Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001054-TA|BGIBMGA001054-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(392 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-4|CAB54286.1| 410|Caenorhabditis elegans Hypothetical pr... 331 6e-91
Z29095-5|CAB54287.1| 398|Caenorhabditis elegans Hypothetical pr... 308 5e-84
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AL132902-8|CAC14423.1| 664|Caenorhabditis elegans Hypothetical ... 69 6e-12
Z83236-10|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 67 2e-11
Z81468-2|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 67 2e-11
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 66 3e-11
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 56 3e-08
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 56 3e-08
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 56 3e-08
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 55 1e-07
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 49 7e-06
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 44 1e-04
Z74033-5|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 44 2e-04
Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 43 4e-04
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 43 4e-04
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL032631-12|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 38 0.016
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 36 0.049
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 36 0.049
Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical pr... 34 0.20
U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical pr... 30 3.2
U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016430-9|AAB65374.1| 467|Caenorhabditis elegans Hypothetical ... 29 4.3
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical ... 29 5.7
Z70267-4|CAA94210.1| 314|Caenorhabditis elegans Hypothetical pr... 29 7.5
U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical pr... 29 7.5
>Z29095-4|CAB54286.1| 410|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 410
Score = 331 bits (813), Expect = 6e-91
Identities = 168/286 (58%), Positives = 206/286 (72%), Gaps = 33/286 (11%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRT---KETLLTCLADLFYSIATQKKKVG 72
FGNTCY NSV+QAL+FCRPFREKVL YK K++ K+ L+TCLADLF+SIA+QK++VG
Sbjct: 32 FGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSIASQKRRVG 91
Query: 73 SIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIIL----AERNQS----TLK- 123
+IAPK+FI +L+KE E FDNYMQQDAHEF N+LIN I+E ++ AER ++ TLK
Sbjct: 92 TIAPKRFITKLKKENELFDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKK 151
Query: 124 ---------------------VQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRC 162
+ N G V N + + TW+HEIFQG LT+ETRC
Sbjct: 152 GNVTVNLAPATAGLPRSDEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRC 211
Query: 163 LNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRM 222
L+CETVSSKDE F DL +DV QNTSI+HCL+ FS+TETLC D K+ C+ CSS QEAQKRM
Sbjct: 212 LSCETVSSKDEDFLDLSIDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRM 271
Query: 223 RVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTKRD 268
R+KK P +LALHLKRFK++E NRH K+S+RVVFPLELRLFN D
Sbjct: 272 RIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDD 317
Score = 99.5 bits (237), Expect = 4e-21
Identities = 40/64 (62%), Positives = 56/64 (87%)
Query: 309 SDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDFYG 368
SDDA DR+YDLVA VVHCG+ PNRGHYI++VKS+ FWL+FDDD+V+K++ S++E+F G
Sbjct: 315 SDDAEYGDRMYDLVATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSG 374
Query: 369 LTSD 372
+++D
Sbjct: 375 MSTD 378
>Z29095-5|CAB54287.1| 398|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 398
Score = 308 bits (756), Expect = 5e-84
Identities = 158/277 (57%), Positives = 197/277 (71%), Gaps = 33/277 (11%)
Query: 25 VLQALYFCRPFREKVLEYKAKNKRT---KETLLTCLADLFYSIATQKKKVGSIAPKKFIA 81
++ AL+FCRPFREKVL YK K++ K+ L+TCLADLF+SIA+QK++VG+IAPK+FI
Sbjct: 29 LVNALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFIT 88
Query: 82 RLRKEKEEFDNYMQQDAHEFLNFLINHINEIIL----AERNQS----TLK---------- 123
+L+KE E FDNYMQQDAHEF N+LIN I+E ++ AER ++ TLK
Sbjct: 89 KLKKENELFDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAP 148
Query: 124 ------------VQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSK 171
+ N G V N + + TW+HEIFQG LT+ETRCL+CETVSSK
Sbjct: 149 ATAGLPRSDEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSK 208
Query: 172 DEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLIL 231
DE F DL +DV QNTSI+HCL+ FS+TETLC D K+ C+ CSS QEAQKRMR+KK P +L
Sbjct: 209 DEDFLDLSIDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLL 268
Query: 232 ALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTKRD 268
ALHLKRFK++E NRH K+S+RVVFPLELRLFN D
