Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001055-TA|BGIBMGA001055-PA|undefined
(687 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 36 0.025
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 33 0.17
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 31 0.70
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 31 0.70
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.70
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 30 1.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 1.2
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 29 1.6
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 29 1.6
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 29 2.8
SPAC29E6.05c ||SPAC30.09c|peptide methionine sulfoxide reductase... 28 4.9
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 28 4.9
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 28 4.9
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 28 4.9
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 6.5
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 6.5
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 6.5
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 27 6.5
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 27 8.6
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 27 8.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 8.6
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 27 8.6
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 35.5 bits (78), Expect = 0.025
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 515 QFHSTHFDIRSSPIKPTSTVFRKFQITPDKLSNYDGQIIGAVNMVDKAFEETNNINGLIN 574
++ S + S IKPT V + F + P DGQ + V+ TNN +G +N
Sbjct: 649 EYASRFYKFVESSIKPTLLVLKPFPLKPQ-----DGQRVNKQQSVNAGNVRTNNKHGSLN 703
Query: 575 NDIELPCKENAIDQSWILSSDKSEDGFTKP 604
N+ P NA S S K+E F P
Sbjct: 704 NN-TAPSSRNAKSTS-AHKSPKTEHRFPFP 731
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 43 SDNLKSFYEKSGSIENSIPNVIKAPAPRTIKKIDP-AAVGNNLKLASFLLPKTEPSKPYV 101
++++ Y SGS+EN +P + + +P AV N L S +TEP P
Sbjct: 90 ANSINQPYNYSGSLENLVPTPSAGTPSQFMDAQNPYGAVYNALSQFS----ETEPKMPSY 145
Query: 102 LNNVILKPSLPAVSNTRKINLQSTEQK 128
+++ SLP +++ ++ Q T QK
Sbjct: 146 MDDEEASDSLPLSLSSQSLSSQVTNQK 172
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 444 LDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGIDTSRFNESM-VASNECNDVNN 502
LDE E A+ +E + +T R S + +D+LT+L I S ++ V + + +N+
Sbjct: 19 LDELEGNHESHPAITHQEKVTQTHRDSVKIDDILTRLSISKSESGQATPVLTPQLEGMND 78
Query: 503 KVTLDQSK 510
+L SK
Sbjct: 79 YFSLGPSK 86
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 30.7 bits (66), Expect = 0.70
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 10/215 (4%)
Query: 440 KKIRLDEKHTLLELDLAVKREEDLNETKRLSFESEDLL-TKLGIDTSRFNESMVASNECN 498
KK+ +D H + +LDL + L + K DLL +L + E + N
Sbjct: 152 KKLSVDNAHLIKQLDLLSSNMKTLMKEKTKVQGQRDLLEQRLQGLMKKLTEVESLTVSLN 211
Query: 499 DVNNKVTLDQSKNNHIQFHSTHFDIRSSPIKPTSTVFRKFQITPDKLSNYDGQIIGAVNM 558
D NK+TL+ + N I H + S + +T D+ N D + + +
