Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001054-TA|BGIBMGA001054-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(392 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 203 3e-53
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 93 6e-20
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 91 2e-19
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 88 2e-18
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 83 5e-17
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 77 6e-15
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 60 7e-10
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 51 3e-07
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 48 2e-06
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 46 7e-06
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 44 4e-05
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 37 0.004
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 36 0.007
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 30 0.65
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 28 2.0
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 27 3.4
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 26 8.0
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 203 bits (496), Expect = 3e-53
Identities = 103/219 (47%), Positives = 138/219 (63%), Gaps = 19/219 (8%)
Query: 50 KETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI 109
KE + TCL DL+ S++ + G +P++FI LR++ E F + QQDAHEF NFL+N +
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSV 210
Query: 110 NEIILAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVS 169
E TL N + V H P WVH +F+GTLTSET+CL CE ++
Sbjct: 211 TE---------TLDEYYGNHSD-------VMH---PKWVHSLFEGTLTSETKCLTCENIT 251
Query: 170 SKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPL 229
S+DE F DL +D+ +TS+T CL+ FS +E L + NKF CD C S QEA+KRM++KKLP
Sbjct: 252 SRDESFLDLSIDIENHTSVTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPK 311
Query: 230 ILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTKRD 268
IL+LHLKRFKY E H K+ + +VF E+RLF T D
Sbjct: 312 ILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTED 350
Score = 75.8 bits (178), Expect = 1e-14
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 309 SDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSHGF-WLLFDDDMVDKIDASAIEDFY 367
++DA N +R+Y L +V+VH G GP+RGHY+SIV++ + W+LFDD+ V ++ + ++ F+
Sbjct: 348 TEDAENAERMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFF 407
Query: 368 GLTSDIQKSSETGYILFYQSRD 389
G Q T Y+LFY + D
Sbjct: 408 G----DQPGQATAYVLFYTAAD 425
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLEY 42
+GNTCY +SVL +LY +PFR+ + Y
Sbjct: 46 YGNTCYVSSVLVSLYHLKPFRDSLNSY 72
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 93.1 bits (221), Expect = 6e-20
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKK---KVGS 73
GNTC+ NSVLQ + P + +L + + C + + A K + +
Sbjct: 131 GNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVARAYPNKGTKRASA 190
Query: 74 IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENV 133
P + L+ F Y Q+DAHEF+ +L++ +S L+ KN
Sbjct: 191 FKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVD--------AWQKSCLQNHKN------ 236
Query: 134 TCNGSVPH-NTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCL 192
+ H + E + VH IF G L + C C+ S+ + DL VD + +S+ L
Sbjct: 237 -----LDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDA-KGSSLADSL 290
Query: 193 KCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSH 252