Sbjct: 269 ALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDD 305
Score = 99.5 bits (237), Expect = 4e-21
Identities = 40/64 (62%), Positives = 56/64 (87%)
Query: 309 SDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDFYG 368
SDDA DR+YDLVA VVHCG+ PNRGHYI++VKS+ FWL+FDDD+V+K++ S++E+F G
Sbjct: 303 SDDAEYGDRMYDLVATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSG 362
Query: 369 LTSD 372
+++D
Sbjct: 363 MSTD 366
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 74.5 bits (175), Expect = 1e-13
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 39/248 (15%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
G TCY NS+LQ+ YF FR V + + ++ + +FY + + V + +
Sbjct: 199 GATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAVETNSL 258
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
+ ++ D + Q D EF L++++ + K S E
Sbjct: 259 TRAFGW-----DKLDAFNQHDVQEFCRVLLDNLETKM------------KGTSEEK---- 297
Query: 137 GSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFS 196
S+P+ +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++
Sbjct: 298 -SIPN---------LFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYT 347
Query: 197 DTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKY--MEQFNRHIKVSHRV 254
+E L ++NK+ + Q A+K ++ +LP IL + L RF+Y +EQ K++ R
Sbjct: 348 TSEILDDENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQYCGVEQ-----KINERF 401
Query: 255 VFPLELRL 262
FP ++ L
Sbjct: 402 SFPEKMNL 409
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 74.5 bits (175), Expect = 1e-13
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 39/248 (15%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
G TCY NS+LQ+ YF FR V + + ++ + +FY + + V + +
Sbjct: 199 GATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAVETNSL 258
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
+ ++ D + Q D EF L++++ + K S E
Sbjct: 259 TRAFGW-----DKLDAFNQHDVQEFCRVLLDNLETKM------------KGTSEEK---- 297
Query: 137 GSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFS 196
S+P+ +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++
Sbjct: 298 -SIPN---------LFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYT 347
Query: 197 DTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKY--MEQFNRHIKVSHRV 254
+E L ++NK+ + Q A+K ++ +LP IL + L RF+Y +EQ K++ R
Sbjct: 348 TSEILDDENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQYCGVEQ-----KINERF 401
Query: 255 VFPLELRL 262
FP ++ L
Sbjct: 402 SFPEKMNL 409
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 74.5 bits (175), Expect = 1e-13
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 39/248 (15%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
G TCY NS+LQ+ YF FR V + + ++ + +FY + + V + +
Sbjct: 199 GATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAVETNSL 258
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
+ ++ D + Q D EF L++++ + K S E
Sbjct: 259 TRAFGW-----DKLDAFNQHDVQEFCRVLLDNLETKM------------KGTSEEK---- 297
Query: 137 GSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFS 196
S+P+ +F+G + S +CL+ + SS+ E F+D+Q++V S+ + ++
Sbjct: 298 -SIPN---------LFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYT 347
Query: 197 DTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKY--MEQFNRHIKVSHRV 254
+E L ++NK+ + Q A+K ++ +LP IL + L RF+Y +EQ K++ R
Sbjct: 348 TSEILDDENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQYCGVEQ-----KINERF 401
Query: 255 VFPLELRL 262
FP ++ L
Sbjct: 402 SFPEKMNL 409
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 74.5 bits (175), Expect = 1e-13
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 148 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQ------NTSITHCLKCFSDTETL 201
+ ++++GT+ CL C S K ++F DL + V S+ L F E L
Sbjct: 204 IQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAVKPFGAIHAYKSVEEALTAFVQPELL 263
Query: 202 CNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFP--LE 259
N++ C+NC S Q+A K +R+ + P +L + LKRF + IK++ ++ FP L+
Sbjct: 264 DGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRFDFDYNTMHRIKLNDKMTFPDVLD 323
Query: 260 LRLFNTKRDRSS 271
L + K RS+
Sbjct: 324 LNDYVNKEKRST 335
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 310 DDAVNP--DRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMVDKIDASAIE- 364
DD V D +Y+L +V+VH G+ GHY + +K+ W +F+D VD IE
Sbjct: 393 DDIVKTSGDNVYELFSVMVHSGNAAG-GHYFAYIKNLDQDRWYVFNDTRVDFATPLEIEK 451
Query: 365 DFYGLTSDIQKSSETGYILFYQSRD 389
F G S +S+ Y+L Y+ D
Sbjct: 452 SFGGHPSGWNQSNTNAYMLMYRRID 476
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 70.9 bits (166), Expect = 1e-12
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCLADLFYSIATQKK 69
FGNTCY N+VLQ L C PF + ++E + + +T + DL +
Sbjct: 187 FGNTCYMNAVLQLLGHCSPFTQYLIELIPPGGWSNCSHDIPKTAIQMALDLRNMYSDFP- 245
Query: 70 KVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEII--LAERNQSTLKVQKN 127