Sbjct: 212 DEKNKLTLELT-NLRICLHELQLNAEKGETIDESEDSKNTLVTEDE--NDDSVFLESSS- 267
Query: 559 VDKAFEETNNINGLINNDIELPCKENAIDQSWILSSDKSEDGFTKPDSLIEPSLIHVKDT 618
DK F ++++ + + P +S + +S K +L + L+ V
Sbjct: 268 -DKYF-DSSSFDAEQEEKHDFPIDPFLSLESNVQTSVSQSSAVLKSINLAKQELVSVNHL 325
Query: 619 DTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLN 653
+ + N+S +I+ N ++ +S LN
Sbjct: 326 VADDTKTPSPNLS---SEIIENTKADIKKSIRSLN 357
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 30.7 bits (66), Expect = 0.70
Identities = 24/104 (23%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 441 KIRLDEKHTLL-ELDLAVKREEDLNET--KRLSFESEDLLTKLGIDTSRFNESMVASNEC 497
K +L E+ T L EL + ++++ ET +R+S +++L + I+ ++ NE +A +C
Sbjct: 805 KNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKC 864
Query: 498 NDVNNKVTLDQ--SKNNHIQFHSTHFDIRSSPIKPTSTVFRKFQ 539
+++ K+ +K + + S D+ ++ K ST+ ++ +
Sbjct: 865 SNLQEKINFGNKLAKEHTEKISSLEKDLEAA-TKTASTLSKELK 907
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 534 VFRKFQITPDKLSNYDGQIIGAVNMVDKAFEETNNINGLINNDIE-LPCKENAIDQSWIL 592
+F K Q PD + Y ++ V A EE I ++ E C++N +D L
Sbjct: 67 LFMKCQKHPDAAA-YKKELFDYYQGVRNALEEIELIKPIVKEQYEQYQCQKNDLDDLKKL 125
Query: 593 SSDKSEDGFTKPDSLIEPSLI 613
S S+ KP S ++ ++
Sbjct: 126 SMKDSQPSLEKPVSYVDEPIL 146
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.9 bits (64), Expect = 1.2
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 442 IRLDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGIDTSRFN------ESMVASN 495
IRL E LE L +K DLNE L E+E L K+ T + E + S
Sbjct: 499 IRLQEVTKELET-LRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSY 557
Query: 496 ECNDVNNKVTLDQSKNNHIQFHSTHFDIRSSPIKPTSTVFRKFQITPDKLSNYDGQIIGA 555
E N T+D+ +N T+ ++ ++ + R+F + +KL + + ++
Sbjct: 558 EVNVSELNGTIDEYRNKLKDKEETYNEVMNA-FQYKDNDLRRFHESINKLQDREKELTSN 616
Query: 556 V---NMVDKAFEET 566
+ N+V + ET
Sbjct: 617 LEKKNLVISSLRET 630
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 22 NPNDSQANYIITLGDVEQKPISDNLKSFYEKSGSIENSIPNV 63
+P++ +Y + L DV Q + D+LK Y + +NS NV
Sbjct: 1388 SPSEHTQSYNLNLLDVLQHTLRDSLKDIYTLNTGADNSSDNV 1429
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 45 NLKSFYEKSGSIENSIPNVIKAPAPRTIKKIDPAAVGNNLKLASFL-LPKTEPSKPYVLN 103
N K ++K S+ +SIP + +PAP ++ + ++V + S + + +P+KP L
Sbjct: 959 NTKQSFDKKSSLIDSIPAL--SPAPSSLAR---SSVSSQRSSTSIIPIKPNKPTKPDHLV 1013
Query: 104 NVILKPSLPAVSNTRKINLQSTEQKTPNTIP 134
+KP LP S + + + TP +P
Sbjct: 1014 APRVKPLLPPRSGSSSSGVPA-PNLTPVNVP 1043
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 578 ELPCKENAIDQSWILSSDKSEDGFTKPDSLIEPSLIHVKDTDTNKVSSTRSNISDVTQDI 637
+ C N+++ + +S KS++ P+ L L+H+ D N +S R+ + + I
Sbjct: 996 DFSCAYNSVEDLYAFTSMKSKE--ILPEVLWIMLLVHLADLCENSWASVRNGAAQILFRI 1053
Query: 638 LTNVCSE 644
+ CS+
Sbjct: 1054 FNSQCSK 1060
>SPAC29E6.05c ||SPAC30.09c|peptide methionine sulfoxide reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 372 FCMHNPSTTQNQSN-VEVNQPSELLITNHEEAMI 404
F MH+P+T+ Q N + S + TN E+A I
Sbjct: 78 FAMHDPTTSNQQGNDIGTQYRSAIFTTNPEQATI 111
