GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001054-TA|BGIBMGA001054-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
         (392 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   3.6  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    25   3.6  
AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.          24   8.3  
AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.          24   8.3  
AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.          24   8.3  
AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.          24   8.3  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 184 QNTSITHCLKCFSDTETLCNDNKFKCDNCSSY 215
           +N    HC +C      L  +NKF C  C  Y
Sbjct: 469 ENVEGRHCRECRLGYFNLDAENKFGCTPCFCY 500


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 310 DDAVNPDRLYDLVAVVVHCG---SGPNRGHYISIVK 342
           DD  +P + + + A +VH G   +GP + H I++++
Sbjct: 193 DDCADPPQNFGIEAQIVHPGYDKNGPYQHHDIALIR 228


>AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 302 KEKKNRKSDDAVNPDRLYDLVAVVV 326
           +EK N K  D ++PD L +L  +V+
Sbjct: 144 EEKTNNKIKDLISPDALDELSRMVL 168


>AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.
          Length = 380

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 302 KEKKNRKSDDAVNPDRLYDLVAVVV 326
           +EK N K  D ++PD L +L  +V+
Sbjct: 144 EEKTNNKIKDLISPDALDELSRMVL 168


>AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 302 KEKKNRKSDDAVNPDRLYDLVAVVV 326
           +EK N K  D ++PD L +L  +V+
Sbjct: 144 EEKTNNKIKDLISPDALDELSRMVL 168


>AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 302 KEKKNRKSDDAVNPDRLYDLVAVVV 326
           +EK N K  D ++PD L +L  +V+
Sbjct: 144 EEKTNNKIKDLISPDALDELSRMVL 168


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,336
Number of Sequences: 2123
Number of extensions: 15950
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 6
length of query: 392
length of database: 516,269
effective HSP length: 65
effective length of query: 327
effective length of database: 378,274
effective search space: 123695598
effective search space used: 123695598
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)