Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001054-TA|BGIBMGA001054-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
         (392 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   5.0  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock
          protein 70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 59 DLFYSIATQKKKVGSIAPKKFIARLRKEKEE 89
          D F  +  QK K    A KK + +LR+E E+
Sbjct: 66 DYFIKMVKQKHKKDIRADKKALQKLRREVEK 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 340  IVKSHGFWLLFDDDMVDKIDA 360
            I+K H  W  FD+   +K+ A
Sbjct: 1868 IIKPHDTWADFDNKFYEKVTA 1888


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.135    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,443
Number of Sequences: 317
Number of extensions: 3868
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 392
length of database: 114,650
effective HSP length: 58
effective length of query: 334
effective length of database: 96,264
effective search space: 32152176
effective search space used: 32152176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)