Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001055-TA|BGIBMGA001055-PA|undefined
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 33 0.76
01_01_0689 - 5287110-5287209,5287444-5287691,5287935-5288107,528... 32 1.7
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 31 2.3
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 31 3.1
06_01_0977 + 7585817-7585970,7586057-7586146,7586500-7586702,758... 31 3.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 4.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 4.0
03_06_0412 + 33749039-33749077,33749585-33749728,33750110-337508... 31 4.0
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048... 31 4.0
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 30 7.1
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 30 7.1
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 30 7.1
05_04_0091 + 17839118-17839303,17840876-17840923,17841381-178415... 29 9.3
03_05_0599 - 26012956-26013316,26013444-26013736,26013813-260140... 29 9.3
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 29 9.3
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 33.1 bits (72), Expect = 0.76
Identities = 39/213 (18%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 302 EEDRTNIFIQQLEQLIVKLKSLLPCLLNTMEGNEGKPCTINDDIGRILGMDPGKYNIDVN 361
E + + ++L L+++ + +E + + +N I ++ G +D++
Sbjct: 1314 EAQKAKMEAERLHNLLLEKQVDAEICKKEIEMQKTEIANLNQKISELVENSRG---VDLS 1370
Query: 362 ALSCIKDKDGFCMHNPSTTQNQSNVEVNQPSELLITNHEEAMIPDTEDCARISSAENWPT 421
+KD+ + N T +++ E+ + +LL + ++++I + E+ +E
Sbjct: 1371 TYETMKDE----LQNIKATLRENSAELERTKKLL--SEKDSVIRNLEEKLAGCQSELDAR 1424
Query: 422 VNKRVWKLKKLKAQNSGAKKIRLDEKHTLLELDLAVKREEDLNETKR-LSFESEDLLTKL 480
K LK++ +KI ++ K +LD + K +E+L + K+ LS + EDL +
Sbjct: 1425 EKKLNDVEASLKSEIDRHRKININIKR---KLDASAKEKEELTKEKQSLSKQLEDLKSSQ 1481
Query: 481 GIDTSRFNESMVASNECNDVNNKVTLDQSKNNH 513
T NE + + + L++ ++++
Sbjct: 1482 KTTTENSNEQAIKEKDFRIQTLEKVLEKERDDN 1514
>01_01_0689 -
5287110-5287209,5287444-5287691,5287935-5288107,
5288913-5289060,5289537-5289696,5290021-5290166,
5290963-5291191,5291901-5292123,5292253-5292401,
5293501-5293670,5294188-5294259,5294363-5294443,
5296180-5296311,5296381-5296468,5296841-5297054,
5297501-5297684,5298069-5298152,5299002-5299131,
5299280-5299650,5299684-5299967,5300932-5301247
Length = 1233
Score = 31.9 bits (69), Expect = 1.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 373 CMHNPSTTQNQSNVEVNQPSELLITNHEEAMIP 405
C H S +QNQ +EV P++ +I + AM P
Sbjct: 178 CGHTSSVSQNQGCIEVGTPTQAMIDSPARAMAP 210
>04_04_1354 -
32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 31.5 bits (68), Expect = 2.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 255 DEPELPAVEFASLYRLQKHYENHPTHIPAKIHSNLFHC 292
D +LP V+FA+L+R++ ++ HP + I S++ C
Sbjct: 631 DIDDLPKVDFANLHRVELKFDVHPINRETTITSDVLIC 668
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 31.1 bits (67), Expect = 3.1
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 34 LGDVEQKPISDNLKSFYEKSGSIENSIPNVIKAPAPRTIKKIDPAAV---GNNLKLASFL 90