K F E L NK++C+NC +A K+M + + P IL +H KRF + F + K+S
Sbjct: 291 KHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTF-NGF-QSSKISK 348
Query: 253 RVVFPLELRL 262
++ +P L
Sbjct: 349 QISYPESFNL 358
Score = 46.4 bits (105), Expect = 7e-06
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVK-SHGFWLLFDDDMV 355
Y+L+ V+VH G GHY S K S+G WL FDDD V
Sbjct: 371 YELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFV 408
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 91.5 bits (217), Expect = 2e-19
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 32/246 (13%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
G TCY NS+LQ+L+F FR+ V + N +++++ L +FY++ Q++ V +
Sbjct: 236 GATCYMNSLLQSLFFTNIFRKTVYKIPTDNDDSRDSVAYALQRVFYNLEKQREPVSTTEL 295
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
+ FD++MQ D EF L +++ K K EN
Sbjct: 296 TRSFGW-----NSFDSFMQHDIQEFNRVLQDNLE------------KKMKGTEVENA--- 335
Query: 137 GSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFS 196
+++IF G + S +C++ SS+ E F+D+Q++V ++ +
Sbjct: 336 -----------LNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLEDSFRDAI 384
Query: 197 DTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVF 256
ETL DNK+ + Q+A K + + LP +L L LKRF Y + +K++ R F
Sbjct: 385 QVETLTGDNKYYAEG-HGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEF 443
Query: 257 PLELRL 262
PLE+ L
Sbjct: 444 PLEIDL 449
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 87.8 bits (208), Expect = 2e-18
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 32/243 (13%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
G TCY NS+LQ+LY FR V + + + K+++ L FY++ + V +
Sbjct: 219 GATCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKDSIAYALQRCFYNLQFMNEPVSTTEL 278
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
K + D++MQ D EF L +++ ER+ KV EN N
Sbjct: 279 TKSFGW-----DSLDSFMQHDVQEFNRVLQDNL------ERSMRDTKV------ENALTN 321
Query: 137 GSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFS 196
+F G + S C+N S++ E ++D+Q++V ++ + +
Sbjct: 322 --------------LFVGKMKSYIACVNVNFESARSEDYWDIQLNVKGMKNLEDSFRSYI 367
Query: 197 DTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVF 256
ETL DN + D +QEA+K + + P IL L LKRF+Y + + IK++ R F
Sbjct: 368 QVETLEGDNCYFADTYG-FQEAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYEF 426
Query: 257 PLE 259
PLE
Sbjct: 427 PLE 429
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 83.4 bits (197), Expect = 5e-17
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 25/245 (10%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKA--KNKRTKETLLTC--LADLFYSIATQ---KK 69
GNTCY N VLQ L+ C+ +L+ + +N TK L T + F+S+
Sbjct: 78 GNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITSAFFSLLQSVLLNH 137
Query: 70 KVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS 129
SI+P+ F+ ++ +F Q DA EFLNF ++ ++E + + ++S +
Sbjct: 138 GQRSISPRNFLEIVQSLNRDFSIDGQCDAQEFLNFFLDKLHEDLNSNASRSPIAPLTE-- 195
Query: 130 GENVTCNGSVP--HNTEPTW----------VHEIFQGTLTSETRCLNCETVSSKDEHFFD 177
+ ++ +P H + W V F G L S T+C+ C S+ F
Sbjct: 196 -DQLSAREELPLSHFSHIEWNLHLRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTS 254
Query: 178 LQV---DVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALH 234
L + DV S+ CL FS E L + + C C + A+K + + KLP L +
Sbjct: 255 LAIPIDDVSHVVSLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQ 314
Query: 235 LKRFK 239
++RFK
Sbjct: 315 IQRFK 319
Score = 36.3 bits (80), Expect = 0.007
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSSE 378
Y+L A + H G N GHYIS V + W DD +V + G+T D+++
