Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001052-TA|BGIBMGA001052-PA|IPR002557|Chitin binding
Peritrophin-A
(183 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 31 0.35
At4g38560.1 68417.m05459 expressed protein 30 0.81
At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory su... 29 1.9
At4g16330.1 68417.m02475 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.9
At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory su... 29 1.9
At1g36990.1 68414.m04611 expressed protein contains PS00070: Ald... 29 2.5
At5g44320.1 68418.m05427 eukaryotic translation initiation facto... 28 3.2
At2g29910.2 68415.m03633 F-box family protein contains F-box dom... 28 4.3
At2g29910.1 68415.m03632 F-box family protein contains F-box dom... 28 4.3
At4g20980.1 68417.m03037 eukaryotic translation initiation facto... 27 7.5
At4g19430.1 68417.m02859 expressed protein 27 7.5
At1g21326.1 68414.m02666 VQ motif-containing protein contains PF... 27 9.9
At1g21320.1 68414.m02664 VQ motif-containing protein contains PF... 27 9.9
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 124 DQTKFACDWWYNV-DCSQAIEHYKLNADPL-KNPYVPK 159
DQ ++ACD W D S +++ Y L++ P+ + YVPK
Sbjct: 378 DQGRYACDSWNTPRDSSFSVDRYGLSSAPVEREQYVPK 415
>At4g38560.1 68417.m05459 expressed protein
Length = 521
Score = 30.3 bits (65), Expect = 0.81
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 139 SQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNI 174
+Q + H L + LK+P + +P I Q QP +NI
Sbjct: 196 TQPVPHRSLESAGLKSPQKGETRPHIPQTQPTSFNI 231
>At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26s proteasome regulatory subunit s12
(proteasome subunit p40) (mov34 protein) SP:P26516 from
[Mus musculus]; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 308
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 133 WYNVDCSQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNIPEEAYF 180
WY+ + L+ L N YVP I QP+E IP +AY+
Sbjct: 101 WYST--GPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYY 146
>At4g16330.1 68417.m02475 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to flavonone-3-hydroxylase
(naringenin,2-oxoglutarate 3-dioxygenase) from Malus
domestica [SP|Q06942], Pyrus communis [GI:20269881];
contains Pfam domain PF03171, 2OG-Fe(II) oxygenase
superfamily
Length = 258
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 66 DYPIYHSVPETRFSCEHVPIHPGMYANV 93
DY +H+ P +R + H PIHP Y V
Sbjct: 50 DYFDHHTFPSSRRNPSHWPIHPSDYRQV 77
>At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26S proteasome regulatory subunit S12
(MOV34) SP:P26516 from [Mus musculus]
Length = 310
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 133 WYNVDCSQAIEHYKLNADPLKNPYVPKQKPEIHQEQPEEYNIPEEAYF 180
WY+ + L+ L N YVP I QP+E IP +AY+
Sbjct: 101 WYST--GPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYY 146
>At1g36990.1 68414.m04611 expressed protein contains PS00070:
Aldehyde dehydrogenases cysteine active site; similar to
high molecular mass nuclear antigen (GI:2754696) [Gallus
gallus];similar to streptococcal hemagglutinin
(GI:8885520) [Streptococcus gordonii] similar to
proteophosphoglycan (GI:5420389) [Leishmania major]
Length = 581
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 4 EMGKAVLRALTGALLCGVVSDAAYLQRYEPYGLQFEQALIRKPLREHEKPQ 54
E+ + +A TG+L + + P GL +AL++ P R H PQ
Sbjct: 236 EVPNVIEKACTGSLTSPKANAVSAGTLTGPSGLNMAEALVQAPARTHTPPQ 286
>At5g44320.1 68418.m05427 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 588
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 145 YKLNADPLKNPYVPKQKPEIHQEQPEEYN 173
Y++ AD N YV + PE Q QP E N
Sbjct: 534 YEVPADAFDNDYVEEPLPEDEQVQPPEEN 562
>At2g29910.2 68415.m03633 F-box family protein contains F-box domain
Pfam:PF00646
Length = 335
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 107 REGHQGASFLCTNGTLFDQTKFACDWWYNVDCSQAIE 143
RE H G F N D + + D WY VD +E
Sbjct: 216 REAHDGCWFRTPNLVYLDYSSYVPD-WYEVDLGSLVE 251
>At2g29910.1 68415.m03632 F-box family protein contains F-box domain
Pfam:PF00646
Length = 352
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 107 REGHQGASFLCTNGTLFDQTKFACDWWYNVDCSQAIE 143
RE H G F N D + + D WY VD +E
Sbjct: 216 REAHDGCWFRTPNLVYLDYSSYVPD-WYEVDLGSLVE 251
>At4g20980.1 68417.m03037 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 591
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 145 YKLNADPLKNPYVPKQKPEIHQEQPEEYN 173
Y++ D +N YV + PE Q QP E N
Sbjct: 539 YEVPPDAFENDYVEEPLPEDEQVQPTEEN 567
>At4g19430.1 68417.m02859 expressed protein
Length = 160
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 142 IEHYKLNADPLKNPYVPKQKPEIHQEQPEE 171
I H K+N+ PL NP + + P + +E+ +
Sbjct: 54 IYHNKINSHPLTNPLLFIEDPSVKEEETNQ 83
>At1g21326.1 68414.m02666 VQ motif-containing protein contains
PF05678: VQ motif
Length = 239
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 144 HYKLNADPLKNPYVPKQKPEIHQEQPEEYNIP 175
H + PL P+ Q P+ HQ++P + P
Sbjct: 26 HKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPP 57
>At1g21320.1 68414.m02664 VQ motif-containing protein contains
PF05678: VQ motif
Length = 235
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 144 HYKLNADPLKNPYVPKQKPEIHQEQPEEYNIP 175
H + PL P+ Q P+ HQ++P + P
Sbjct: 26 HKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPP 57
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.138 0.452
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,905,487
Number of Sequences: 28952
Number of extensions: 212273
Number of successful extensions: 395
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 386
Number of HSP's gapped (non-prelim): 13
length of query: 183
length of database: 12,070,560
effective HSP length: 77
effective length of query: 106
effective length of database: 9,841,256
effective search space: 1043173136
effective search space used: 1043173136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -