Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001051-TA|BGIBMGA001051-PA|IPR004045|Glutathione
S-transferase, N-terminal, IPR012336|Thioredoxin-like fold
(68 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016441-2|AAB65912.2| 417|Caenorhabditis elegans Hypothetical ... 26 3.7
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 25 4.9
Z48583-4|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 25 4.9
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 25 4.9
U88173-7|AAK21383.2| 361|Caenorhabditis elegans Hypothetical pr... 25 6.5
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 25 6.5
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z66521-8|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 25 8.6
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 25 8.6
AC199169-13|ABO33252.1| 103|Caenorhabditis elegans Hypothetical... 25 8.6
>AF016441-2|AAB65912.2| 417|Caenorhabditis elegans Hypothetical
protein M03F8.5 protein.
Length = 417
Score = 25.8 bits (54), Expect = 3.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 43 KEEFLKLNPQHTIPMLTDDKFVI 65
+++F+ LN Q +P++ D FVI
Sbjct: 164 RKQFMGLNMQEKLPLVVDGSFVI 186
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 25.4 bits (53), Expect = 4.9
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 PPVRAVYMVIEALNIPNVKYVDVDLLAED 40
PPV + + + +++ N+ ++D D+LA D
Sbjct: 314 PPVGGYWKIRDRVDLLNLDHIDDDVLAND 342
>Z48583-4|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 25.4 bits (53), Expect = 4.9
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 PPVRAVYMVIEALNIPNVKYVDVDLLAED 40
PPV + + + +++ N+ ++D D+LA D
Sbjct: 314 PPVGGYWKIRDRVDLLNLDHIDDDVLAND 342
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 LLAEDHLKEEFLKLNPQHTIPMLTDDKFV 64
LL + H+ E+F L+P H + TD K V
Sbjct: 185 LLNDIHISEDFYGLSPLHQAIINTDCKLV 213
>U88173-7|AAK21383.2| 361|Caenorhabditis elegans Hypothetical
protein F46F11.6 protein.
Length = 361
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 19 MVIEALNIPNVKYVDVDLLAEDH 41
+V +AL P K D+ LLA DH
Sbjct: 163 LVTKALTAPKNKGQDISLLANDH 185
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 3 LTLYKMDASPPVRAVYMVIEALNIPNVKYV 32
L L++ +P + A + L+IPNVK+V
Sbjct: 470 LDLFRTGTAPILVATAVAARGLDIPNVKHV 499
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 15 RAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFL 47
+AV VI NIPN + + VD +EFL
Sbjct: 72 KAVRQVISTQNIPNSEDMRVDSRKSSGFTQEFL 104
>Z66521-8|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 14 VRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIW 66
+ A ++ E+L + V + DVD+ +D P+H +++ + +W
Sbjct: 211 MNAAFIFAESLGVDCVVFHDVDMFPQDDRNPYSCPPGPRHLGAFVSNLGYQLW 263
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 14 VRAVYMVIEALNIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIW 66
+ A ++ E+L + V + DVD+ +D P+H +++ + +W
Sbjct: 211 MNAAFIFAESLGVDCVVFHDVDMFPQDDRNPYSCPPGPRHLGAFVSNLGYQLW 263
>AC199169-13|ABO33252.1| 103|Caenorhabditis elegans Hypothetical
protein F38A1.13 protein.
Length = 103
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 19 MVIEALNIPNVKYVDVDLLAEDHLK-EEFLKLN 50
M + ++N+P +Y V L +DHL + F LN
Sbjct: 1 MELPSMNVPFSRYCWVTLTIQDHLPIDSFRSLN 33
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.140 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,731,523
Number of Sequences: 27539
Number of extensions: 55235
Number of successful extensions: 139
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 129
Number of HSP's gapped (non-prelim): 11
length of query: 68
length of database: 12,573,161
effective HSP length: 48
effective length of query: 20
effective length of database: 11,251,289
effective search space: 225025780
effective search space used: 225025780
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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