Sbjct: 359 YNLFAFICHYGQLEN-GHYISDVLFNNEWCHIDDSIVRTVG--------GIT-DLREDFS 408
Query: 379 TGYILFYQ 386
+ YILFY+
Sbjct: 409 SSYILFYK 416
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 76.6 bits (180), Expect = 6e-15
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 3 ICQDFGLNFQHRMFGNTCYSNSVLQALYFCRPFREKVLE-YKAKNKRTKETLLTC-LADL 60
+C GL + G TC+ + +LQ++ R + + T +TC + D+
Sbjct: 138 VCATAGLRGIQNL-GATCFMSVILQSILHNPLVRNLFFSGFHTSTDCKRPTCMTCAIDDM 196
Query: 61 FYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS 120
F SI K K P + + K + Y QQD HEF +L++ ++
Sbjct: 197 FSSIYNSKNKSTFYGPTAVLNLMWKLSKSLCGYSQQDGHEFFVYLLDQMHT--------- 247
Query: 121 TLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQV 180
++ G ++ C T P +H IF G+L + CL+C+ + D+ +
Sbjct: 248 -----ESGGGTSMPC-------TCP--IHRIFSGSLKNVVTCLDCKKERVAVDPLMDISL 293
Query: 181 DVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKY 240
D+ + T + CL+ F E + ++ C +C S + A K++ KLP + + LKRF+
Sbjct: 294 DINEPT-LQGCLERFVSKEKV----QYSCHSCGS-KNAIKQLVFDKLPPTICMQLKRFE- 346
Query: 241 MEQFNRHIKVSHRVVFPLELRL-FNTKRD 268
F K+ +V +P LR+ +N +D
Sbjct: 347 QNNFAMSTKIDKQVSYPAFLRMRYNFNQD 375
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAI 363
Y L +VV H G+ + GHYI+ W L DD + ++ S +
Sbjct: 379 YQLYSVVCHKGT-LDTGHYIAYTYYQNQWFLLDDTTIVEVKESEV 422
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 59.7 bits (138), Expect = 7e-10
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC---LADLFYSI--ATQKKKV 71
GNTCY NS LQ L R R+ + KN+ + L +A +F S+ + +
Sbjct: 317 GNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLGMGGQVASIFASLIKSLYSPEH 376
Query: 72 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGE 131
S AP++F A + K F Y QQD+ EFL FL++ ++E + N+ K +
Sbjct: 377 SSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLHE----DLNRIYQKPYTSKPDL 432
Query: 132 NVTCNGSVPHNTEPTW----------VHEIFQGTLTSETRCLNCETVSSKDEHFFDL 178
+ + E W + ++FQG S C C TVS + F DL
Sbjct: 433 YEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPVCNTVSITFDPFMDL 489
Score = 50.8 bits (116), Expect = 3e-07
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 187 SITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNR 246
++ CL F TE L ++ + C C +++A K+M + + P IL HLKRF +F
Sbjct: 826 TLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFRD 885
Query: 247 HIKVSHRVVFPLE 259
K+ V FP++
Sbjct: 886 --KIDDLVEFPID 896
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 50.8 bits (116), Expect = 3e-07
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 310 DDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVK---SHGFWLLFDDDMVDKIDASAIEDF 366
D+ NP LYDLV V+ H G+ + GHY + ++ + W F+D V + A IE
Sbjct: 388 DEGANPTGLYDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKVSIVPAEKIE-- 445
Query: 367 YGLTSDIQKSSETGYILFYQSRD 389
T D +++ YIL Y+++D
Sbjct: 446 ---TLDGGGEADSAYILLYKAKD 465
Score = 38.3 bits (85), Expect = 0.002
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
GNTCY NS +Q L + V ++ + E + ++ + + P
Sbjct: 106 GNTCYMNSTVQMLRAIPELSDAVSQFNSSGGLVAE---------YRTLLNSMQSNAPVTP 156
Query: 77 KKFIARLRKEKEEF-------DNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS 129
+F+ LR E +F Y QQDA E +FL++ + +R+ S+ VQKN +
Sbjct: 157 MRFLQSLRMEYPQFAEMSRETGGYAQQDAEECWSFLLS------VLQRSLSSEWVQKNMA 210
Query: 130 GE 131
G+
Sbjct: 211 GK 212
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 220 KRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLEL 260
K R+ +LP L ++ RF + + K+ +V FP EL
Sbjct: 276 KISRISRLPNYLTVNFVRFYWKASIGKKAKILRKVKFPFEL 316