+ ++P K I +R E F+ + QQDA EF+ L++ ++ + +E +++ ++
Sbjct: 246 -LPYLSPWKIITCVRNEMPGFECFQQQDASEFMRNLLDILDRDLKTCSEYHRTNTLIEMG 304
Query: 128 NSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVD-VGQN 185
N + + PH T + IFQG L ++ +C +C S E+F DL + VG+N
Sbjct: 305 NPEMDYAIAMNAPHTK--TAISAIFQGVLENQIQCHSCGFRSRTIENFLDLSIPIVGEN 361
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 157 TSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQ 216
T + C + +D F Q TS+ CL F TL +DN++ C C
Sbjct: 374 TPKAPCTSSNIEDGQDPGFLVHQ-GAFNKTSLESCLDRFFQNSTLQDDNQYSCSKCEVLV 432
Query: 217 EAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLF 263
+A K + +LP ++ + LKRF++ F KV V FPL + F
Sbjct: 433 DATKSTKAHRLPEVIIIQLKRFRH-TMFG-SCKVGKVVEFPLRSQDF 477
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 318 LYDLVAVVVHCGSGPNRGHYISIVK--SHGFWLLFDDDMVDKIDASAI 363
LYDLV VVH G GHY+S + W FDD +V + DA+ +
Sbjct: 488 LYDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFDDMVVTRCDATQV 535
>AL132902-8|CAC14423.1| 664|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 664
Score = 68.9 bits (161), Expect = 6e-12
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 14 RMFGNTCYSNSVLQALYFCRPFREKVL------EYKAKNKRTKETLLTC-LADLFYSIAT 66
R GNTC+ N+VLQAL FRE ++ +Y K K C L D + +
Sbjct: 381 RNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKLLI 440
Query: 67 QKKKVG---SIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLK 123
+ AP +F F + Q D+HEF+ + ++ ++ + R +
Sbjct: 441 SQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHTEMRKCRKLPGMP 500
Query: 124 VQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV- 182
K+ T + + F+GTL S C C S+K + F DL +D+
Sbjct: 501 DDKH------------------TPISKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIP 542
Query: 183 -GQNTS---ITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLP 228
+N S ++ CL F E L K +C C + Q K+M ++KLP
Sbjct: 543 AQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRKLP 592
Score = 45.2 bits (102), Expect = 8e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAI 363
Y L +++VH G G GHYI+ K +G W FDD +V +D + +
Sbjct: 602 YSLQSIIVHIGYGCGSGHYIAFGKRNGRWFQFDDTVVKGVDEAHV 646
>Z83236-10|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 67.3 bits (157), Expect = 2e-11
Identities = 96/393 (24%), Positives = 156/393 (39%), Gaps = 63/393 (16%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQKKKVGS 73
GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ + + + S
Sbjct: 108 GNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKDRALRS 163
Query: 74 ----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS 129
I P I L +F+ + QQDA+E L +++++ I S
Sbjct: 164 KGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRIY-------------GLS 210
Query: 130 GENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKD-EHFFDLQVDVGQNTSI 188
G N+ +F+ + +CL + VS K E L V Q+
Sbjct: 211 GWNI---------------ESLFRIQTETTMKCLESDEVSEKKVERNNQLTCYVNQDVRF 255
Query: 189 THC-LKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRH 247
+K + E N + D + QK ++ +LP L +++ RF Y E +
Sbjct: 256 LQTGIKAGFEEEMTRNSEELNRD-----AKWQKNTQISRLPKYLTVNINRFFYKESTKTN 310
Query: 248 IKVSHRVVFPLELRLFN-TKRDRSSEXXXXXXXXXXXXXXXXXXVITVDVTVKPKKEK-- 304
K+ V FP++L ++ ++ + + V K + +K
Sbjct: 311 AKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKIF 370
Query: 305 ------KNRKSDDA-VNPDRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMV 355
DDA N YDL ++ H G GHY++ ++S G W LFDD+ V
Sbjct: 371 DDGVALPTAFEDDAGSNNSGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHV 430
Query: 356 DKIDASAIEDFYGLTSDIQKSSETGYILFYQSR 388
+D AI L + + Y+L Y++R
Sbjct: 431 TVVDEEAI-----LKTSGGGDWHSAYVLLYEAR 458
>Z81468-2|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 67.3 bits (157), Expect = 2e-11
Identities = 96/393 (24%), Positives = 156/393 (39%), Gaps = 63/393 (16%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQKKKVGS 73
GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ + + + S
Sbjct: 108 GNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKDRALRS 163
Query: 74 ----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS 129
I P I L +F+ + QQDA+E L +++++ I S
Sbjct: 164 KGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRIY-------------GLS 210
Query: 130 GENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKD-EHFFDLQVDVGQNTSI 188
G N+ +F+ + +CL + VS K E L V Q+
Sbjct: 211 GWNI---------------ESLFRIQTETTMKCLESDEVSEKKVERNNQLTCYVNQDVRF 255
Query: 189 THC-LKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRH 247
+K + E N + D + QK ++ +LP L +++ RF Y E +
Sbjct: 256 LQTGIKAGFEEEMTRNSEELNRD-----AKWQKNTQISRLPKYLTVNINRFFYKESTKTN 310
Query: 248 IKVSHRVVFPLELRLFN-TKRDRSSEXXXXXXXXXXXXXXXXXXVITVDVTVKPKKEK-- 304
K+ V FP++L ++ ++ + + V K + +K
Sbjct: 311 AKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKIF 370
