Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001051-TA|BGIBMGA001051-PA|IPR004045|Glutathione
S-transferase, N-terminal, IPR012336|Thioredoxin-like fold
(68 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 44 2e-05
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 36 0.004
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 32 0.066
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 32 0.066
03_01_0249 - 1935355-1935827,1936129-1936330 28 0.81
11_06_0234 + 21574380-21575197,21576131-21576190,21578320-215800... 27 1.9
06_01_0263 + 1936927-1936936,1937031-1937305,1937727-1938079,193... 27 1.9
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 27 2.5
10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335 26 3.3
10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317 26 3.3
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 26 3.3
01_01_0740 - 5756491-5757054,5757247-5757407,5757580-5757607 26 3.3
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 26 4.3
08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899 25 5.7
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 25 5.7
06_01_0221 + 1690978-1692171,1692265-1692276 25 5.7
08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527 25 7.5
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 25 10.0
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 25 10.0
>11_06_0225 +
21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 2 VLTLYKMDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDD 61
+L +Y S P RA+ ++ +N + + V VDL +HL EF K+NP +P + D
Sbjct: 4 LLKVYADRRSQPSRAI-IIFCRVNRIDFEEVTVDLFKREHLSPEFKKINPMGQVPAIVDG 62
Query: 62 KFVIWDR 68
+F +++R
Sbjct: 63 RFRLFER 69
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 23 ALNIPNVKYV--DVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWD 67
ALN+ ++Y V+LL +H EF+K+NP +P L D VI D
Sbjct: 31 ALNLKGLEYEYKAVNLLKGEHSDPEFMKVNPMKFVPALVDGDAVIGD 77
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 31.9 bits (69), Expect = 0.066
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 18 YMVIEALNIPNV--KYVDVDLLAEDHLKEEFLKLNPQHTIPMLTD-DKFVIWD 67
Y V AL++ + +Y ++LLA + EF KLNP +P L D D V+ D
Sbjct: 38 YRVRIALSLKGLDYEYKPINLLANEQSHPEFEKLNPMKYVPALVDGDDTVVVD 90
>01_07_0080 -
40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 31.9 bits (69), Expect = 0.066
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 3 LTLYKMDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDK 62
L +Y M S V V V+ + + V VDL H + FL LNP IP+L D
Sbjct: 8 LRVYGMALSANVVRVATVLNEKGL-DFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGD 66
Query: 63 FVIWD 67
V+++
Sbjct: 67 EVLYE 71
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 28.3 bits (60), Expect = 0.81
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 3 LTLYKMDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDK 62
+T+Y SP V V + ++P + VD+ +H FLKL P +P D
Sbjct: 5 VTVYGPMISPAVARVAACLLEKDVP-FQVEPVDMSKGEHKSPSFLKLQPFGQVPAFKDSL 63
Query: 63 FVIWD 67
+++
Sbjct: 64 TTVFE 68
>11_06_0234 +
21574380-21575197,21576131-21576190,21578320-21580053,
21581859-21582006
Length = 919
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 6 YKMDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVI 65
+ +D S P R + ++++ IP++ ++++ LLA + + L + P+ + + D +
Sbjct: 764 FYVDGSLPRRPTW--VDSVRIPHLSHLNLHLLAVEQRDLDALAMMPELRVLEVNSDLSIS 821
Query: 66 W 66
W
Sbjct: 822 W 822
>06_01_0263 +
1936927-1936936,1937031-1937305,1937727-1938079,
1938598-1938715,1938823-1938946,1939389-1939608,
1939948-1940017,1940083-1940136,1940536-1940604,
1941138-1941194,1941503-1941575,1942037-1942080,
1942629-1942751,1943092-1943321,1943552-1943660,
1944196-1944339,1944443-1944604,1944921-1945197,
1945326-1945486,1945591-1945782,1946789-1946971,
1946986-1947063,1947187-1947366,1947476-1947562
Length = 1130
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 18 YMVIEALNIPNVKYVDVDLLAEDHLKEEF 46