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 48.0 bits (109), Expect = 2e-06
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 17 GNTCYSNSVLQALYFCRPFR------EKVLEYKAKNKRTKETLLTCLADLFYSIATQKKK 70
GN C+ NS+LQAL +C PF +++ Y + LT L+ F + +
Sbjct: 139 GNICFMNSILQALMYCVPFYNLLKQINRMVPYNFERTTPLIESLTMLSRDFREYSEKFDL 198
Query: 71 VG-SIAPKKFIARLRKEK--EEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKN 127
G SI P+ + + E Q+DA EFLN ++ ++E + ER LK +
Sbjct: 199 QGDSILPEVVYSATKGNPRFEMLQTGEQEDAEEFLNLFLDELHEEFVRERRHYLLKNDER 258
Query: 128 NSGENVTCNGSV 139
N ++ + +
Sbjct: 259 NPKSDIKISNGI 270
Score = 33.9 bits (74), Expect = 0.040
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 312 AVNPDRLYDLVAVVVHCGSGPNRGHYISIVK--SHGFWLLFDDDMVDKIDASAIEDFYGL 369
+++P+ YDL AVV H G+ + GHY V+ W DD + ++ +E+ L
Sbjct: 431 SIHPE--YDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVEN-SEL 487
Query: 370 TSD-----IQKSSETGYILFYQSR 388
++D + Y+LFY R
Sbjct: 488 SADPSLSKLGHGDRVAYLLFYTRR 511
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 46.4 bits (105), Expect = 7e-06
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 184 QNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFK-YME 242
++ ++ CL FS E L + + C C +++ A KR+ + +LP IL +HL RF +
Sbjct: 688 ESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGG 747
Query: 243 QFNRHIKVSHRVVFPL 258
R K VV+P+
Sbjct: 748 DLRRRRKRRDLVVYPV 763
Score = 38.7 bits (86), Expect = 0.001
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 1 MSICQDFGLNFQHRMFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADL 60
++I ++ GL + + GN+CY NS LQ + + L + L + +
Sbjct: 270 LTINKEIGLCGLYNL-GNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPLGMMGKV 328
Query: 61 FYSIATQKKKVG------SIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINE 111
S A+ K + S++P F + + F Y QQD+ EF+ F ++ ++E
Sbjct: 329 ALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHE 385
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 44.0 bits (99), Expect = 4e-05
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKN------KRTKETLLTCLADLFYSIATQKKK 70
G TC+ NS LQ L C + + ++ + K TK + L+ + T K
Sbjct: 214 GATCFFNSTLQVLCACEALHDVISPFQYSHSSVIVRKLTKSPESSLLSAFIKFLETFYKS 273
Query: 71 VGSIA---PKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI 109
G+I+ P F R+ +F +QQDAHE L L++ +
Sbjct: 274 DGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLDDL 315
Score = 31.1 bits (67), Expect = 0.28
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 187 SITHCLKCFSDTETLCNDNKFKCDNC 212
++ CLK F+ E L +N F C+NC
Sbjct: 675 TLIDCLKNFTHVEELSGENMFACENC 700
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVKSHGF 346
Y L V+VH G+ N GHY++ V SH F
Sbjct: 796 YRLFGVIVHSGT-LNYGHYVAYVLSHKF 822
Score = 29.5 bits (63), Expect = 0.85
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 201 LCNDNKFKCDNCSSYQEAQKRMRVKK-LPLILALHLKRF 238
L +DN N S Y+ A KRM + LP + +HLKRF
Sbjct: 715 LTSDNDKYSFNNSVYRNAYKRMLLDDPLPPVFIIHLKRF 753
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 117 RNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFF 176
R+ L++ + +S + + ++ + + IF G LTS C +C +++ E
Sbjct: 492 RSLDILRLGELSSDDMMLDKATMDEFSSSLVIKSIFTGRLTSVVMCQSCNEITNTPEPIQ 551
Query: 177 DLQVDV 182
DL + +
Sbjct: 552 DLSIPI 557
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 37.1 bits (82), Expect = 0.004
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 43/263 (16%)
Query: 13 HRMFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 72
+ + GN C+ N VLQ+L +E +LE K + + TL L +L +
