Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001052-TA|BGIBMGA001052-PA|IPR002557|Chitin binding
Peritrophin-A
         (183 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.44 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.44 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.44 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.1  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 138 CSQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNIPE 176
           C Q    ++L  + +  PYVP+ K  +  +  EE N+ E
Sbjct: 266 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNVEE 304


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 138 CSQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNIPE 176
           C Q    ++L  + +  PYVP+ K  +  +  EE N+ E
Sbjct: 181 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNVEE 219


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 138 CSQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNIPE 176
           C Q    ++L  + +  PYVP+ K  +  +  EE N+ E
Sbjct: 500 CPQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNVEE 538


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 136 VDCSQAIEHYKLNADPLKNPYVP 158
           +DCS   E+Y+L     KN   P
Sbjct: 963 IDCSTQSEYYELEVKDQKNGKPP 985


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 14  TGALLCGVVSDAA 26
           TGAL  G+VSD A
Sbjct: 311 TGALFFGLVSDTA 323


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.138    0.452 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,172
Number of Sequences: 429
Number of extensions: 2900
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 183
length of database: 140,377
effective HSP length: 54
effective length of query: 129
effective length of database: 117,211
effective search space: 15120219
effective search space used: 15120219
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)