L V+ K + N SG NS N +PA T + + PA V GN+LKL +
Sbjct: 857 LSYVQLKEMMLNNAKIANTSGVFSNSNTNYSPSPALST-QAVPPAKVVQNGNSLKLPT-- 913
Query: 91 LPKTEPSKPYVLNNVILKPSLPAVSNTRKINLQSTEQKTP 130
LPK P+ K + N ++I+ + + +TP
Sbjct: 914 LPKLNPAAQRSNPTESNKAEVEQADNLKEISTKVSPAQTP 953
>06_01_0977 +
7585817-7585970,7586057-7586146,7586500-7586702,
7587274-7587452,7587913-7587991,7588403-7588537,
7588651-7588800,7588887-7588997,7589084-7590004,
7590351-7590623,7590853-7591062,7591425-7591573,
7591716-7592052
Length = 996
Score = 31.1 bits (67), Expect = 3.1
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 309 FIQQLEQLIVKLKSLLPCLLNTMEGNEGKPCTINDDIGRILGMDPGKYNIDVNA-----L 363
F+Q LE+ L LL L++ N GKPC D+ L D + +++ A
Sbjct: 460 FVQTLERGEKLLDELLDEALSSAGNNGGKPCLSGKDV--FLLYDTYGFPVEITAEISGER 517
Query: 364 SCIKDKDGFCMHNPSTTQNQSNVEVNQPSELLITNHEEAM--IPDTE 408
I D GF M Q + + + +L + N E + IPDTE
Sbjct: 518 GVIVDMKGFDME--MENQRKQSQAAHNVVKLSVGNETEIVKSIPDTE 562
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 4.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 431 KLKAQNSGAKKIRLDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGIDTSRFNES 490
K K + + K + K L+ +L V+ E + K L +E DL+ KL + ES
Sbjct: 220 KSKEEEAAIKDAEVQRKLKKLK-ELEVEVVELRRKNKELLYEKRDLIVKLDAAQGKITES 278
Query: 491 MVASNECNDVN 501
V S+ ++N
Sbjct: 279 DVVSHAREEIN 289
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 4.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 431 KLKAQNSGAKKIRLDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGIDTSRFNES 490
K K + + K + K L+ +L V+ E + K L +E DL+ KL + ES
Sbjct: 525 KSKEEEAAIKDAEVQRKLKKLK-ELEVEVVELRRKNKELLYEKRDLIVKLDAAQGKITES 583
Query: 491 MVASNECNDVN 501
V S+ ++N
Sbjct: 584 DVVSHAREEIN 594
>03_06_0412 +
33749039-33749077,33749585-33749728,33750110-33750862,
33750959-33751778,33751893-33752140,33752285-33752391,
33753098-33753248,33753339-33753530,33753905-33754042
Length = 863
Score = 30.7 bits (66), Expect = 4.0
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 592 LSSDK-SEDGFTKPDSLIEPSLIHVKDTDTNKVSSTRSN-ISDVT-QDILTNVCSESNQS 648
LS D+ + G T + + P +H+ T+K+SST++N ++ VT +D+L C +
Sbjct: 45 LSGDEGTPTGTTPSNGNVVPFSLHLSSESTSKLSSTQANGLNSVTCKDVLGGFCIDDQAQ 104
Query: 649 D 649
+
Sbjct: 105 E 105
>02_05_0897 +
32603060-32603387,32604348-32604589,32604681-32604824,
32604889-32605050,32605129-32605212,32605528-32605601,
32605850-32606039,32606120-32606275,32606368-32606465,
32606976-32607102,32607193-32607292,32607402-32607572,
32607790-32607838,32607912-32608003,32608705-32608774,
32608999-32609023,32609059-32609293,32609425-32609525,
32609614-32609865
Length = 899
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 309 FIQQLEQLIVKLKSLLPCLLNTMEGNEGKPC 339
++++ E V ++S LP LLNT+ NEG C
Sbjct: 389 YVEKAEDATVHIRSKLPGLLNTLVFNEGDLC 419
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 29.9 bits (64), Expect = 7.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 427 WKLKKLKAQNSGAKKIRLDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGID-TS 485