Query: 305 ------KNRKSDDA-VNPDRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMV 355
DDA N YDL ++ H G GHY++ ++S G W LFDD+ V
Sbjct: 371 DDGVALPTAFEDDAGSNNSGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHV 430
Query: 356 DKIDASAIEDFYGLTSDIQKSSETGYILFYQSR 388
+D AI L + + Y+L Y++R
Sbjct: 431 TVVDEEAI-----LKTSGGGDWHSAYVLLYEAR 458
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 66.5 bits (155), Expect = 3e-11
Identities = 96/393 (24%), Positives = 156/393 (39%), Gaps = 63/393 (16%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQKKKVGS 73
GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ + + + S
Sbjct: 108 GNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKDRALRS 163
Query: 74 ----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS 129
I P I L +F+ + QQDA+E L +++++ I S
Sbjct: 164 KGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRIY-------------GLS 210
Query: 130 GENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKD-EHFFDLQVDVGQNTSI 188
G N+ +F+ + +CL + VS K E L V Q+
Sbjct: 211 GWNI---------------ESLFRIQTETTMKCLESDEVSEKKVERNNQLTCYVNQDVRF 255
Query: 189 THC-LKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRH 247
+K + E N + D + QK ++ +LP L +++ RF Y E +
Sbjct: 256 LQTGIKAGFEEEMTRNSEELNRD-----AKWQKNTQISRLPKYLTVNINRFFYKESTKTN 310
Query: 248 IKVSHRVVFPLELRLFN-TKRDRSSEXXXXXXXXXXXXXXXXXXVITVDVTVKPKKEK-- 304
K+ V FP++L ++ ++ + + V K + +K
Sbjct: 311 AKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKIF 370
Query: 305 ------KNRKSDDA-VNPDRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMV 355
DDA N YDL ++ H G GHY++ ++S G W LFDD+ V
Sbjct: 371 DDGVALPTAFEDDAGSNNSGFYDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHV 430
Query: 356 DKIDASAIEDFYGLTSDIQKSSETGYILFYQSR 388
+D AI L + + Y+L Y++R
Sbjct: 431 TVVDEEAI-----LKTSGGGDWHSAYVLLYEAR 458
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 60.5 bits (140), Expect = 2e-09
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 14 RMFGNTCYSNSVLQALYFCRPFREKVLE--YKAKNKRTKET-----LLTCLADLFYSIAT 66
R GNTC+ N+VLQ L RE L Y+ + T L AD + + +
Sbjct: 426 RNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMHQMWS 485
Query: 67 QKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQK 126
+K +I P + + ++ +F N+ Q DAHEFL+FL++ ++E + + + +
Sbjct: 486 GHQK--AIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTGTVE 543
Query: 127 NNSGENVTCNGSVPHN---TEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVG 183
++ ++ + N + ++F G L S +C NC+ VS + F L V
Sbjct: 544 SHGRHDLDVSNEAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFP 603
Query: 184 QNTSIT 189
+N T
Sbjct: 604 KNKQST 609
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 185 NTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKR-----FK 239
N +T L FS+TE L + + C C EA K++++ +LP +L + LKR F
Sbjct: 907 NPHLTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRFVYTAFT 966
Query: 240 YMEQFNRHIKVSHRVVFPLE 259
Y R K + V +PLE
Sbjct: 967 YQSSMARRSKDTRSVEYPLE 986
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 318 LYDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDF-YGLTSDIQKS 376
+YDL VV H G+ GHYIS+ + F D KI+ +D S
Sbjct: 1005 MYDLTGVVCHSGNS-YFGHYISMGRLADF-----DSSKTKIEWRNFDDSTVARQSTSTLQ 1058
Query: 377 SETGYILFYQSRD 389
+E Y+LFY+ RD
Sbjct: 1059 TEDAYLLFYKMRD 1071
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 57.6 bits (133), Expect = 1e-08
Identities = 97/396 (24%), Positives = 152/396 (38%), Gaps = 59/396 (14%)
Query: 17 GNTCYSNSVLQALYFCRPFR----------EKVLEYKAKNKRTKETLLT---CLADLFYS 63
GN+C+ NS +QAL C F K ++Y E L L D
Sbjct: 151 GNSCFLNSTMQALSSCHSFALRCEQLYCLVRKNIDYFDNEASHSEVLCRKYRVLIDFLKI 210
Query: 64 IATQKKKVGS--IAPKKFIARLRKEKE-------EFDNYMQQDAHEFLNFLINHINEIIL 114
+A K+ S P+ A L+ +E +F N QQDAHEFL L I+++
Sbjct: 211 MAALTKRSNSSKTQPEIIEANLQTFRELIGMIRNDFANKNQQDAHEFLLMLFEAIDDVA- 269
Query: 115 AERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEH 174
+ + +N G++V P E F+ + + C C + +
Sbjct: 270 --------EYKADNEGDDV----KEAKQLNPI---EAFKFNVETCYVCKGCSKEEVRVDV 314
Query: 175 FFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALH 234
DL V + N S+ L T T KC +C+ +Q A R+ + P L ++
Sbjct: 315 RNDLAVHMRDNLSVQELLSSSFSTWTPIEK---KCSSCN-HQHAILSERITRFPECLVIN 370
Query: 235 LKRFKYM-EQFN-RHIKVSHRVVFPLELRLFNTKRDRSSEXXXXXXXXXXXXXXXXXXVI 292
L+R++ QF+ + I S F L++ + +
Sbjct: 371 LERYQLEGPQFSTKKINCSLEPSFELDISSLQKFPEIEKNGLEQSEKQQDSQYGQLLDRM 430
Query: 293 TVDVTVKPKKEKKNRKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVK--SHGFWLLF 350
+K E KN ++ D+ Y LVA + H G P GHYI+ + + WL
Sbjct: 431 KSCEIIKCC-ETKNIIMEE--KHDK-YSLVAAICHLGETPTNGHYIAYTREDTENSWLYC 486
Query: 351 DDDMVDKIDASAIEDFYGLTSDIQKSSETGYILFYQ 386
DD++ S I + I+ S GYILFY+
Sbjct: 487 SDDLIRPATRSEI------SLSIRTS---GYILFYE 513
