GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001053-TA|BGIBMGA001053-PA|undefined
         (67 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            20   7.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            20   7.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 5/19 (26%), Positives = 13/19 (68%)

Query: 48  WKLMETHSLPDLGRVETSW 66
           W+L ++ +LP+  +  ++W
Sbjct: 168 WQLYDSPTLPESWKFNSTW 186


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 5/19 (26%), Positives = 13/19 (68%)

Query: 48  WKLMETHSLPDLGRVETSW 66
           W+L ++ +LP+  +  ++W
Sbjct: 168 WQLYDSPTLPESWKFNSTW 186


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.129    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,304
Number of Sequences: 2123
Number of extensions: 1917
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 67
length of database: 516,269
effective HSP length: 45
effective length of query: 22
effective length of database: 420,734
effective search space:  9256148
effective search space used:  9256148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)