W L +L A+ +K +L+ + R ED KR + L +L +D T+
Sbjct: 426 WTLARLNAEEVSKAAAEAKKKSKVLQ---PIARHEDPKHDKRRPDKRGQFLPELSVDHTT 482
Query: 486 RFNESMVASNECNDVN 501
R ++S SN C+D++
Sbjct: 483 RTSDSCTDSN-CSDMD 497
>03_06_0030 +
31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 29.9 bits (64), Expect = 7.1
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 6 EATIVDSS-QLTPVYLINPNDSQANYIITLGDVEQKPISDNLKSFYEKSGSIENSIPNVI 64
E ++D Q++ +++ P S AN +++ V+ + S+N ++GSI + +
Sbjct: 362 EKQLIDKGKQVSSIHVFTPRYSDANPQMSMKGVDGRSASNNQFFHQGQNGSIGWFARSPL 421
Query: 65 KAPAPRTIKKIDPAAVGNNLKLA-SFLLPKTE-PSKPYVLNNVILKPSLPAVSN 116
+APA ++D + + LA +P+ + PS + + + P A++N
Sbjct: 422 EAPAINNFPRLDRSHNSSLGALAPPMSIPRIDHPSGASPIGSCTVDPRSSAINN 475
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 370 DGFCMHNPSTTQNQSNVEVNQPSELLITNHEEAMIPDTEDCARISS 415
DG + +P+ + N + V S++LITN ++ + +DC I +
Sbjct: 276 DGLSISSPALSPNTDGIHVENTSDVLITN---TVVSNGDDCVSIGA 318
>05_04_0091 +
17839118-17839303,17840876-17840923,17841381-17841526,
17841616-17841664,17842260-17842316,17842460-17842627,
17842950-17843011,17843103-17843190,17843277-17843388,
17843472-17843548,17843622-17843759,17844424-17844588,
17844667-17844780,17845026-17845122,17845242-17845390
Length = 551
Score = 29.5 bits (63), Expect = 9.3
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 584 NAIDQSWILSSDKSEDGFTKPDSLIEPSLIHVKDTDTNKVSSTRSNISDVTQDILTNVC- 642
N+++ SWI + S +I+P + + D DT ++ ++ QD L C
Sbjct: 104 NSLEPSWITKATISYQF-----EIIQPLVFKIYDIDTRYHNTPVKTLNLAQQDFLGEACC 158
Query: 643 --SE--SNQSDSVLNFLDSLGSTCL 663
SE +N LN DS G T L
Sbjct: 159 NLSEIVTNNHSLTLNLRDSCGHTLL 183
>03_05_0599 -
26012956-26013316,26013444-26013736,26013813-26014040,
26014666-26014897,26015392-26015475,26015562-26015623,
26016263-26016367,26016458-26016481
Length = 462
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 383 QSNVEVNQPSELLITNHEEAMIPDTEDCARISSAENWPTVNKRVWKLKKLKAQNSGAKKI 442
QS +++ Q E +I+ +E E A + A W T + K ++ +A A
Sbjct: 241 QSMLKLRQSEEKVISLSKEKDQLLKERDAALQEAHMWRT---ELGKARE-QAVIQEATIA 296
Query: 443 RLDEKHTLLELDLAVKREEDLNETKRLSFESEDLLTKLGIDTSRFNESMVASNE 496
R DEK E D A + +E + + E E+LL+ +GI S+ ++ +
Sbjct: 297 RADEKVRASEADAAARIKEAAEKLHAVEKEKEELLSLVGILQSQVQREQSSTKQ 350
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 298 KGGSEEDRTNI--FIQQLEQLIVKL---KSLLPCLLNTMEGNEGKPCTINDD 344
+ +EE+ NI ++ +L++ + KL K LL C + +E NEGK + +D
Sbjct: 698 QNAAEENVRNIRAYVTELKERVAKLQYQKQLLVCQVLELESNEGKTNDMEED 749
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,874,220
Number of Sequences: 37544
Number of extensions: 796281
Number of successful extensions: 1507
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1502
Number of HSP's gapped (non-prelim): 18
length of query: 687
length of database: 14,793,348
effective HSP length: 87
effective length of query: 600
effective length of database: 11,527,020
effective search space: 6916212000
effective search space used: 6916212000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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