Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001051-TA|BGIBMGA001051-PA|IPR004045|Glutathione
S-transferase, N-terminal, IPR012336|Thioredoxin-like fold
         (68 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   1.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   1.1  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    20   2.0  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    20   2.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    20   2.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   2.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   4.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   4.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)

Query: 28   NVKYVDVDLLAEDHLKEEFLKLNP 51
            N+ Y++    +E H+ +E+L+L P
Sbjct: 1304 NITYIEET--SEVHISKEYLQLEP 1325


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 2/24 (8%)

Query: 28   NVKYVDVDLLAEDHLKEEFLKLNP 51
            N+ Y++    +E H+ +E+L+L P
Sbjct: 1304 NITYIEET--SEVHISKEYLQLEP 1325


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 212

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 34 VDLLAEDHLKEEFLKLNP 51
          V L+ ED L  +F K+ P
Sbjct: 31 VPLIGEDLLVNDFFKVKP 48


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 101

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 34 VDLLAEDHLKEEFLKLNP 51
          V L+ ED L  +F K+ P
Sbjct: 46 VPLIGEDLLVNDFFKVKP 63


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 34  VDLLAEDHLKEEFLKLNP 51
           V L+ ED L  +F K+ P
Sbjct: 264 VPLIGEDLLVNDFFKVKP 281


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 34  VDLLAEDHLKEEFLKLNP 51
           V L+ ED L  +F K+ P
Sbjct: 264 VPLIGEDLLVNDFFKVKP 281


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 34  VDLLAEDHLKEEFLKLNP 51
           V L+ ED L  +F K+ P
Sbjct: 264 VPLIGEDLLVNDFFKVKP 281


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 39   EDHLKEEFLKLNP 51
            E H+ +E+L+L P
Sbjct: 1313 EVHISKEYLQLEP 1325


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 39   EDHLKEEFLKLNP 51
            E H+ +E+L+L P
Sbjct: 1313 EVHISKEYLQLEP 1325


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,303
Number of Sequences: 317
Number of extensions: 557
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 68
length of database: 114,650
effective HSP length: 44
effective length of query: 24
effective length of database: 100,702
effective search space:  2416848
effective search space used:  2416848
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.2 bits)
S2: 35 (18.2 bits)