFQLQDVLDDTTYDYDPD--CEECKTHRQDAL 285
           RC+   +T    D ++ T Y +DP    E CK  ++  L
Sbjct: 246 RCMRTGTTHHEADAIEQTFYCFDPIVLLELCKLRKETEL 284


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 194  HVNLANTSIELSKQNMNRFARILFPPKPEVLSNMCKQG 231
            H ++    +  S  N+N  A +  P   EV + +C  G
Sbjct: 1461 HTSIDVDHVRFSPLNLNFRANVYTPDTAEVRATLCNNG 1498


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 17/118 (14%)

Query: 219 PKPEVLSNMCKQGFDDALRFLHRNNLISCTRCLAVQSTFQLQDVLDDTTYDYDPDCEECK 278
           P P+  S  C+Q  DDA R + + +     R  A     QL     +T  +     +E K
Sbjct: 88  PAPDPSSQFCQQLLDDAQRQMEQEH-----RQYAATLEEQLHAAQQETQQE-----QEMK 137

Query: 279 THRQDALVDDLPDTVMTIFQNAIDSANNGIVNWVMKQRAVRYLNLLTLPYRVPIDIMY 336
              Q  L D L D+   ++   ID     I     KQ A+ Y NL  +P  +PID ++
Sbjct: 138 KALQKQL-DALTDSRNALY---IDLLLANIAIGETKQ-ALSYYNL--MPASMPIDKLH 188


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 87   EGMEKYLPEDAHKIVSGKLHISLTRVYDG 115
            EG+ KY+     K++    H SL R Y+G
Sbjct: 2445 EGLSKYVSYGLLKLLDINPHSSLFRSYNG 2473


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,585
Number of Sequences: 2123
Number of extensions: 15781
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 6
length of query: 341
length of database: 516,269
effective HSP length: 64
effective length of query: 277
effective length of database: 380,397
effective search space: 105369969
effective search space used: 105369969
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 48 (23.4 bits)