GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
         (94 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    22   4.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    21   5.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   7.6  

>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 4   DRLDEDYLNIICAVEGVYPKPEL 26
           +RL++  + +ICA+E V  K E+
Sbjct: 105 ERLNKTKMEVICAMECVGRKKEV 127


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 22  PKPELNILVGNRLLIDTKSS 41
           P P+  +L+G+R++  T SS
Sbjct: 443 PSPDYAMLIGSRVIQRTPSS 462


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 34  LLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCEMQVPLA 77
           +L+  + S+  +      L     N+ S     ELL E+Q  LA
Sbjct: 274 VLVVKEKSLEYLSNEIVVLEEKQSNLESAGRMGELLSELQAKLA 317


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,566
Number of Sequences: 2123
Number of extensions: 3437
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 94
length of database: 516,269
effective HSP length: 54
effective length of query: 40
effective length of database: 401,627
effective search space: 16065080
effective search space used: 16065080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)