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 186 TSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFN 245
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1028 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQG 1085
Query: 246 RHIKVSHRVVFPLE 259
R K V FPL+
Sbjct: 1086 RMGKCKRTVNFPLK 1099
Score = 41.9 bits (94), Expect = 8e-04
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYSIATQ 67
+GN CY N+ +Q L P + L+ K N R + T + A L +
Sbjct: 572 YGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLREMWAA 631
Query: 68 KKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS------- 120
KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 632 KKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKSLHPSPEE 688
Query: 121 -----TLKVQKNNSGENVTCNGSVPHNTEPTW----------VHEIFQGTLTSETRCLNC 165
+ K+ ++ + + E +W V ++F G L S C C
Sbjct: 689 SEGTDSNKLSDSSKKKEADKEEADEEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTC 748
Query: 166 ETVSSKDEHFFDLQVDVG 183
++ SS E F L + +G
Sbjct: 749 QSSSSVFEPFTSLSLPIG 766
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 186 TSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFN 245
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1031 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQG 1088
Query: 246 RHIKVSHRVVFPLE 259
R K V FPL+
Sbjct: 1089 RMGKCKRTVNFPLK 1102
Score = 41.9 bits (94), Expect = 8e-04
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYSIATQ 67
+GN CY N+ +Q L P + L+ K N R + T + A L +
Sbjct: 575 YGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLREMWAA 634
Query: 68 KKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS------- 120
KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 635 KKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKSLHPSPEE 691
Query: 121 -----TLKVQKNNSGENVTCNGSVPHNTEPTW----------VHEIFQGTLTSETRCLNC 165
+ K+ ++ + + E +W V ++F G L S C C
Sbjct: 692 SEGTDSNKLSDSSKKKEADKEEADEEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTC 751
Query: 166 ETVSSKDEHFFDLQVDVG 183
++ SS E F L + +G
Sbjct: 752 QSSSSVFEPFTSLSLPIG 769
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 186 TSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFN 245
+S+ HC++ FS ETL D +CD C K M + KLP L +HLKRF+++ +
Sbjct: 1028 SSLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQG 1085
Query: 246 RHIKVSHRVVFPLE 259
R K V FPL+
Sbjct: 1086 RMGKCKRTVNFPLK 1099
Score = 41.9 bits (94), Expect = 8e-04
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 16 FGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYSIATQ 67
+GN CY N+ +Q L P + L+ K N R + T + A L +
Sbjct: 572 YGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLREMWAA 631
Query: 68 KKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS------- 120
KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 632 KKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKSLHPSPEE 688
Query: 121 -----TLKVQKNNSGENVTCNGSVPHNTEPTW----------VHEIFQGTLTSETRCLNC 165
+ K+ ++ + + E +W V ++F G L S C C
Sbjct: 689 SEGTDSNKLSDSSKKKEADKEEADEEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTC 748
Query: 166 ETVSSKDEHFFDLQVDVG 183
++ SS E F L + +G
Sbjct: 749 QSSSSVFEPFTSLSLPIG 766
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 54.8 bits (126), Expect = 1e-07
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 17 GNTCYSNSVLQALY----FCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQ--KKK 70
GNTC+ ++ LQ L+ F +KV K N +++ ++ F S++
Sbjct: 30 GNTCFMSATLQCLFQTPGLAEVFTKKVFVSKV-NTQSRLGSKGVISAGFASLSDMIWNGT 88
Query: 71 VGSIAPKKFIARLRKEK-EEFDNYMQQDAHEFLNFLINHINEIILAERNQST-LKVQKN- 127
+I P +F+ + + Q DA EF FL++ ++E + NQ+ + ++N
Sbjct: 89 FTAIRPSRFLQLFSDTVYQPLSDGRQHDASEFQIFLLDALHE----DTNQAQRISFEQNY 144
Query: 128 NSGENVTCNGS----VPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVG 183
+ G + + + + V+ + SE RCL C S+ E + V++
Sbjct: 145 HGGAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSATFEENTIISVEIP 204
Query: 184 QNTS--ITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRF 238
N+S + CL+ L D+++ C C + + + ++ + P ++ +HLKRF
Sbjct: 205 SNSSCSLDMCLRSHFSQTKLDGDSRWNCPKCKEPRASTRTSKLWQPPPVMIIHLKRF 261
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 48.8 bits (111), Expect = 7e-06
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV----- 71
GNTC+ S Q L P RE L +N ++ L L ++ K +
Sbjct: 281 GNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGMWSGDY 340
Query: 72 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNS-- 129
SI P+KF + + + F+ Y QQDAHE + ++++ ++E + + + ++ ++
Sbjct: 341 ASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPYIEDSDEDAKL 400
Query: 130 --GENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHF 175
E + V + + + G L S C CE +S K + F
Sbjct: 401 PEAEYAAKSWEVYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPF 448
Score = 48.4 bits (110), Expect = 9e-06