Sbjct: 52 YNVSGNDCFLNCVLQSL----ASQESLLEI-LKLRCSSSTLYATLYELLQKL--NSGPGN 104
Query: 73 SIAPKKFIARLR-KEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGE 131
I P F+ L ++ +QQDA EFL L+ TL++QK ++ +
Sbjct: 105 PITPGSFLNSLEIATNKKLVRSIQQDAQEFLQHLV-------------ETLELQKPHTYK 151
Query: 132 NVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQV----DVGQNTS 187
S P V F GT+ + +C C +S +Q+ + N++
Sbjct: 152 WSKVL-SFP-------VDSPFIGTMEQKVQCCQCLAISISYSTATSIQLCLPPEYSGNSN 203
Query: 188 ITHCLKCFSDTETLCNDNKFKCDNC--SSYQEAQ----KRMRVKKLPLILALHLKRFKYM 241
++ +D E +D +KCD+C SS + ++ + + K P IL + L+R Y
Sbjct: 204 VSLLSLMEADREQHISD--YKCDSCFKSSPKHSKTSCIRTVDWKNPPTILQIQLERTSYT 261
Query: 242 EQFNRHIKVSHRVVFPLELRLFN 264
Q VS + FP +L L N
Sbjct: 262 CQGLTRNNVS--ISFPSKLILKN 282
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 303 EKKNRKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSH----GFWLLFDDDMVDKI 358
+ +N S ++ N Y+L A++ H GS + GHY++ ++ W+LF+D+ V ++
Sbjct: 697 KNENMGSWESTNVPVNYNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQV 756
Query: 359 DASAIEDFYGLTSDIQKSSETGYILFYQSRD 389
+ ++++ TGY+ ++ D
Sbjct: 757 ------------ASLEEAKTTGYVYLFERLD 775
Score = 29.9 bits (64), Expect = 0.65
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLE-YKAKNK--RTKETLLTC----LADLFYSIATQK- 68
GN+CY S +Q+L+ + F L + N +T T L C LAD S K
Sbjct: 306 GNSCYLASTMQSLFSIKEFAIHELNLFNTYNSVCQTPTTDLQCQLGKLADGLVSGKFSKP 365
Query: 69 KKVG-------SIAP-----KKFIAR--LRKEKEEFDNYMQQDAHEFLNFLINHINEIIL 114
K+G SI P + F+ + + + EF QQDA+EFL +L+ I + +
Sbjct: 366 SKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLLGKIRKSSI 425
Query: 115 AE 116
A+
Sbjct: 426 AK 427
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 29.9 bits (64), Expect = 0.65
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLE 41
GN CY NS++Q + +P R +L+
Sbjct: 620 GNLCYLNSLIQYYFIIKPLRNAILD 644
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 195 FSDTETLCN--DNKFKCDNCSSYQE-AQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVS 251
F + +TL + D F+ N E AQ+ + + +LP+IL L ++R ++ + K +
Sbjct: 879 FEEKQTLYDALDGVFETVNIDMGSETAQRSLCITELPIILQLQIQRVQFDRTTGQPFKSN 938
Query: 252 HRVVFPLELRL 262
V F EL +
Sbjct: 939 AFVEFGKELSM 949
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 183 GQNTSITHCLKCFSDTETLCNDNKFKCDNCSS----YQEAQKRMRVKK--LPLILALHLK 236
G N I S +T +D ++CD C + + + ++ +R+ + P + LK
Sbjct: 449 GCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCEC-LK 507
Query: 237 RFKYMEQFNRH 247
RF ++ NRH
Sbjct: 508 RFNRLDALNRH 518
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 202 CNDNKFKCDNCSSYQEA---QKRMRVKK 226
CN KC NC Y E KR RVKK
Sbjct: 21 CNGELPKCQNCVVYSETCKYNKRKRVKK 48
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 36 REKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQ 95
REK + + + KR E L L + + KK+ ++ + E+EE D M
Sbjct: 97 REKEILRQQRQKRKSE-----LTQLSQKVKEKFKKMRKKPARRIVTIANDEEEEDDQTMD 151
Query: 96 QDAHE 100
+DA E
Sbjct: 152 EDAFE 156
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,807,484
Number of Sequences: 5004
Number of extensions: 75690
Number of successful extensions: 271
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 217
Number of HSP's gapped (non-prelim): 42
length of query: 392
length of database: 2,362,478
effective HSP length: 74
effective length of query: 318
effective length of database: 1,992,182
effective search space: 633513876
effective search space used: 633513876
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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