Y+ ++ L +P+ K+VD+ L E+HL F
Sbjct: 652 YLRMKPLRLPS-KFVDIKFLVENHLNSAF 679
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 28 NVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWD 67
N+K +D + A ++ K+NP +P L D F I D
Sbjct: 28 NLKGIDYEYRAVTRGDPDYGKINPIKYVPALVDGDFTISD 67
>10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335
Length = 227
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 24 LNIPNVKYVDVDLLAED-HLKEEFLKLNPQHTIPMLTDDKFV 64
+N+P Y +++ + +D H EF L + PM DD F+
Sbjct: 103 INVPIRWYDEMEFIFQDKHATGEFNVLQTPYDHPMTEDDDFI 144
>10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317
Length = 250
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 24 LNIPNVKYVDVDLLAED-HLKEEFLKLNPQHTIPMLTDDKFV 64
+N+P Y +++ + +D H EF L + PM DD F+
Sbjct: 72 INVPIRWYDEMEFIFQDKHATGEFNVLQTPYDHPMTEDDDFI 113
>01_04_0030 -
15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 11 SPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWD 67
S V V + +E + + V+VD +H E LK NP IP D +++
Sbjct: 12 STNVARVLLCLEEVGA-EYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFE 67
>01_01_0740 - 5756491-5757054,5757247-5757407,5757580-5757607
Length = 250
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 24 LNIPNVKYVDVDLLAED-HLKEEFLKLNPQHTIPMLTDDKFV 64
+N+P Y +++ + +D H EF L + PM DD F+
Sbjct: 72 INVPIRWYDEMEFIFQDKHATGEFNVLQTPYDHPMTEDDDFI 113
>10_08_1005 - 22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 32 VDVDLLAEDHLKEEFLKLNPQHTI-PMLTDD 61
V ++LA + F +++PQH++ P L+DD
Sbjct: 1356 VSDEILANTQARVSFQEVSPQHSVRPKLSDD 1386
>08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899
Length = 712
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 24 LNIPNVKYVDVDLLAEDHLKEEFLKL 49
L+ P +V++DL EDH+ EF L
Sbjct: 574 LDKPEPIHVEMDLFEEDHIGREFCYL 599
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 25.4 bits (53), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 8 MDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKL 49
MDA + V+ I+AL+ + + LL +DH ++E ++L
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRL 42
>06_01_0221 + 1690978-1692171,1692265-1692276
Length = 401
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 9 DASPPVRAVYMVIEALNIPNVKYVDVD 35
D PP +A M++ +LN VK D D
Sbjct: 36 DNLPPPQAAAMLLRSLNATKVKLYDAD 62
>08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527
Length = 710
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 22 EALNIPNVKYVDVDLLAEDHLKEEFLKL 49
E L+ P +V++DLL DH EF L
Sbjct: 570 EILDKPEPIHVEMDLLQNDHRGREFCYL 597
>01_04_0035 +
15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 24.6 bits (51), Expect = 10.0
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 7 KMDASPPVRAVYMVIEALNIPNVKY--VDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFV 64
K+ S P V V+ L Y VDVD +H + L NP +P D +
Sbjct: 5 KVFGSAPFTNVARVLLCLEEVGADYEIVDVDFGDREHKGPDHLARNPFGQVPAFQDGDLM 64
Query: 65 IWD 67
+++
Sbjct: 65 LFE 67
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 24.6 bits (51), Expect = 10.0
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 3 LTLYKMDASPPVRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDK 62
+ +Y SP + V + +E + V + DH + E L NP IP+L D
Sbjct: 4 MKVYGWVVSPWMARVLVALEEAGA-EYEVVPMSRSGGDHRRPEHLARNPFGEIPVLEDGD 62
Query: 63 FVIW 66
++
Sbjct: 63 LTLY 66
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.140 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,982,890
Number of Sequences: 37544
Number of extensions: 58780
Number of successful extensions: 135
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 124
Number of HSP's gapped (non-prelim): 19
length of query: 68
length of database: 14,793,348
effective HSP length: 48
effective length of query: 20
effective length of database: 12,991,236
effective search space: 259824720
effective search space used: 259824720
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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