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 177 DLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLK 236
++ V + + L F+ E L + + C C ++ A K++ + KLP IL LHLK
Sbjct: 689 EMTVSTRRKVLLQETLDWFTTKEQLGEQDSWYCPQCKKHERATKQLALWKLPEILILHLK 748
Query: 237 RFKYMEQFNRHIKVSHRVVFPL 258
RF+Y +++R K++ VV P+
Sbjct: 749 RFQY-TKWSRE-KLTWEVVIPV 768
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 303 EKKNRKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVK---SHGFWLLFDDDMVDKID 359
EK N + D P R Y LV+VV H GS PN+GH+++ K + WL DD + +
Sbjct: 475 EKDNMRGDA---PPRRYTLVSVVCHLGSSPNKGHHVAYTKKSLDNDGWLRCSDDKLRDVS 531
Query: 360 ASAIEDFYGLTSDIQKSSETGYILFY 385
+ ++ +SS GY+L+Y
Sbjct: 532 KENV-------ANAVRSS--GYVLYY 548
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 17 GNTCYSNSVLQALYFCRP 34
GN+CY NS LQA+ C P
Sbjct: 40 GNSCYYNSTLQAMSSCGP 57
>Z74033-5|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVK---SHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQK 375
Y LVAVV H G PN+GHY++ K + WL DD + + + + S+ +
Sbjct: 759 YSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRCSDDNIYAVSKNDV-------SEAIR 811
Query: 376 SSETGYILFYQ 386
SS GY++FY+
Sbjct: 812 SS--GYLMFYE 820
Score = 34.7 bits (76), Expect = 0.11
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 85 KEKEEFDNYMQQDAHEFLNFLINHINEII-LAERNQSTLKVQKNNSGENVTCNGSVPHNT 143
K EEF+N QQDAHEFL LI +++ + + +N T+ +N G +T N
Sbjct: 313 KINEEFNNDDQQDAHEFLLTLIGAVDDAMGVMSKNVKTI----DNVG--ITLN------- 359
Query: 144 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCN 203
P +I T+ C C K + DL V V S+ + F +
Sbjct: 360 -PARAFKIDVETMYV---CQGCSNEELKVDSRNDLGVSVMDGCSVQKLVSSFVKWSPI-- 413
Query: 204 DNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFK 239
+ +C +C ++ + R+ P L ++LKR++
Sbjct: 414 --EKECSSC-KHKISSSCERISTFPECLIINLKRYE 446
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 17 GNTCYSNSVLQALYFCRP 34
GN+CY NS +QA+ C P
Sbjct: 220 GNSCYYNSTMQAVSSCNP 237
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVK---SHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQK 375
Y LVAVV H G PN+GHY++ K + WL DD + + + + S+ +
Sbjct: 759 YSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRCSDDNIYAVSKNDV-------SEAIR 811
Query: 376 SSETGYILFYQ 386
SS GY++FY+
Sbjct: 812 SS--GYLMFYE 820
Score = 34.7 bits (76), Expect = 0.11
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 85 KEKEEFDNYMQQDAHEFLNFLINHINEII-LAERNQSTLKVQKNNSGENVTCNGSVPHNT 143
K EEF+N QQDAHEFL LI +++ + + +N T+ +N G +T N
Sbjct: 313 KINEEFNNDDQQDAHEFLLTLIGAVDDAMGVMSKNVKTI----DNVG--ITLN------- 359
Query: 144 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCN 203
P +I T+ C C K + DL V V S+ + F +
Sbjct: 360 -PARAFKIDVETMYV---CQGCSNEELKVDSRNDLGVSVMDGCSVQKLVSSFVKWSPI-- 413
Query: 204 DNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFK 239
+ +C +C ++ + R+ P L ++LKR++
Sbjct: 414 --EKECSSC-KHKISSSCERISTFPECLIINLKRYE 446
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 17 GNTCYSNSVLQALYFCRP 34
GN+CY NS +QA+ C P
Sbjct: 220 GNSCYYNSTMQAVSSCNP 237
>Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 42.7 bits (96), Expect = 4e-04
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 47/254 (18%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLADLFYSIATQK 68
GN CY NS LQ + FR+ + +++ + + + L D+FY++ T
Sbjct: 114 GNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQDIFYTLQTTP 173
Query: 69 -KKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERN-QSTLKVQK 126
+ + + RL E QQD+ EF N + + N + TLK K
Sbjct: 174 FNETDKTSNLGKLLRLNSE--------QQDSQEFGLKFFNALERCLPDHPNGKETLKRLK 225
Query: 127 NNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNT 186
++F G + C C S ++E L +++
Sbjct: 226 -----------------------DLFTGETCTRIVC-KCGQRSEREETAISLTLNIEGYC 261
Query: 187 SITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNR 246
++ L + E L + FKC C+ + K+ KLP ++ + L R+KY + +
Sbjct: 262 TLLDALDAYFGEEHL---DDFKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSKGRQ 318
Query: 247 HIKVSHRVVFPLEL 260
+K + +P E+
Sbjct: 319 KLKTP--MAYPREI 330
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 307 RKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMVDKI 358
R ++ P +YDL AV +H G+ GHY ++KS + W ++D+ V+ I
Sbjct: 337 RTNNSIPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAI 390
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 42.7 bits (96), Expect = 4e-04
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 47/254 (18%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLADLFYSIATQK 68
GN CY NS LQ + FR+ + +++ + + + L D+FY++ T
Sbjct: 114 GNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQDIFYTLQTTP 173
Query: 69 -KKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERN-QSTLKVQK 126
+ + + RL E QQD+ EF N + + N + TLK K
Sbjct: 174 FNETDKTSNLGKLLRLNSE--------QQDSQEFGLKFFNALERCLPDHPNGKETLKRLK 225