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 171 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 223
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 224 IYSGTTPFNTTLASATDT 241
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 243 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 295
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 296 IYSGTTPFNTTLASATDT 313
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 315 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 367
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 368 IYSGTTPFNTTLASATDT 385
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 387 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 439
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 440 IYSGTTPFNTTLASATDT 457
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 459 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 511
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 512 IYSGTTPFNTTLASATDT 529
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 610 PSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLSYPGME 669
P + V + + V++T + TQ+ T + + S + +D+ T +
Sbjct: 531 PGTVEVVEPEAGTVTTT---VYSGTQEYTTTLATASGTVSGTVEVVDTAAGTVTT----T 583
Query: 670 IRSGTSDFNLDLFSFTNT 687
I SGT+ FN L S T+T
Sbjct: 584 IYSGTTPFNTTLASATDT 601
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 586 IDQSWILSSDKSEDGFTKPDSLIEPSLIHVKD--TDTNKVSSTRSNISDVTQDILTNVCS 643
+D +L +D+ E + S I P I D TD + + ++ S+ ++ LT+
Sbjct: 138 VDLDTLLDNDQPEKNESNTASTIRPPWIGNNDHATDKENLLESDASSSNDSESELTDSAD 197
Query: 644 ESNQSDS 650
N+SDS
Sbjct: 198 NMNESDS 204
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 5 PEATIVDSSQLTPVYLINPNDSQANYIITLGDVEQKPISDNLKSFYEKSGSIENSIPNVI 64
PEA +D++ +T V I+ ++ + ++ L Q+ I + + YE+S + +SIP ++
Sbjct: 698 PEADYLDAALMT-VMQIHLSEGPGDILVFL--TGQEEIDTSCEILYERSKMLGDSIPELV 754
Query: 65 KAP 67
P
Sbjct: 755 ILP 757
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.5 bits (58), Expect = 6.5
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 568 NINGLINNDIELPCKENAIDQSWILSSDKSEDGFTKPDSLIEPSLIHVKDTDTNKVSSTR 627
N+ ++N ++EL +++ ++ D+S T D+ PS + + D N V
Sbjct: 94 NVTDIVNLNVELEVNGLSLEIE-LVPPDESLSSTTYEDA---PSQLDILD---NVVEYMN 146
Query: 628 SNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCLS 664
S +D + N ES S N LDS+ CL+
Sbjct: 147 KTASQDFEDEVINEGLESEIDGSSHNLLDSILQKCLA 183
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 27.5 bits (58), Expect = 6.5
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 23/141 (16%)
Query: 545 LSNYDGQIIGAVNMVDKAFEETNNINGLINNDIE---------LPCKENAIDQSWILSSD 595
LSN +I AV+ K F ++ IN +I+N++ + C + ++ LSS
Sbjct: 550 LSN-TAALISAVSK-GKRFGDSGYINKVISNEVVDHSIVFVTLIGCDSSKLELILALSSG 607
Query: 596 ------KSEDGFTKPDSLIEPSLIHVKDTDTNKVSSTRSN--ISDVTQDILTNVCSESNQ 647
+S+ F + SL P+ + S +SN + ++QD+ C++S
Sbjct: 608 YFQFCIESDSKFDEGTSLEYPNSDKRILARASLTSGLKSNNTLRALSQDLKN--CAKSKD 665
Query: 648 SDSVLNFLDSLGSTCLSYPGM 668
+ N +SLGS C YP M
Sbjct: 666 DSTTQNLTESLGSVC--YPSM 684
