Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
         (94 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   2.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   2.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   5.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   5.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   5.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   5.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   5.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   8.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 14  ICAVEGVYPKPELNILVGNRLLIDTKSSI 42
           I     + P P + +  G++++ID ++ I
Sbjct: 164 ILTANRMIPGPSIQVCEGDKVVIDVENHI 192


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 14  ICAVEGVYPKPELNILVGNRLLIDTKSSI 42
           I     + P P + +  G++++ID ++ I
Sbjct: 164 ILTANRMIPGPSIQVCEGDKVVIDVENHI 192


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/30 (23%), Positives = 16/30 (53%)

Query: 14  ICAVEGVYPKPELNILVGNRLLIDTKSSIN 43
           I  V    P P + + +G+ ++ID  + ++
Sbjct: 98  IIVVNRKMPGPSVEVCLGDEVIIDVVNHLS 127


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 82  KKRDLFYRGW 91
           + R LF+RGW
Sbjct: 210 QSRGLFHRGW 219


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 82  KKRDLFYRGW 91
           + R LF+RGW
Sbjct: 210 QSRGLFHRGW 219


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 82  KKRDLFYRGW 91
           + R LF+RGW
Sbjct: 210 QSRGLFHRGW 219


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 82  KKRDLFYRGW 91
           + R LF+RGW
Sbjct: 210 QSRGLFHRGW 219


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 82  KKRDLFYRGW 91
           + R LF+RGW
Sbjct: 210 QSRGLFHRGW 219


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 68  LLCEMQVPLANYYSKKRDLFYRGWYC 93
           L+CE      + +   RD++    YC
Sbjct: 624 LVCENHTVKVSDFGLSRDVYQDNVYC 649


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,753
Number of Sequences: 317
Number of extensions: 815
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 94
length of database: 114,650
effective HSP length: 48
effective length of query: 46
effective length of database: 99,434
effective search space:  4573964
effective search space used:  4573964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)