Query: 127 NNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNT 186
++F G + C C S ++E L +++
Sbjct: 226 -----------------------DLFTGETCTRIVC-KCGQRSEREETAISLTLNIEGYC 261
Query: 187 SITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNR 246
++ L + E L + FKC C+ + K+ KLP ++ + L R+KY + +
Sbjct: 262 TLLDALDAYFGEEHL---DDFKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSKGRQ 318
Query: 247 HIKVSHRVVFPLEL 260
+K + +P E+
Sbjct: 319 KLKTP--MAYPREI 330
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 307 RKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKS--HGFWLLFDDDMVDKI 358
R ++ P +YDL AV +H G+ GHY ++KS + W ++D+ V+ I
Sbjct: 337 RTNNSIPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAI 390
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 42.3 bits (95), Expect = 6e-04
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 319 YDLVAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMV 355
Y L+ ++ H GS P+ GHY++ + G W+LF+D+ V
Sbjct: 733 YKLIGMISHMGSRPDSGHYVAHMLKEGKWVLFNDEKV 769
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 152 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 210
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1886 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1944
Query: 211 NCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVV-FPLEL 260
C + R +LP + + LKRF Y + N I+ +++ FP E+
Sbjct: 1945 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY-DLVNNMIRKDNQLFRFPFEI 1994
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 152 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 210
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1883 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1941
Query: 211 NCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVV-FPLEL 260
C + R +LP + + LKRF Y + N I+ +++ FP E+
Sbjct: 1942 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY-DLVNNMIRKDNQLFRFPFEI 1991
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 152 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 210
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1886 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1944
Query: 211 NCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVV-FPLEL 260
C + R +LP + + LKRF Y + N I+ +++ FP E+
Sbjct: 1945 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY-DLVNNMIRKDNQLFRFPFEI 1994
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 152 FQGTLTSETRCLNC-ETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 210
F G + E C C S DE F + + + + ++ L+ F + +N + C+
Sbjct: 1883 FFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD-NLEEALENFLAAHVMEGENAYHCE 1941
Query: 211 NCSSYQEAQKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVV-FPLEL 260
C + R +LP + + LKRF Y + N I+ +++ FP E+
Sbjct: 1942 KCDEKKTTLNRTSFLELPSTMTIQLKRFTY-DLVNNMIRKDNQLFRFPFEI 1991
>AL032631-12|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 37.5 bits (83), Expect = 0.016
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 314 NPDRL--YDLVAVVVHCGSGPNRGHYISIVK---SHGFWLLFDDDMVDKIDASAIEDFYG 368
N D++ Y L A + H G P+RGHY+++ + + WL D +V I + +
Sbjct: 905 NTDQIAKYRLFAAICHIGEFPDRGHYLALTRDLYNPSKWLDCSDAVVRDISSGDV----- 959
Query: 369 LTSDIQKSSETGYILFY 385
I+ +S +GY+LFY
Sbjct: 960 ----IKDASSSGYLLFY 972
Score = 31.9 bits (69), Expect = 0.80
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 21/118 (17%)
Query: 17 GNTCYSNSVLQALYFC-----------RPFREKVLEYKAKNKRTKETLL-TCL------A 58
GN+CY NS +QAL C R LE + + R K + +CL +
Sbjct: 288 GNSCYFNSTMQALSSCPSLVSRFEMLHRLRHGNYLECPSYDLRPKFAVFESCLRMMVKLS 347
Query: 59 DLFYSIATQKKKVGSIAPKKFI-ARLR--KEKEEFDNYMQQDAHEFLNFLINHINEII 113
D + ++ ++ S + + RL+ + +EFDN Q+DAHE+L L++ +++I+
Sbjct: 348 DRMENPHLKEYRLPSFSETELANTRLKIGRVVKEFDNNDQKDAHEYLTELLSCVDDIM 405
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 35.9 bits (79), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 314 NPDRLYDLVAVVVHCGSGPNRGHYISIV--KSHGFWLLFDDDMVDKI 358
N Y L ++VH GS GH+ S V W FDDD V +
Sbjct: 274 NSSCYYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNV 320
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 35.9 bits (79), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 314 NPDRLYDLVAVVVHCGSGPNRGHYISIV--KSHGFWLLFDDDMVDKI 358
N Y L ++VH GS GH+ S V W FDDD V +
Sbjct: 321 NSSCYYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNV 367
>Z70265-2|CAA94200.1| 388|Caenorhabditis elegans Hypothetical
protein C05A9.3 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.20
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 118 NQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSK 171
N ST +K SG N G + N P V ++ T T C+NC+T S+K
Sbjct: 14 NFSTTSFRKKLSGLNANITGFIDGNNRPVPVW-VYDRIGTYRTICINCQTSSTK 66
>U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical
protein T22F3.2a protein.