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 47 KSFYEKSGSIENSIPNVIKAPAPRTIKKIDPAAVGNNLKLASFLLPKTEPSKPYVLNNVI 106
+ F + S ++ +I V + + +I ++ K AS L+ ++ Y L+ +
Sbjct: 22 EGFLQSSNDVQKAIDEVHYPDSLNDLSEISKNLYISSWKTASELVSTSDKGIDYTLSAMS 81
Query: 107 LKPSLPAVSNTRKINLQSTEQKTPNTIPVFGIDRKIV 143
+ P+L +V + + LQ + + N + F K +
Sbjct: 82 INPNL-SVPEQQHLWLQIEDSSSQNILQYFEKSNKFI 117
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 45 NLKSFYEKSGSIENSIPNVIKAPAPRTIKKIDPA-AVGNNLKLASFLLPKTEPSKPYVLN 103
N S Y + IP P P+ K+ A G +ASF P ++ ++PY+ +
Sbjct: 18 NNASKYSELPIAYQEIPLQSLPPYPKVASKLKGVVAGGKENNIASFQKPSSKATRPYIPS 77
Query: 104 NVILKPSLP 112
L S+P
Sbjct: 78 YTRLTYSVP 86
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 27.1 bits (57), Expect = 8.6
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 552 IIGAVNMVDKAFEETNNINGLINN--DIELPCKENAI--DQSWILSSDKSEDGFTKPDSL 607
++G + K NI+ ++NN L KE A+ ++S ++ TKP
Sbjct: 305 LLGELLRESKGKSLNTNIDLVLNNAEKASLIAKELAVLKEKSSFFPTNTGNTFETKP--- 361
Query: 608 IEPSLIHVKDTDTNKVSSTRSNISDVTQDILTNVCSESNQSDSVLNFLDSLGSTCL 663
++ + K +D VSS++ I++ T VC S DSVL + L S L
Sbjct: 362 VKQDFFYGKVSDKG-VSSSKKKITETTSKPAEVVCVGSVSIDSVLKLDNPLTSKFL 416
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 373 CMHNPSTTQNQSNVEVNQPSELLITNHEEAMIPD 406
C+H PSTT + NVE + + + E + PD
Sbjct: 389 CLHIPSTTPRERNVETSLHKVVSSLDLSEEISPD 422
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 8.6
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 376 NPSTTQNQSNVEVNQPSELLITNHEEAMIPDTEDC----ARISSAENWPTVNKRVWKLKK 431
N TTQN NVEV S L E+ + + E ++S + +N+ + K
Sbjct: 933 NKDTTQNPDNVEVEAISIELERTKEKLRMAELEKSNIQQKYLASEKTLEMMNETHEQFKH 992
Query: 432 LKAQNSGAKKIRLDE-KHTLLELD--LAVKREEDLNETKRLSFESED 475
L ++ ++ + LL+L+ + V +EE + +K L+ + ED
Sbjct: 993 LVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLED 1039
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 8.6
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 377 PSTTQNQSNVEVNQPSELLITNHE--EAMIPDT--EDCARISSAENWP---TVNKRVWKL 429
PS+ QN + + S ++N E E +I + +SS +P + + + ++
Sbjct: 233 PSSYQNLPSQSLTGESLPTVSNQEKDEGVIEKVAVNNTPSVSSKSPFPKKKSFSSMLAQV 292
Query: 430 KKLKAQNSGAKKIRLDEKHTLLELDLAV--KREEDLNETKRLSFESEDLLTKLGIDTSRF 487
KK KA+N+G+ L + LEL ++ KR ++ T S L I F
Sbjct: 293 KKEKAENNGSDGYDLQPTKSQLELYQSILRKRANQVSSTSLTKSSSPKPLPSSAIVKFDF 352
Query: 488 NESMVASNECNDVNNKVTLDQSKNNHIQ-FHSTHFDIRSS 526
+E + +N TL +H+ ST F + S
Sbjct: 353 GNGKSIVHEFSKDDNIETLRAFVASHLSPEESTSFQLTFS 392
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,307,228
Number of Sequences: 5004
Number of extensions: 152731
Number of successful extensions: 442
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 429
Number of HSP's gapped (non-prelim): 43
length of query: 687
length of database: 2,362,478
effective HSP length: 78
effective length of query: 609
effective length of database: 1,972,166
effective search space: 1201049094
effective search space used: 1201049094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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