Length = 376
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 150 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN--TSITHCLKCFSDTETLCNDNK- 206
++F ++ +E +C C+ EH + V + + + +H +K + L ++K
Sbjct: 180 DLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLRKDPSGKSHSIKELM--QALFTESKI 237
Query: 207 --FKCDNCSSYQEAQKRMRVKKLPLILALHLKRFKY 240
+ C C +A + + + P IL +H+ RF +
Sbjct: 238 FGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSF 273
>U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical
protein B0218.5 protein.
Length = 367
Score = 29.5 bits (63), Expect = 4.3
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 36 REKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQ 95
REKVL+YK K+ RT + + +ADLFY+ P K R+ K +E D Y +
Sbjct: 242 REKVLKYK-KDVRTDKEI---MADLFYN-----------CPLKEFERILKYVDELDFYSE 286
Query: 96 QDAHEFLNFLINH 108
D ++F+ + H
Sbjct: 287 PD-YKFVYCCLQH 298
>AF016430-9|AAB65374.1| 467|Caenorhabditis elegans Hypothetical
protein C05C8.7 protein.
Length = 467
Score = 29.5 bits (63), Expect = 4.3
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 293 TVDVTVKPKKEKKNR--KSDDAVNPDR------LYDLVAVVVHCGSGPNRGHYISIVKSH 344
T+ + V P KE+ R + D PDR Y L + CG P R ++
Sbjct: 97 TLSLQVHPTKEQARRLHEKDPIHYPDRNHKPELAYALTRFELLCGFRPAREILQNLQTFP 156
Query: 345 GFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSSE 378
F LLF D K I+ L S QKS+E
Sbjct: 157 SFRLLFGGDTYAKPLEDCIQQMKDLNSVDQKSTE 190
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 29.5 bits (63), Expect = 4.3
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 17 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAP 76
GNTCY N++LQ L C F + K ++ + + L++L + + + ++
Sbjct: 51 GNTCYMNALLQGLASCPSFVGWLKSLKPQDIGIQGGFVDHLSNLLHLL--NEPTGSTLTA 108
Query: 77 KKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCN 136
+ + L+ ++ D +E N + + + +S+ ++ N S EN C+
Sbjct: 109 QSIVESLKAHGWSITVGVEHDLYELFNVFVTTWEDEL-----KSSRRILMNQSIEN--CH 161
Query: 137 GSVPHNTE 144
S + E
Sbjct: 162 SSSSEDDE 169
>AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical
protein F14H12.2 protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 9 LNFQHRMFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQK 68
L Q+R + N C+ N++L L+ F +K +E++ + E L ++F
Sbjct: 67 LLLQNRPYKNLCWLNTMLNVLFKSTSFSKKFIEWQNDKSISNE-----LGNIFNKNTKSA 121
Query: 69 KKVGSIAPKKF 79
K+ S+ K F
Sbjct: 122 SKLRSMMDKDF 132
>Z70267-4|CAA94210.1| 314|Caenorhabditis elegans Hypothetical
protein K04C1.3 protein.
Length = 314
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 75 APKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS 120
+P+ F ++LR + + N+ FL +++H + +L E S
Sbjct: 10 SPQSFSSKLRSTENQAANHKGHTLSHFLKIVVHHTQDFVLEETPSS 55
>U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical
protein T22F3.2b protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 150 EIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQN--TSITHCLKCFSDTETLCNDNK- 206
++F ++ +E +C C+ EH + V + + + +H +K + L ++K
Sbjct: 180 DLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLRKDPSGKSHSIKELM--QALFTESKI 237
Query: 207 --FKCDNCSSYQEAQKRMRVKKLPLILALHLKRF 238
+ C C +A + + + P IL +H+ RF
Sbjct: 238 FGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRF 271
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,881,152
Number of Sequences: 27539
Number of extensions: 421629
Number of successful extensions: 1336
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 92
length of query: 392
length of database: 12,573,161
effective HSP length: 83
effective length of query: 309
effective length of database: 10,287,424
effective search space: 3178814016
effective search space used: 3178814016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -